RNA–Protein interactions for RNA: ENST00000590097.5

PKN1-212, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-212ENST00000590097 R3HDMLQ9H3Y0 253 aa23.27■■□□□ 1.32
PKN1-212ENST00000590097 SH3TC1Q8TE82 1336 aa23.27■■□□□ 1.32
PKN1-212ENST00000590097 C6orf229H3BNL8 230 aa23.26■■□□□ 1.31
PKN1-212ENST00000590097 NFE2L2Q16236 605 aa23.26■■□□□ 1.31
PKN1-212ENST00000590097 ANGEL2Q5VTE6 544 aaKnown RBP23.26■■□□□ 1.31
PKN1-212ENST00000590097 TBC1D16Q8TBP0 767 aa23.25■■□□□ 1.31
PKN1-212ENST00000590097 HTTP42858 3142 aa23.24■■□□□ 1.31
PKN1-212ENST00000590097 SCARF1Q14162 830 aa23.24■■□□□ 1.31
PKN1-212ENST00000590097 PRAMEF18Q5VWM3 479 aa23.24■■□□□ 1.31
PKN1-212ENST00000590097 TMC4Q7Z404 712 aa23.24■■□□□ 1.31
PKN1-212ENST00000590097 PAPPA2Q9BXP8 1791 aa23.24■■□□□ 1.31
PKN1-212ENST00000590097 UBE2Q2LH0YL09 131 aa23.23■■□□□ 1.31
PKN1-212ENST00000590097 ZNF280AP59817 542 aaPredicted RBP23.23■■□□□ 1.31
PKN1-212ENST00000590097 PKN2Q16513 984 aaKnown RBP23.23■■□□□ 1.31
PKN1-212ENST00000590097 HABP4Q5JVS0 413 aaKnown RBP23.23■■□□□ 1.31
PKN1-212ENST00000590097 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
PKN1-212ENST00000590097 HDAC9Q9UKV0 1011 aa23.23■■□□□ 1.31
PKN1-212ENST00000590097 SF3B3Q15393 1217 aaKnown RBP23.22■■□□□ 1.31
PKN1-212ENST00000590097 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
PKN1-212ENST00000590097 FAM89AQ96GI7 184 aa23.22■■□□□ 1.31
PKN1-212ENST00000590097 GPR25O00155 361 aa23.21■■□□□ 1.31
PKN1-212ENST00000590097 HSP90AB3PQ58FF7 597 aa23.21■■□□□ 1.31
PKN1-212ENST00000590097 REM2Q8IYK8 340 aaPredicted RBP23.2■■□□□ 1.3
PKN1-212ENST00000590097 GMLQ99445 158 aa23.2■■□□□ 1.3
PKN1-212ENST00000590097 MKRN3Q13064 507 aaKnown RBP23.19■■□□□ 1.3
PKN1-212ENST00000590097 RTL5Q5HYW3 569 aaPredicted RBP23.19■■□□□ 1.3
PKN1-212ENST00000590097 FBXO46Q6PJ61 603 aaPredicted RBP23.19■■□□□ 1.3
PKN1-212ENST00000590097 POTEFA5A3E0 1075 aa23.18■■□□□ 1.3
PKN1-212ENST00000590097 TM4SF4P48230 202 aa23.18■■□□□ 1.3
PKN1-212ENST00000590097 ISCA1Q9BUE6 129 aa23.18■■□□□ 1.3
PKN1-212ENST00000590097 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
PKN1-212ENST00000590097 FKBP1BP68106 108 aa23.17■■□□□ 1.3
PKN1-212ENST00000590097 RSBN1LQ6PCB5 846 aaPredicted RBP23.17■■□□□ 1.3
PKN1-212ENST00000590097 SEC31BQ9NQW1 1179 aa23.17■■□□□ 1.3
PKN1-212ENST00000590097 ZNF609O15014 1411 aa23.16■■□□□ 1.3
PKN1-212ENST00000590097 EYA3Q99504 573 aa23.16■■□□□ 1.3
PKN1-212ENST00000590097 BRCA2P51587 3418 aa23.15■■□□□ 1.3
PKN1-212ENST00000590097 CENPFP49454 3210 aa23.15■■□□□ 1.3
PKN1-212ENST00000590097 WTIPA6NIX2 430 aaPredicted RBP23.15■■□□□ 1.3
PKN1-212ENST00000590097 RPS8P62241 208 aaKnown RBP23.15■■□□□ 1.3
PKN1-212ENST00000590097 MYOZ2Q9NPC6 264 aa23.15■■□□□ 1.3
PKN1-212ENST00000590097 PODXL2Q9NZ53 605 aa23.15■■□□□ 1.3
PKN1-212ENST00000590097 PSME4Q14997 1843 aa23.15■■□□□ 1.3
PKN1-212ENST00000590097 NBPF9Q3BBW0 867 aa23.14■■□□□ 1.29
PKN1-212ENST00000590097 NOM1Q5C9Z4 860 aaKnown RBP23.14■■□□□ 1.29
PKN1-212ENST00000590097 GCC1Q96CN9 775 aa23.14■■□□□ 1.29
PKN1-212ENST00000590097 ZC3H12CQ9C0D7 883 aaKnown RBP23.14■■□□□ 1.29
PKN1-212ENST00000590097 UFL1O94874 794 aa23.13■■□□□ 1.29
PKN1-212ENST00000590097 AGBL3Q8NEM8 1001 aa23.13■■□□□ 1.29
PKN1-212ENST00000590097 MXD3Q9BW11 206 aa23.13■■□□□ 1.29
PKN1-212ENST00000590097 CHPF2Q9P2E5 772 aa23.13■■□□□ 1.29
PKN1-212ENST00000590097 PITPNM2Q9BZ72 1349 aa23.12■■□□□ 1.29
PKN1-212ENST00000590097 IRS4O14654 1257 aaPredicted RBP23.11■■□□□ 1.29
PKN1-212ENST00000590097 FKTNO75072 461 aa23.11■■□□□ 1.29
PKN1-212ENST00000590097 FXR1P51114 621 aaKnown RBP eCLIP23.11■■□□□ 1.29
PKN1-212ENST00000590097 PTPN12Q05209 780 aaKnown RBP23.11■■□□□ 1.29
PKN1-212ENST00000590097 PLBD2Q8NHP8 589 aa23.11■■□□□ 1.29
PKN1-212ENST00000590097 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
PKN1-212ENST00000590097 NEFMP07197 916 aa23.1■■□□□ 1.29
PKN1-212ENST00000590097 USP17L8P0C7I0 530 aa23.1■■□□□ 1.29
PKN1-212ENST00000590097 CFHR5Q9BXR6 569 aa23.1■■□□□ 1.29
PKN1-212ENST00000590097 FZD1Q9UP38 647 aa23.1■■□□□ 1.29
PKN1-212ENST00000590097 RIPK4P57078 832 aa23.08■■□□□ 1.29
PKN1-212ENST00000590097 CAP1Q01518 475 aa23.08■■□□□ 1.29
PKN1-212ENST00000590097 ANKRD13DQ6ZTN6 518 aa23.08■■□□□ 1.29
PKN1-212ENST00000590097 GGA1Q9UJY5 639 aa23.08■■□□□ 1.29
PKN1-212ENST00000590097 PRKG1Q13976 671 aa23.07■■□□□ 1.28
PKN1-212ENST00000590097 TTLL12Q14166 644 aaPredicted RBP23.07■■□□□ 1.28
PKN1-212ENST00000590097 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
PKN1-212ENST00000590097 G3V3G9 751 aa23.06■■□□□ 1.28
PKN1-212ENST00000590097 DCAF8Q5TAQ9 597 aa23.06■■□□□ 1.28
PKN1-212ENST00000590097 OTOP1Q7RTM1 612 aa23.06■■□□□ 1.28
PKN1-212ENST00000590097 JARID2Q92833 1246 aaPredicted RBP23.06■■□□□ 1.28
PKN1-212ENST00000590097 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
PKN1-212ENST00000590097 WNT10BO00744 389 aa23.05■■□□□ 1.28
PKN1-212ENST00000590097 CCDC85AQ96PX6 553 aaPredicted RBP23.05■■□□□ 1.28
PKN1-212ENST00000590097 BABAM1Q9NWV8 329 aa23.05■■□□□ 1.28
PKN1-212ENST00000590097 TRIM17Q9Y577 477 aa23.05■■□□□ 1.28
PKN1-212ENST00000590097 USP17L3A6NCW0 530 aa23.04■■□□□ 1.28
PKN1-212ENST00000590097 USP17L4A6NCW7 530 aa23.04■■□□□ 1.28
PKN1-212ENST00000590097 SPRYD7Q5W111 196 aa23.04■■□□□ 1.28
PKN1-212ENST00000590097 USP17L1Q7RTZ2 530 aa23.04■■□□□ 1.28
PKN1-212ENST00000590097 EN2P19622 333 aaPredicted RBP23.03■■□□□ 1.28
PKN1-212ENST00000590097 TRIM28Q13263 835 aaKnown RBP23.03■■□□□ 1.28
PKN1-212ENST00000590097 LDLRAD1Q5T700 205 aa23.03■■□□□ 1.28
PKN1-212ENST00000590097 CHL1O00533 1208 aa23.02■■□□□ 1.28
PKN1-212ENST00000590097 SASH1O94885 1247 aa23.02■■□□□ 1.28
PKN1-212ENST00000590097 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
PKN1-212ENST00000590097 SREBF2Q12772 1141 aa23.02■■□□□ 1.28
PKN1-212ENST00000590097 DACT2Q5SW24 774 aa23.02■■□□□ 1.28
PKN1-212ENST00000590097 KIAA0100Q14667 2235 aaKnown RBP23.01■■□□□ 1.27
PKN1-212ENST00000590097 IGF2BP3O00425 579 aaKnown RBP eCLIP23.01■■□□□ 1.27
PKN1-212ENST00000590097 HDGFL1Q5TGJ6 251 aa23.01■■□□□ 1.27
PKN1-212ENST00000590097 RBBP6Q7Z6E9 1792 aaKnown RBP23.01■■□□□ 1.27
PKN1-212ENST00000590097 PODNQ7Z5L7 613 aa23■■□□□ 1.27
PKN1-212ENST00000590097 ZBTB38Q8NAP3 1195 aaPredicted RBP23■■□□□ 1.27
PKN1-212ENST00000590097 SZT2Q5T011 3432 aa23■■□□□ 1.27
PKN1-212ENST00000590097 IFNL1Q8IU54 200 aa22.99■■□□□ 1.27
PKN1-212ENST00000590097 COLQQ9Y215 455 aaPredicted RBP22.99■■□□□ 1.27
PKN1-212ENST00000590097 XDHP47989 1333 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms