RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 HMGN5P82970 282 aaKnown RBP11.51□□□□□ -0.57
LINC01539-201ENST00000587904 ZKSCAN5Q9Y2L8 839 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
LINC01539-201ENST00000587904 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
LINC01539-201ENST00000587904 TULP2O00295 520 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 ATP5JP18859 108 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 KCNJ4P48050 445 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 EIF5P55010 431 aaKnown RBP11.5□□□□□ -0.57
LINC01539-201ENST00000587904 TFCP2Q12800 502 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 NLRP10Q86W26 655 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 DZIP3Q86Y13 1208 aaKnown RBP11.5□□□□□ -0.57
LINC01539-201ENST00000587904 CHMP3Q9Y3E7 222 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 MYH3P11055 1940 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 EYA2O00167 538 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 MCM2P49736 904 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 FAM98CQ17RN3 349 aaKnown RBP11.5□□□□□ -0.57
LINC01539-201ENST00000587904 ZNF771Q7L3S4 317 aaPredicted RBP11.5□□□□□ -0.57
LINC01539-201ENST00000587904 AK7Q96M32 723 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 TIGD1Q96MW7 591 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 CCDC8Q9H0W5 538 aaPredicted RBP11.5□□□□□ -0.57
LINC01539-201ENST00000587904 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 KCNG1Q9UIX4 513 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 ZNF609O15014 1411 aa11.5□□□□□ -0.57
LINC01539-201ENST00000587904 NHSQ6T4R5 1651 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 SPEF2Q9C093 1822 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 MAP4K4O95819 1239 aaPredicted RBP11.49□□□□□ -0.57
LINC01539-201ENST00000587904 CSF1RP07333 972 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 DDIT3P35638 169 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 CCDC57Q2TAC2 916 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 ATG9AQ7Z3C6 839 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 ACSBG1Q96GR2 724 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 FEZ1Q99689 392 aa11.49□□□□□ -0.57
LINC01539-201ENST00000587904 TLR7Q9NYK1 1049 aaKnown RBP11.49□□□□□ -0.57
LINC01539-201ENST00000587904 DBNLQ9UJU6 430 aaKnown RBP11.49□□□□□ -0.57
LINC01539-201ENST00000587904 BCORQ6W2J9 1755 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 RGL2O15211 777 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 APPP05067 770 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 HSPA4P34932 840 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 CRKLP46109 303 aaKnown RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 INTS5Q6P9B9 1019 aaKnown RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 PDLIM2Q96JY6 352 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 RGS17Q9UGC6 210 aaPredicted RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 USP21Q9UK80 565 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 NPM3O75607 178 aaKnown RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 HLFQ16534 295 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
LINC01539-201ENST00000587904 LAMB2P55268 1798 aa11.48□□□□□ -0.57
LINC01539-201ENST00000587904 LRP5O75197 1615 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 FAM193AP78312 1265 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 LSG1Q9H089 658 aaKnown RBP11.47□□□□□ -0.57
LINC01539-201ENST00000587904 A0A0G2JS52 829 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 IFIT5Q13325 482 aaKnown RBP11.47□□□□□ -0.57
LINC01539-201ENST00000587904 PARP10Q53GL7 1025 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 CWC27Q6UX04 472 aaKnown RBP11.47□□□□□ -0.57
LINC01539-201ENST00000587904 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 HAUS7Q99871 368 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 FSD1Q9BTV5 496 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 AKAP2Q9Y2D5 859 aa11.47□□□□□ -0.57
LINC01539-201ENST00000587904 GPTP24298 496 aa11.46□□□□□ -0.57
LINC01539-201ENST00000587904 CTSWP56202 376 aa11.46□□□□□ -0.57
LINC01539-201ENST00000587904 ITPK1Q13572 414 aa11.46□□□□□ -0.57
LINC01539-201ENST00000587904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC01539-201ENST00000587904 BOLA2Q9H3K6 86 aa11.46□□□□□ -0.57
LINC01539-201ENST00000587904 CALCOCO1Q9P1Z2 691 aa11.46□□□□□ -0.57
LINC01539-201ENST00000587904 TRMT112Q9UI30 125 aaKnown RBP11.46□□□□□ -0.57
LINC01539-201ENST00000587904 CNTNAP4Q9C0A0 1308 aa11.46□□□□□ -0.58
LINC01539-201ENST00000587904 ABCC12Q96J65 1359 aa11.46□□□□□ -0.58
LINC01539-201ENST00000587904 PDE8AO60658 829 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 GBP4Q96PP9 640 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 DBNDD2Q9BQY9 259 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 IL25Q9H293 177 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 CEP126Q9P2H0 1117 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 ZNF652Q9Y2D9 606 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 MED23Q9ULK4 1368 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 SCN7AQ01118 1682 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 MYH14Q7Z406 1995 aaKnown RBP11.45□□□□□ -0.58
LINC01539-201ENST00000587904 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
LINC01539-201ENST00000587904 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 CCDC39Q9UFE4 941 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 TBC1D2BQ9UPU7 963 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 UBN2Q6ZU65 1347 aa11.45□□□□□ -0.58
LINC01539-201ENST00000587904 BTAF1O14981 1849 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 ANKRD18BA2A2Z9 1011 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 LRRC24Q50LG9 513 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
LINC01539-201ENST00000587904 TTLL11Q8NHH1 800 aa11.44□□□□□ -0.58
LINC01539-201ENST00000587904 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms