RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 MPNDQ8N594 471 aa20.82■□□□□ 0.92
GCDH-203ENST00000585420 DPP8Q6V1X1 898 aaPredicted RBP20.81■□□□□ 0.92
GCDH-203ENST00000585420 ZNF784Q8NCA9 323 aaPredicted RBP20.81■□□□□ 0.92
GCDH-203ENST00000585420 NSFL1CQ9UNZ2 370 aaKnown RBP20.81■□□□□ 0.92
GCDH-203ENST00000585420 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
GCDH-203ENST00000585420 CEP85Q6P2H3 762 aa20.81■□□□□ 0.92
GCDH-203ENST00000585420 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
GCDH-203ENST00000585420 ANKRD18BA2A2Z9 1011 aa20.8■□□□□ 0.92
GCDH-203ENST00000585420 GPSM2P81274 684 aa20.8■□□□□ 0.92
GCDH-203ENST00000585420 IFIT5Q13325 482 aaKnown RBP20.8■□□□□ 0.92
GCDH-203ENST00000585420 ANKRD44Q8N8A2 993 aa20.8■□□□□ 0.92
GCDH-203ENST00000585420 RTFDC1Q9BY42 306 aaPredicted RBP20.8■□□□□ 0.92
GCDH-203ENST00000585420 BSDC1Q9NW68 430 aaPredicted RBP20.8■□□□□ 0.92
GCDH-203ENST00000585420 IARSP41252 1262 aaKnown RBP20.79■□□□□ 0.92
GCDH-203ENST00000585420 RABL6Q3YEC7 729 aaPredicted RBP20.79■□□□□ 0.92
GCDH-203ENST00000585420 RPAP2Q8IXW5 612 aaPredicted RBP20.79■□□□□ 0.92
GCDH-203ENST00000585420 RWDD1Q9H446 243 aaPredicted RBP20.79■□□□□ 0.92
GCDH-203ENST00000585420 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
GCDH-203ENST00000585420 CCDC57Q2TAC2 916 aa20.78■□□□□ 0.92
GCDH-203ENST00000585420 ZNF526Q8TF50 670 aaPredicted RBP20.78■□□□□ 0.92
GCDH-203ENST00000585420 IGHDP01880 384 aa20.78■□□□□ 0.92
GCDH-203ENST00000585420 ZNF594Q96JF6 807 aaPredicted RBP20.78■□□□□ 0.92
GCDH-203ENST00000585420 MPHOSPH8Q99549 860 aa20.78■□□□□ 0.92
GCDH-203ENST00000585420 POLLQ9UGP5 575 aa20.78■□□□□ 0.92
GCDH-203ENST00000585420 MINPP1Q9UNW1 487 aa20.78■□□□□ 0.92
GCDH-203ENST00000585420 HDAC1Q13547 482 aaPredicted RBP20.77■□□□□ 0.92
GCDH-203ENST00000585420 SIRT2Q8IXJ6 389 aa20.77■□□□□ 0.92
GCDH-203ENST00000585420 ANKIB1Q9P2G1 1089 aa20.77■□□□□ 0.92
GCDH-203ENST00000585420 DUOX1Q9NRD9 1551 aa20.77■□□□□ 0.92
GCDH-203ENST00000585420 AOC3Q16853 763 aa20.76■□□□□ 0.91
GCDH-203ENST00000585420 PODXL2Q9NZ53 605 aa20.76■□□□□ 0.91
GCDH-203ENST00000585420 COL4A5P29400 1685 aa20.76■□□□□ 0.91
GCDH-203ENST00000585420 SUPT20HQ8NEM7 779 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 ZC3H4Q9UPT8 1303 aaKnown RBP20.75■□□□□ 0.91
GCDH-203ENST00000585420 SPEF2Q9C093 1822 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 WTIPA6NIX2 430 aaPredicted RBP20.75■□□□□ 0.91
GCDH-203ENST00000585420 C6orf229H3BNL8 230 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 PPIP5K2O43314 1243 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 HMMRO75330 724 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 ATP8B2P98198 1209 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 CENPQQ7L2Z9 268 aaPredicted RBP20.75■□□□□ 0.91
GCDH-203ENST00000585420 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 TBC1D16Q8TBP0 767 aa20.75■□□□□ 0.91
GCDH-203ENST00000585420 GPR101Q96P66 508 aaPredicted RBP20.75■□□□□ 0.91
GCDH-203ENST00000585420 DICER1Q9UPY3 1922 aaKnown RBP20.75■□□□□ 0.91
GCDH-203ENST00000585420 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
GCDH-203ENST00000585420 LTBP1Q14766 1721 aa20.74■□□□□ 0.91
GCDH-203ENST00000585420 PNMA6EA0A0J9YXQ4 647 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 SRGAP3O43295 1099 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 XDHP47989 1333 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 TAF7LQ5H9L4 462 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 KDM2BQ8NHM5 1336 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 JDP2Q8WYK2 163 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 GGA1Q9UJY5 639 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 UFL1O94874 794 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 KIAA2012Q0VF49 1180 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 WASHC4Q2M389 1173 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 LDHAL6AQ6ZMR3 332 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 KLHDC4Q8TBB5 520 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 VPS33BQ9H267 617 aa20.73■□□□□ 0.91
GCDH-203ENST00000585420 RIMBP2O15034 1052 aa20.72■□□□□ 0.91
GCDH-203ENST00000585420 CHRNDQ07001 517 aa20.72■□□□□ 0.91
GCDH-203ENST00000585420 MTX1Q13505 466 aa20.72■□□□□ 0.91
GCDH-203ENST00000585420 GPBP1L1Q9HC44 474 aaPredicted RBP20.72■□□□□ 0.91
GCDH-203ENST00000585420 GLTPD2A6NH11 291 aa20.71■□□□□ 0.91
GCDH-203ENST00000585420 FZD9O00144 591 aa20.71■□□□□ 0.91
GCDH-203ENST00000585420 PUS3Q9BZE2 481 aaKnown RBP20.71■□□□□ 0.91
GCDH-203ENST00000585420 CNNM1Q9NRU3 951 aa20.71■□□□□ 0.91
GCDH-203ENST00000585420 ZNF541Q9H0D2 1346 aa20.7■□□□□ 0.9
GCDH-203ENST00000585420 TAF5LO75529 589 aa20.7■□□□□ 0.9
GCDH-203ENST00000585420 ATP2B4P23634 1241 aa20.7■□□□□ 0.9
GCDH-203ENST00000585420 RFX5P48382 616 aaPredicted RBP20.7■□□□□ 0.9
GCDH-203ENST00000585420 DPY19L2Q6NUT2 758 aa20.7■□□□□ 0.9
GCDH-203ENST00000585420 NIM1KQ8IY84 436 aa20.7■□□□□ 0.9
GCDH-203ENST00000585420 HELBQ8NG08 1087 aaPredicted RBP20.7■□□□□ 0.9
GCDH-203ENST00000585420 SSH3Q8TE77 659 aa20.7■□□□□ 0.9
GCDH-203ENST00000585420 DDNO94850 711 aaPredicted RBP20.69■□□□□ 0.9
GCDH-203ENST00000585420 POLA2Q14181 598 aa20.69■□□□□ 0.9
GCDH-203ENST00000585420 EYA3Q99504 573 aa20.69■□□□□ 0.9
GCDH-203ENST00000585420 ANKRD2Q9GZV1 360 aa20.69■□□□□ 0.9
GCDH-203ENST00000585420 SNAP23O00161 211 aa20.68■□□□□ 0.9
GCDH-203ENST00000585420 LRRC24Q50LG9 513 aa20.68■□□□□ 0.9
GCDH-203ENST00000585420 ZC3H12CQ9C0D7 883 aaKnown RBP20.68■□□□□ 0.9
GCDH-203ENST00000585420 NMRK2Q9NPI5 230 aa20.68■□□□□ 0.9
GCDH-203ENST00000585420 PTPN12Q05209 780 aaKnown RBP20.67■□□□□ 0.9
GCDH-203ENST00000585420 GCC1Q96CN9 775 aa20.67■□□□□ 0.9
GCDH-203ENST00000585420 DBNDD1Q9H9R9 158 aa20.67■□□□□ 0.9
GCDH-203ENST00000585420 RIPOR2Q9Y4F9 1068 aa20.67■□□□□ 0.9
GCDH-203ENST00000585420 DOK7Q18PE1 504 aa20.67■□□□□ 0.9
GCDH-203ENST00000585420 DCTPP1Q9H773 170 aa20.67■□□□□ 0.9
GCDH-203ENST00000585420 ZNRF3Q9ULT6 936 aa20.67■□□□□ 0.9
GCDH-203ENST00000585420 LEMD3Q9Y2U8 911 aa20.67■□□□□ 0.9
GCDH-203ENST00000585420 ZNF804BA4D1E1 1349 aa20.66■□□□□ 0.9
GCDH-203ENST00000585420 YDJCA8MPS7 323 aa20.66■□□□□ 0.9
GCDH-203ENST00000585420 EIF6P56537 245 aaKnown RBP20.66■□□□□ 0.9
GCDH-203ENST00000585420 SMC5Q8IY18 1101 aa20.66■□□□□ 0.9
GCDH-203ENST00000585420 RRAGCQ9HB90 399 aa20.66■□□□□ 0.9
GCDH-203ENST00000585420 TXNRD3Q86VQ6 643 aa20.65■□□□□ 0.9
GCDH-203ENST00000585420 SURF6O75683 361 aaKnown RBP20.64■□□□□ 0.9
GCDH-203ENST00000585420 KLRK1P26718 216 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms