RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
VPS25-206ENST00000591584 TAF5LO75529 589 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 PTH1RQ03431 593 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 TTF1Q15361 905 aaPredicted RBP12.45□□□□□ -0.42
VPS25-206ENST00000591584 CCDC152Q4G0S7 254 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 CREB3L3Q68CJ9 461 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 ZSCAN25Q6NSZ9 544 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 PRPF40BQ6NWY9 871 aaKnown RBP12.45□□□□□ -0.42
VPS25-206ENST00000591584 CHMP4CQ96CF2 233 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 XAGE2Q96GT9 111 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 FAM227BQ96M60 508 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 TTC14Q96N46 770 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 PUS3Q9BZE2 481 aaKnown RBP12.45□□□□□ -0.42
VPS25-206ENST00000591584 CNNM1Q9NRU3 951 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 RREB1Q92766 1687 aa12.45□□□□□ -0.42
VPS25-206ENST00000591584 A0A0D9SFI3 127 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 RNF113AO15541 343 aaKnown RBP12.44□□□□□ -0.42
VPS25-206ENST00000591584 PDE8BO95263 885 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
VPS25-206ENST00000591584 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
VPS25-206ENST00000591584 UQCRFS1P1P0C7P4 283 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 ATP2B3Q16720 1220 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 ZMYM1Q5SVZ6 1142 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
VPS25-206ENST00000591584 SUSD4Q5VX71 490 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 RUFY3Q7L099 469 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 GJD4Q96KN9 370 aaPredicted RBP12.44□□□□□ -0.42
VPS25-206ENST00000591584 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 GREM2Q9H772 168 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 PDRG1Q9NUG6 133 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
VPS25-206ENST00000591584 UBN2Q6ZU65 1347 aa12.43□□□□□ -0.42
VPS25-206ENST00000591584 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.43□□□□□ -0.42
VPS25-206ENST00000591584 SLC27A2O14975 620 aa12.43□□□□□ -0.42
VPS25-206ENST00000591584 RPS6KA4O75676 772 aa12.43□□□□□ -0.42
VPS25-206ENST00000591584 LPIN2Q92539 896 aa12.43□□□□□ -0.42
VPS25-206ENST00000591584 JAKMIP1Q96N16 626 aaKnown RBP12.43□□□□□ -0.42
VPS25-206ENST00000591584 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS25-206ENST00000591584 TRPC5Q9UL62 973 aaPredicted RBP12.43□□□□□ -0.42
VPS25-206ENST00000591584 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS25-206ENST00000591584 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
VPS25-206ENST00000591584 GOLIM4O00461 696 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 KCNQ2O43526 872 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 TRAK2O60296 914 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 CASTP20810 708 aaKnown RBP12.42□□□□□ -0.42
VPS25-206ENST00000591584 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
VPS25-206ENST00000591584 PUM3Q15397 648 aaKnown RBP12.42□□□□□ -0.42
VPS25-206ENST00000591584 SLC10A5Q5PT55 438 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 BLOC1S2Q6QNY1 142 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
VPS25-206ENST00000591584 MPHOSPH8Q99549 860 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 UPF3BQ9BZI7 483 aaKnown RBP12.42□□□□□ -0.42
VPS25-206ENST00000591584 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
VPS25-206ENST00000591584 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
VPS25-206ENST00000591584 NTSR2O95665 410 aa12.41□□□□□ -0.42
VPS25-206ENST00000591584 SLC5A1P13866 664 aa12.41□□□□□ -0.42
VPS25-206ENST00000591584 AK2P54819 239 aa12.41□□□□□ -0.42
VPS25-206ENST00000591584 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
VPS25-206ENST00000591584 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
VPS25-206ENST00000591584 VGLL2Q8N8G2 317 aa12.41□□□□□ -0.42
VPS25-206ENST00000591584 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
VPS25-206ENST00000591584 RPAP1Q9BWH6 1393 aaPredicted RBP12.41□□□□□ -0.42
VPS25-206ENST00000591584 NUP98P52948 1817 aa12.4□□□□□ -0.42
VPS25-206ENST00000591584 BAG4O95429 457 aaKnown RBP12.4□□□□□ -0.42
VPS25-206ENST00000591584 BRD1O95696 1058 aa12.4□□□□□ -0.42
VPS25-206ENST00000591584 LINC00116Q8NCU8 138 aa12.4□□□□□ -0.42
VPS25-206ENST00000591584 KAT6BQ8WYB5 2073 aa12.4□□□□□ -0.42
VPS25-206ENST00000591584 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
VPS25-206ENST00000591584 FGFR2P21802 821 aa12.39□□□□□ -0.43
VPS25-206ENST00000591584 RPS6KB1P23443 525 aa12.39□□□□□ -0.43
VPS25-206ENST00000591584 ARID4AP29374 1257 aaPredicted RBP12.39□□□□□ -0.43
VPS25-206ENST00000591584 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
VPS25-206ENST00000591584 ZNF589Q86UQ0 364 aaPredicted RBP12.39□□□□□ -0.43
VPS25-206ENST00000591584 SYNE4Q8N205 404 aa12.39□□□□□ -0.43
VPS25-206ENST00000591584 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
VPS25-206ENST00000591584 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
VPS25-206ENST00000591584 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
VPS25-206ENST00000591584 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
VPS25-206ENST00000591584 ATP6V1DQ9Y5K8 247 aa12.39□□□□□ -0.43
VPS25-206ENST00000591584 IGSF3O75054 1194 aa12.38□□□□□ -0.43
VPS25-206ENST00000591584 ZPR1O75312 459 aa12.38□□□□□ -0.43
VPS25-206ENST00000591584 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
VPS25-206ENST00000591584 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
VPS25-206ENST00000591584 APPBP2Q92624 585 aa12.38□□□□□ -0.43
VPS25-206ENST00000591584 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
VPS25-206ENST00000591584 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
VPS25-206ENST00000591584 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
VPS25-206ENST00000591584 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
VPS25-206ENST00000591584 ATRNO75882 1429 aa12.37□□□□□ -0.43
VPS25-206ENST00000591584 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
VPS25-206ENST00000591584 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
VPS25-206ENST00000591584 ADORA1P30542 326 aa12.37□□□□□ -0.43
VPS25-206ENST00000591584 ADCK5Q3MIX3 580 aa12.37□□□□□ -0.43
VPS25-206ENST00000591584 TPTE2Q6XPS3 522 aa12.37□□□□□ -0.43
VPS25-206ENST00000591584 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms