RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 RIC3Q7Z5B4 369 aa20.14■□□□□ 0.81
USHBP1-204ENST00000594190 SP8Q8IXZ3 490 aa20.14■□□□□ 0.81
USHBP1-204ENST00000594190 MAP3K2Q9Y2U5 619 aa20.14■□□□□ 0.81
USHBP1-204ENST00000594190 PCDHB15Q9Y5E8 787 aa20.14■□□□□ 0.81
USHBP1-204ENST00000594190 EPHX2P34913 555 aa20.13■□□□□ 0.81
USHBP1-204ENST00000594190 GRAPQ13588 217 aa20.13■□□□□ 0.81
USHBP1-204ENST00000594190 SF3B3Q15393 1217 aaKnown RBP20.13■□□□□ 0.81
USHBP1-204ENST00000594190 RPAP2Q8IXW5 612 aaPredicted RBP20.13■□□□□ 0.81
USHBP1-204ENST00000594190 LINS1Q8NG48 757 aa20.13■□□□□ 0.81
USHBP1-204ENST00000594190 GRAPLQ8TC17 118 aaPredicted RBP20.13■□□□□ 0.81
USHBP1-204ENST00000594190 JDP2Q8WYK2 163 aa20.13■□□□□ 0.81
USHBP1-204ENST00000594190 CNTNAP1P78357 1384 aa20.12■□□□□ 0.81
USHBP1-204ENST00000594190 FOXN1O15353 648 aa20.12■□□□□ 0.81
USHBP1-204ENST00000594190 AIDAQ96BJ3 306 aa20.12■□□□□ 0.81
USHBP1-204ENST00000594190 FAM89AQ96GI7 184 aa20.12■□□□□ 0.81
USHBP1-204ENST00000594190 METTL22Q9BUU2 404 aaPredicted RBP20.12■□□□□ 0.81
USHBP1-204ENST00000594190 TRPM7Q96QT4 1865 aa20.11■□□□□ 0.81
USHBP1-204ENST00000594190 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
USHBP1-204ENST00000594190 GNAI2P04899 355 aa20.11■□□□□ 0.81
USHBP1-204ENST00000594190 AOC3Q16853 763 aa20.11■□□□□ 0.81
USHBP1-204ENST00000594190 LARGE2Q8N3Y3 721 aa20.11■□□□□ 0.81
USHBP1-204ENST00000594190 PRDM10Q9NQV6 1147 aa20.11■□□□□ 0.81
USHBP1-204ENST00000594190 MYH3P11055 1940 aa20.11■□□□□ 0.81
USHBP1-204ENST00000594190 PPIP5K2O43314 1243 aa20.09■□□□□ 0.81
USHBP1-204ENST00000594190 EIF6P56537 245 aaKnown RBP20.09■□□□□ 0.81
USHBP1-204ENST00000594190 KIAA2012Q0VF49 1180 aa20.09■□□□□ 0.81
USHBP1-204ENST00000594190 DDX46Q7L014 1031 aaKnown RBP20.09■□□□□ 0.81
USHBP1-204ENST00000594190 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
USHBP1-204ENST00000594190 MEIS3Q99687 375 aa20.09■□□□□ 0.81
USHBP1-204ENST00000594190 TMEM88BA6NKF7 163 aa20.08■□□□□ 0.81
USHBP1-204ENST00000594190 HMMRO75330 724 aa20.08■□□□□ 0.81
USHBP1-204ENST00000594190 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-204ENST00000594190 EPS15P42566 896 aa20.08■□□□□ 0.81
USHBP1-204ENST00000594190 CTCFP49711 727 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-204ENST00000594190 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-204ENST00000594190 CELF1Q92879 486 aaKnown RBP20.08■□□□□ 0.81
USHBP1-204ENST00000594190 CLEC11AQ9Y240 323 aa20.08■□□□□ 0.81
USHBP1-204ENST00000594190 SCN9AQ15858 1988 aa20.08■□□□□ 0.8
USHBP1-204ENST00000594190 PSME4Q14997 1843 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 CXCL9Q07325 125 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 TMC4Q7Z404 712 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 NIM1KQ8IY84 436 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 MPNDQ8N594 471 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 ANKRD44Q8N8A2 993 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 SUPT20HQ8NEM7 779 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 USP44Q9H0E7 712 aa20.07■□□□□ 0.8
USHBP1-204ENST00000594190 VEGFBP49765 207 aa20.06■□□□□ 0.8
USHBP1-204ENST00000594190 DPP8Q6V1X1 898 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-204ENST00000594190 ZBTB38Q8NAP3 1195 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-204ENST00000594190 GCC1Q96CN9 775 aa20.06■□□□□ 0.8
USHBP1-204ENST00000594190 C9orf78Q9NZ63 289 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-204ENST00000594190 ZNRF3Q9ULT6 936 aa20.06■□□□□ 0.8
USHBP1-204ENST00000594190 GJA3Q9Y6H8 435 aa20.06■□□□□ 0.8
USHBP1-204ENST00000594190 UTYO14607 1347 aa20.05■□□□□ 0.8
USHBP1-204ENST00000594190 YDJCA8MPS7 323 aa20.05■□□□□ 0.8
USHBP1-204ENST00000594190 IRS4O14654 1257 aaPredicted RBP20.05■□□□□ 0.8
USHBP1-204ENST00000594190 IGHDP01880 384 aa20.05■□□□□ 0.8
USHBP1-204ENST00000594190 MAP1SQ66K74 1059 aaPredicted RBP20.05■□□□□ 0.8
USHBP1-204ENST00000594190 CNTROBQ8N137 903 aa20.05■□□□□ 0.8
USHBP1-204ENST00000594190 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
USHBP1-204ENST00000594190 NEURL1BA8MQ27 555 aa20.04■□□□□ 0.8
USHBP1-204ENST00000594190 CEP85Q6P2H3 762 aa20.04■□□□□ 0.8
USHBP1-204ENST00000594190 SMC5Q8IY18 1101 aa20.04■□□□□ 0.8
USHBP1-204ENST00000594190 CCDC191Q8NCU4 936 aa20.04■□□□□ 0.8
USHBP1-204ENST00000594190 GPRC5DQ9NZD1 345 aa20.04■□□□□ 0.8
USHBP1-204ENST00000594190 ZNF646O15015 1829 aaPredicted RBP20.04■□□□□ 0.8
USHBP1-204ENST00000594190 GRM8O00222 908 aa20.03■□□□□ 0.8
USHBP1-204ENST00000594190 PCCAP05165 728 aaPredicted RBP20.03■□□□□ 0.8
USHBP1-204ENST00000594190 USP50Q70EL3 339 aaPredicted RBP20.03■□□□□ 0.8
USHBP1-204ENST00000594190 MYD88Q99836 296 aa20.03■□□□□ 0.8
USHBP1-204ENST00000594190 SPEF2Q9C093 1822 aa20.03■□□□□ 0.8
USHBP1-204ENST00000594190 IGKV5-2P06315 115 aa20.02■□□□□ 0.8
USHBP1-204ENST00000594190 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
USHBP1-204ENST00000594190 TMX4Q9H1E5 349 aaPredicted RBP20.02■□□□□ 0.8
USHBP1-204ENST00000594190 C1orf115Q9H7X2 142 aa20.02■□□□□ 0.8
USHBP1-204ENST00000594190 WBP1LQ9NX94 342 aa20.02■□□□□ 0.8
USHBP1-204ENST00000594190 POLLQ9UGP5 575 aa20.02■□□□□ 0.8
USHBP1-204ENST00000594190 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
USHBP1-204ENST00000594190 POLR2AP24928 1970 aaKnown RBP20.01■□□□□ 0.79
USHBP1-204ENST00000594190 LBX1P52954 281 aa20.01■□□□□ 0.79
USHBP1-204ENST00000594190 GCKRQ14397 625 aa20.01■□□□□ 0.79
USHBP1-204ENST00000594190 DEFB115Q30KQ5 88 aa20.01■□□□□ 0.79
USHBP1-204ENST00000594190 PGAP2Q9UHJ9 254 aa20.01■□□□□ 0.79
USHBP1-204ENST00000594190 LMOD1P29536 600 aaPredicted RBP20■□□□□ 0.79
USHBP1-204ENST00000594190 GPSM2P81274 684 aa20■□□□□ 0.79
USHBP1-204ENST00000594190 CWF19L2Q2TBE0 894 aaKnown RBP20■□□□□ 0.79
USHBP1-204ENST00000594190 SEC31BQ9NQW1 1179 aa20■□□□□ 0.79
USHBP1-204ENST00000594190 CWC25Q9NXE8 425 aaPredicted RBP20■□□□□ 0.79
USHBP1-204ENST00000594190 PODXL2Q9NZ53 605 aa20■□□□□ 0.79
USHBP1-204ENST00000594190 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
USHBP1-204ENST00000594190 RASSF10A6NK89 507 aa19.99■□□□□ 0.79
USHBP1-204ENST00000594190 GMPSP49915 693 aaPredicted RBP19.99■□□□□ 0.79
USHBP1-204ENST00000594190 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
USHBP1-204ENST00000594190 ATP8B2P98198 1209 aa19.99■□□□□ 0.79
USHBP1-204ENST00000594190 FMR1Q06787 632 aaKnown RBP eCLIP19.99■□□□□ 0.79
USHBP1-204ENST00000594190 CIAPIN1Q6FI81 312 aa19.99■□□□□ 0.79
USHBP1-204ENST00000594190 ADARB2Q9NS39 739 aaKnown RBP19.99■□□□□ 0.79
USHBP1-204ENST00000594190 PDE8AO60658 829 aa19.98■□□□□ 0.79
USHBP1-204ENST00000594190 NBPF7P0C2Y1 421 aaPredicted RBP19.98■□□□□ 0.79
USHBP1-204ENST00000594190 HIRAP54198 1017 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms