RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 TMC4Q7Z404 712 aa22.79■■□□□ 1.24
CROCCP3-205ENST00000591316 EYA2O00167 538 aa22.78■■□□□ 1.24
CROCCP3-205ENST00000591316 G3BP1Q13283 466 aaKnown RBP eCLIP22.78■■□□□ 1.24
CROCCP3-205ENST00000591316 ANKIB1Q9P2G1 1089 aa22.78■■□□□ 1.24
CROCCP3-205ENST00000591316 RIPOR2Q9Y4F9 1068 aa22.78■■□□□ 1.24
CROCCP3-205ENST00000591316 TAF5LO75529 589 aa22.77■■□□□ 1.24
CROCCP3-205ENST00000591316 CHRNDQ07001 517 aa22.77■■□□□ 1.24
CROCCP3-205ENST00000591316 OS9Q13438 667 aaPredicted RBP22.77■■□□□ 1.24
CROCCP3-205ENST00000591316 GPSM2P81274 684 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 ARHGAP27Q6ZUM4 889 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 EXOC6BQ9Y2D4 811 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 CACNA1SQ13698 1873 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 CCDC93Q567U6 631 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 METTL24Q5JXM2 366 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 MPNDQ8N594 471 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 BCL11AQ9H165 835 aa22.76■■□□□ 1.23
CROCCP3-205ENST00000591316 DLEC1Q9Y238 1755 aa22.75■■□□□ 1.23
CROCCP3-205ENST00000591316 APBB1O00213 710 aa22.75■■□□□ 1.23
CROCCP3-205ENST00000591316 ATG9AQ7Z3C6 839 aa22.75■■□□□ 1.23
CROCCP3-205ENST00000591316 WTIPA6NIX2 430 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-205ENST00000591316 SOGA3Q5TF21 947 aa22.74■■□□□ 1.23
CROCCP3-205ENST00000591316 CC2D2BQ6DHV5 1058 aa22.74■■□□□ 1.23
CROCCP3-205ENST00000591316 DPP8Q6V1X1 898 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-205ENST00000591316 SNAP23O00161 211 aa22.73■■□□□ 1.23
CROCCP3-205ENST00000591316 CIAO1O76071 339 aa22.73■■□□□ 1.23
CROCCP3-205ENST00000591316 IL15P40933 162 aaPredicted RBP22.73■■□□□ 1.23
CROCCP3-205ENST00000591316 RTKN2Q8IZC4 609 aa22.73■■□□□ 1.23
CROCCP3-205ENST00000591316 C6orf229H3BNL8 230 aa22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 IGHDP01880 384 aa22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 ANKRD2Q9GZV1 360 aa22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 RWDD1Q9H446 243 aaPredicted RBP22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 CEP126Q9P2H0 1117 aa22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 FBXO3Q9UK99 471 aa22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 NOP58Q9Y2X3 529 aaKnown RBP22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 MROH5Q6ZUA9 1318 aa22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 BRCA1P38398 1863 aaKnown RBP22.72■■□□□ 1.23
CROCCP3-205ENST00000591316 UTRNP46939 3433 aa22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 DCAF8L1A6NGE4 600 aa22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 XDHP47989 1333 aa22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 KCNJ4P48050 445 aa22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 TFCP2Q12800 502 aa22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 GPR101Q96P66 508 aaPredicted RBP22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 POLLQ9UGP5 575 aa22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 GGA1Q9UJY5 639 aa22.71■■□□□ 1.23
CROCCP3-205ENST00000591316 SPEF2Q9C093 1822 aa22.7■■□□□ 1.22
CROCCP3-205ENST00000591316 UFL1O94874 794 aa22.7■■□□□ 1.22
CROCCP3-205ENST00000591316 SASH1O94885 1247 aa22.7■■□□□ 1.22
CROCCP3-205ENST00000591316 HDAC1Q13547 482 aaPredicted RBP22.7■■□□□ 1.22
CROCCP3-205ENST00000591316 DCTPP1Q9H773 170 aa22.7■■□□□ 1.22
CROCCP3-205ENST00000591316 GRIN3BO60391 1043 aa22.69■■□□□ 1.22
CROCCP3-205ENST00000591316 PDE8BO95263 885 aa22.69■■□□□ 1.22
CROCCP3-205ENST00000591316 HSP90AB4PQ58FF6 505 aa22.69■■□□□ 1.22
CROCCP3-205ENST00000591316 TBC1D16Q8TBP0 767 aa22.69■■□□□ 1.22
CROCCP3-205ENST00000591316 PODXL2Q9NZ53 605 aa22.69■■□□□ 1.22
CROCCP3-205ENST00000591316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.69■■□□□ 1.22
CROCCP3-205ENST00000591316 RIMBP2O15034 1052 aa22.68■■□□□ 1.22
CROCCP3-205ENST00000591316 ATP2B4P23634 1241 aa22.68■■□□□ 1.22
CROCCP3-205ENST00000591316 RASSF7Q02833 373 aa22.68■■□□□ 1.22
CROCCP3-205ENST00000591316 GRIPAP1Q4V328 841 aa22.68■■□□□ 1.22
CROCCP3-205ENST00000591316 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
CROCCP3-205ENST00000591316 NFKBIEO00221 500 aa22.67■■□□□ 1.22
CROCCP3-205ENST00000591316 FKBP4Q02790 459 aaKnown RBP eCLIP22.67■■□□□ 1.22
CROCCP3-205ENST00000591316 TAOK3Q9H2K8 898 aa22.67■■□□□ 1.22
CROCCP3-205ENST00000591316 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
CROCCP3-205ENST00000591316 LEMD3Q9Y2U8 911 aa22.67■■□□□ 1.22
CROCCP3-205ENST00000591316 VGLL2Q8N8G2 317 aa22.67■■□□□ 1.22
CROCCP3-205ENST00000591316 RAB11FIP3O75154 756 aa22.66■■□□□ 1.22
CROCCP3-205ENST00000591316 TIMM10P62072 90 aa22.66■■□□□ 1.22
CROCCP3-205ENST00000591316 RHPN1Q8TCX5 695 aa22.66■■□□□ 1.22
CROCCP3-205ENST00000591316 IL1RAPL2Q9NP60 686 aa22.66■■□□□ 1.22
CROCCP3-205ENST00000591316 WASHC4Q2M389 1173 aa22.65■■□□□ 1.22
CROCCP3-205ENST00000591316 ERC1Q8IUD2 1116 aa22.65■■□□□ 1.22
CROCCP3-205ENST00000591316 SUPT20HQ8NEM7 779 aa22.65■■□□□ 1.22
CROCCP3-205ENST00000591316 NEUROD6Q96NK8 337 aa22.65■■□□□ 1.22
CROCCP3-205ENST00000591316 PSMD1Q99460 953 aa22.65■■□□□ 1.22
CROCCP3-205ENST00000591316 SMARCA5O60264 1052 aaPredicted RBP22.64■■□□□ 1.22
CROCCP3-205ENST00000591316 B4GALNT3Q6L9W6 998 aa22.64■■□□□ 1.22
CROCCP3-205ENST00000591316 RTFDC1Q9BY42 306 aaPredicted RBP22.64■■□□□ 1.22
CROCCP3-205ENST00000591316 ZC3H12CQ9C0D7 883 aaKnown RBP22.64■■□□□ 1.22
CROCCP3-205ENST00000591316 KLRK1P26718 216 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 UBE4AQ14139 1066 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 PUM3Q15397 648 aaKnown RBP22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 AOC3Q16853 763 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 KIF1BPQ96EK5 621 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 CCDC136Q96JN2 1154 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 AKAP2Q9Y2D5 859 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 ATP2B3Q16720 1220 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 ANKRD45Q5TZF3 282 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 TXNRD3Q86VQ6 643 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 GCC1Q96CN9 775 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 EYA3Q99504 573 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 LRRCC1Q9C099 1032 aa22.63■■□□□ 1.21
CROCCP3-205ENST00000591316 SNED1Q8TER0 1413 aa22.62■■□□□ 1.21
CROCCP3-205ENST00000591316 G3V3G9 751 aa22.62■■□□□ 1.21
CROCCP3-205ENST00000591316 PPIP5K2O43314 1243 aa22.62■■□□□ 1.21
CROCCP3-205ENST00000591316 PRELPP51888 382 aa22.62■■□□□ 1.21
CROCCP3-205ENST00000591316 DCAF8Q5TAQ9 597 aa22.62■■□□□ 1.21
CROCCP3-205ENST00000591316 ERICH6BQ5W0A0 696 aa22.62■■□□□ 1.21
CROCCP3-205ENST00000591316 LPIN2Q92539 896 aa22.62■■□□□ 1.21
CROCCP3-205ENST00000591316 ARFGEF1Q9Y6D6 1849 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms