RNA–Protein interactions for RNA: ENST00000596250.5

SOX2-OT-225, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 610 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-225ENST00000596250 MYH3P11055 1940 aa17.08■□□□□ 0.33
SOX2-OT-225ENST00000596250 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 AOC3Q16853 763 aa17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 POLLQ9UGP5 575 aa17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 MINPP1Q9UNW1 487 aa17.08■□□□□ 0.32
SOX2-OT-225ENST00000596250 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 GNAI3P08754 354 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 RLBP1P12271 317 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
SOX2-OT-225ENST00000596250 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 FZD9O00144 591 aa17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 MPHOSPH8Q99549 860 aa17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
SOX2-OT-225ENST00000596250 XDHP47989 1333 aa17.05■□□□□ 0.32
SOX2-OT-225ENST00000596250 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
SOX2-OT-225ENST00000596250 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
SOX2-OT-225ENST00000596250 UFL1O94874 794 aa17.05■□□□□ 0.32
SOX2-OT-225ENST00000596250 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
SOX2-OT-225ENST00000596250 NMRK2Q9NPI5 230 aa17.05■□□□□ 0.32
SOX2-OT-225ENST00000596250 GGA1Q9UJY5 639 aa17.05■□□□□ 0.32
SOX2-OT-225ENST00000596250 KDM2BQ8NHM5 1336 aa17.04■□□□□ 0.32
SOX2-OT-225ENST00000596250 AAMPQ13685 434 aa17.04■□□□□ 0.32
SOX2-OT-225ENST00000596250 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
SOX2-OT-225ENST00000596250 NIM1KQ8IY84 436 aa17.04■□□□□ 0.32
SOX2-OT-225ENST00000596250 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-225ENST00000596250 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
SOX2-OT-225ENST00000596250 CHRNDQ07001 517 aa17.03■□□□□ 0.32
SOX2-OT-225ENST00000596250 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
SOX2-OT-225ENST00000596250 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
SOX2-OT-225ENST00000596250 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
SOX2-OT-225ENST00000596250 CCDC88AQ3V6T2 1871 aa17.02■□□□□ 0.32
SOX2-OT-225ENST00000596250 KIF3CO14782 793 aa17.02■□□□□ 0.32
SOX2-OT-225ENST00000596250 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
SOX2-OT-225ENST00000596250 ATP2B4P23634 1241 aa17.02■□□□□ 0.32
SOX2-OT-225ENST00000596250 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
SOX2-OT-225ENST00000596250 EYA3Q99504 573 aa17.02■□□□□ 0.32
SOX2-OT-225ENST00000596250 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
SOX2-OT-225ENST00000596250 SPEF2Q9C093 1822 aa17.02■□□□□ 0.31
SOX2-OT-225ENST00000596250 GNAI2P04899 355 aa17.01■□□□□ 0.31
SOX2-OT-225ENST00000596250 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
SOX2-OT-225ENST00000596250 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
SOX2-OT-225ENST00000596250 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
SOX2-OT-225ENST00000596250 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
SOX2-OT-225ENST00000596250 YDJCA8MPS7 323 aa17■□□□□ 0.31
SOX2-OT-225ENST00000596250 POTECB2RU33 542 aa17■□□□□ 0.31
SOX2-OT-225ENST00000596250 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
SOX2-OT-225ENST00000596250 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
SOX2-OT-225ENST00000596250 HELBQ8NG08 1087 aaPredicted RBP17■□□□□ 0.31
SOX2-OT-225ENST00000596250 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
SOX2-OT-225ENST00000596250 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
SOX2-OT-225ENST00000596250 CNNM1Q9NRU3 951 aa17■□□□□ 0.31
SOX2-OT-225ENST00000596250 SNAP23O00161 211 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 TAF5LO75529 589 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 IRX6P78412 446 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 DOK7Q18PE1 504 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 LEMD3Q9Y2U8 911 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 RIPOR2Q9Y4F9 1068 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 MED23Q9ULK4 1368 aa16.99■□□□□ 0.31
SOX2-OT-225ENST00000596250 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 ZBTB7BO15156 539 aaPredicted RBP16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 ECE2O60344 883 aa16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 KLRK1P26718 216 aa16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 CXCL9Q07325 125 aa16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 GPC2Q8N158 579 aa16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
SOX2-OT-225ENST00000596250 RAD17O75943 681 aa16.97■□□□□ 0.31
SOX2-OT-225ENST00000596250 MTX1Q13505 466 aa16.97■□□□□ 0.31
SOX2-OT-225ENST00000596250 KCNQ5Q9NR82 932 aa16.97■□□□□ 0.31
SOX2-OT-225ENST00000596250 GJA3Q9Y6H8 435 aa16.97■□□□□ 0.31
SOX2-OT-225ENST00000596250 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
SOX2-OT-225ENST00000596250 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
SOX2-OT-225ENST00000596250 KCNJ4P48050 445 aa16.96■□□□□ 0.31
SOX2-OT-225ENST00000596250 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
SOX2-OT-225ENST00000596250 HMMRO75330 724 aa16.95■□□□□ 0.3
SOX2-OT-225ENST00000596250 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
SOX2-OT-225ENST00000596250 VGLL2Q8N8G2 317 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms