RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SULF1Q8IWU6 871 aa16.83■□□□□ 0.28
PRKCSH-210ENST00000589990 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
PRKCSH-210ENST00000589990 TBC1D8O95759 1140 aa16.82■□□□□ 0.28
PRKCSH-210ENST00000589990 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
PRKCSH-210ENST00000589990 RTL5Q5HYW3 569 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-210ENST00000589990 ANGEL2Q5VTE6 544 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-210ENST00000589990 TBC1D16Q8TBP0 767 aa16.82■□□□□ 0.28
PRKCSH-210ENST00000589990 ZNF296Q8WUU4 475 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-210ENST00000589990 MKI67P46013 3256 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-210ENST00000589990 HTTP42858 3142 aa16.81■□□□□ 0.28
PRKCSH-210ENST00000589990 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
PRKCSH-210ENST00000589990 SCARF1Q14162 830 aa16.81■□□□□ 0.28
PRKCSH-210ENST00000589990 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
PRKCSH-210ENST00000589990 NEFMP07197 916 aa16.8■□□□□ 0.28
PRKCSH-210ENST00000589990 VIL1P09327 827 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-210ENST00000589990 SF3B3Q15393 1217 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-210ENST00000589990 PRAMEF18Q5VWM3 479 aa16.8■□□□□ 0.28
PRKCSH-210ENST00000589990 PAPPA2Q9BXP8 1791 aa16.79■□□□□ 0.28
PRKCSH-210ENST00000589990 R3HDMLQ9H3Y0 253 aa16.79■□□□□ 0.28
PRKCSH-210ENST00000589990 CHPF2Q9P2E5 772 aa16.79■□□□□ 0.28
PRKCSH-210ENST00000589990 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
PRKCSH-210ENST00000589990 ZNF280AP59817 542 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-210ENST00000589990 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-210ENST00000589990 ISCA1Q9BUE6 129 aa16.78■□□□□ 0.28
PRKCSH-210ENST00000589990 SEC31BQ9NQW1 1179 aa16.78■□□□□ 0.28
PRKCSH-210ENST00000589990 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
PRKCSH-210ENST00000589990 WTIPA6NIX2 430 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-210ENST00000589990 RIPK4P57078 832 aa16.77■□□□□ 0.28
PRKCSH-210ENST00000589990 EYA3Q99504 573 aa16.77■□□□□ 0.28
PRKCSH-210ENST00000589990 HDAC9Q9UKV0 1011 aa16.77■□□□□ 0.28
PRKCSH-210ENST00000589990 PSME4Q14997 1843 aa16.77■□□□□ 0.27
PRKCSH-210ENST00000589990 CENPFP49454 3210 aa16.76■□□□□ 0.27
PRKCSH-210ENST00000589990 UFL1O94874 794 aa16.76■□□□□ 0.27
PRKCSH-210ENST00000589990 RSBN1LQ6PCB5 846 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-210ENST00000589990 GPR25O00155 361 aa16.75■□□□□ 0.27
PRKCSH-210ENST00000589990 RPS8P62241 208 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-210ENST00000589990 GMLQ99445 158 aa16.75■□□□□ 0.27
PRKCSH-210ENST00000589990 ZC3H12CQ9C0D7 883 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-210ENST00000589990 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-210ENST00000589990 PLBD2Q8NHP8 589 aa16.74■□□□□ 0.27
PRKCSH-210ENST00000589990 MXD3Q9BW11 206 aa16.74■□□□□ 0.27
PRKCSH-210ENST00000589990 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
PRKCSH-210ENST00000589990 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
PRKCSH-210ENST00000589990 BRCA2P51587 3418 aa16.74■□□□□ 0.27
PRKCSH-210ENST00000589990 ZNF646O15015 1829 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 ZNF609O15014 1411 aa16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 FKBP1BP68106 108 aa16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 PKN2Q16513 984 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 ANKRD13DQ6ZTN6 518 aa16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 JARID2Q92833 1246 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-210ENST00000589990 USP17L8P0C7I0 530 aa16.72■□□□□ 0.27
PRKCSH-210ENST00000589990 TM4SF4P48230 202 aa16.72■□□□□ 0.27
PRKCSH-210ENST00000589990 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-210ENST00000589990 AGBL3Q8NEM8 1001 aa16.72■□□□□ 0.27
PRKCSH-210ENST00000589990 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
PRKCSH-210ENST00000589990 G3V3G9 751 aa16.71■□□□□ 0.27
PRKCSH-210ENST00000589990 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-210ENST00000589990 DCAF8Q5TAQ9 597 aa16.71■□□□□ 0.27
PRKCSH-210ENST00000589990 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.27
PRKCSH-210ENST00000589990 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
PRKCSH-210ENST00000589990 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
PRKCSH-210ENST00000589990 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
PRKCSH-210ENST00000589990 POTEFA5A3E0 1075 aa16.7■□□□□ 0.26
PRKCSH-210ENST00000589990 CHL1O00533 1208 aa16.7■□□□□ 0.26
PRKCSH-210ENST00000589990 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-210ENST00000589990 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-210ENST00000589990 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
PRKCSH-210ENST00000589990 LAS1LQ9Y4W2 734 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-210ENST00000589990 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-210ENST00000589990 PRKG1Q13976 671 aa16.69■□□□□ 0.26
PRKCSH-210ENST00000589990 NEUROD2Q15784 382 aa16.69■□□□□ 0.26
PRKCSH-210ENST00000589990 CCDC146Q8IYE0 955 aa16.68■□□□□ 0.26
PRKCSH-210ENST00000589990 USP17L3A6NCW0 530 aa16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 USP17L4A6NCW7 530 aa16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 FKTNO75072 461 aa16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 SASH1O94885 1247 aa16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 TRIM28Q13263 835 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 NOM1Q5C9Z4 860 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 USP17L1Q7RTZ2 530 aa16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
PRKCSH-210ENST00000589990 WNT10BO00744 389 aa16.66■□□□□ 0.26
PRKCSH-210ENST00000589990 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-210ENST00000589990 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-210ENST00000589990 PHAXQ9H814 394 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-210ENST00000589990 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-210ENST00000589990 DBF4Q9UBU7 674 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-210ENST00000589990 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
PRKCSH-210ENST00000589990 DACT2Q5SW24 774 aa16.65■□□□□ 0.26
PRKCSH-210ENST00000589990 XDHP47989 1333 aa16.65■□□□□ 0.26
PRKCSH-210ENST00000589990 KIAA0100Q14667 2235 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-210ENST00000589990 CAP1Q01518 475 aa16.64■□□□□ 0.25
PRKCSH-210ENST00000589990 TXNRD3Q86VQ6 643 aa16.64■□□□□ 0.25
PRKCSH-210ENST00000589990 GCC1Q96CN9 775 aa16.64■□□□□ 0.25
PRKCSH-210ENST00000589990 MYD88Q99836 296 aa16.64■□□□□ 0.25
PRKCSH-210ENST00000589990 CFHR5Q9BXR6 569 aa16.64■□□□□ 0.25
PRKCSH-210ENST00000589990 TRIM17Q9Y577 477 aa16.64■□□□□ 0.25
PRKCSH-210ENST00000589990 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms