RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 GPR108Q9NPR9 543 aa16.9■□□□□ 0.3
ITGB4-209ENST00000583327 TAF1P21675 1872 aa16.9■□□□□ 0.3
ITGB4-209ENST00000583327 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
ITGB4-209ENST00000583327 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.3
ITGB4-209ENST00000583327 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
ITGB4-209ENST00000583327 SP8Q8IXZ3 490 aa16.89■□□□□ 0.29
ITGB4-209ENST00000583327 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
ITGB4-209ENST00000583327 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
ITGB4-209ENST00000583327 ATP6V0A2Q9Y487 856 aa16.89■□□□□ 0.29
ITGB4-209ENST00000583327 PDE8BO95263 885 aa16.88■□□□□ 0.29
ITGB4-209ENST00000583327 CHRNDQ07001 517 aa16.88■□□□□ 0.29
ITGB4-209ENST00000583327 TFCP2Q12800 502 aa16.88■□□□□ 0.29
ITGB4-209ENST00000583327 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
ITGB4-209ENST00000583327 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
ITGB4-209ENST00000583327 FGFR2P21802 821 aa16.87■□□□□ 0.29
ITGB4-209ENST00000583327 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.29
ITGB4-209ENST00000583327 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
ITGB4-209ENST00000583327 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
ITGB4-209ENST00000583327 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
ITGB4-209ENST00000583327 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
ITGB4-209ENST00000583327 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
ITGB4-209ENST00000583327 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
ITGB4-209ENST00000583327 TTLL6Q8N841 843 aa16.86■□□□□ 0.29
ITGB4-209ENST00000583327 EAF2Q96CJ1 260 aaPredicted RBP16.86■□□□□ 0.29
ITGB4-209ENST00000583327 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
ITGB4-209ENST00000583327 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
ITGB4-209ENST00000583327 LRRC37AA6NMS7 1700 aa16.85■□□□□ 0.29
ITGB4-209ENST00000583327 PDE4AP27815 886 aa16.85■□□□□ 0.29
ITGB4-209ENST00000583327 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-209ENST00000583327 METTL24Q5JXM2 366 aa16.85■□□□□ 0.29
ITGB4-209ENST00000583327 SLC51AQ86UW1 340 aa16.85■□□□□ 0.29
ITGB4-209ENST00000583327 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
ITGB4-209ENST00000583327 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 CC2D2BQ6DHV5 1058 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 C16orf71Q8IYS4 520 aaPredicted RBP16.84■□□□□ 0.29
ITGB4-209ENST00000583327 CLASRPQ8N2M8 674 aaKnown RBP16.84■□□□□ 0.29
ITGB4-209ENST00000583327 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
ITGB4-209ENST00000583327 LNPKQ9C0E8 428 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 IL1RAPL2Q9NP60 686 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 IRS2Q9Y4H2 1338 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
ITGB4-209ENST00000583327 APBB1O00213 710 aa16.83■□□□□ 0.28
ITGB4-209ENST00000583327 TAF5LO75529 589 aa16.83■□□□□ 0.28
ITGB4-209ENST00000583327 TIMM10P62072 90 aa16.83■□□□□ 0.28
ITGB4-209ENST00000583327 HELBQ8NG08 1087 aaPredicted RBP16.83■□□□□ 0.28
ITGB4-209ENST00000583327 SYT17Q9BSW7 474 aa16.83■□□□□ 0.28
ITGB4-209ENST00000583327 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.28
ITGB4-209ENST00000583327 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
ITGB4-209ENST00000583327 A0A1B0GUL6 1792 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 WTIPA6NIX2 430 aaPredicted RBP16.82■□□□□ 0.28
ITGB4-209ENST00000583327 ZBTB22O15209 634 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 GPSM2P81274 684 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
ITGB4-209ENST00000583327 LPIN2Q92539 896 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 STAP2Q9UGK3 403 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
ITGB4-209ENST00000583327 ZNF609O15014 1411 aa16.81■□□□□ 0.28
ITGB4-209ENST00000583327 XDHP47989 1333 aa16.81■□□□□ 0.28
ITGB4-209ENST00000583327 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
ITGB4-209ENST00000583327 SNAP23O00161 211 aa16.81■□□□□ 0.28
ITGB4-209ENST00000583327 PUM3Q15397 648 aaKnown RBP16.81■□□□□ 0.28
ITGB4-209ENST00000583327 RTFDC1Q9BY42 306 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-209ENST00000583327 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
ITGB4-209ENST00000583327 PPP1R1BQ9UD71 204 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-209ENST00000583327 ATP2B4P23634 1241 aa16.8■□□□□ 0.28
ITGB4-209ENST00000583327 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
ITGB4-209ENST00000583327 DALRD3Q5D0E6 543 aaKnown RBP16.8■□□□□ 0.28
ITGB4-209ENST00000583327 OLFM4Q6UX06 510 aa16.8■□□□□ 0.28
ITGB4-209ENST00000583327 PLEKHM2Q8IWE5 1019 aa16.8■□□□□ 0.28
ITGB4-209ENST00000583327 OTUD7AQ8TE49 926 aaPredicted RBP16.8■□□□□ 0.28
ITGB4-209ENST00000583327 POLLQ9UGP5 575 aa16.8■□□□□ 0.28
ITGB4-209ENST00000583327 DBNLQ9UJU6 430 aaKnown RBP16.8■□□□□ 0.28
ITGB4-209ENST00000583327 ZNF804BA4D1E1 1349 aa16.79■□□□□ 0.28
ITGB4-209ENST00000583327 AACSQ86V21 672 aa16.79■□□□□ 0.28
ITGB4-209ENST00000583327 TBC1D16Q8TBP0 767 aa16.79■□□□□ 0.28
ITGB4-209ENST00000583327 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
ITGB4-209ENST00000583327 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
ITGB4-209ENST00000583327 TLR7Q9NYK1 1049 aaKnown RBP16.79■□□□□ 0.28
ITGB4-209ENST00000583327 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
ITGB4-209ENST00000583327 DUOX1Q9NRD9 1551 aa16.78■□□□□ 0.28
ITGB4-209ENST00000583327 C21orf2O43822 256 aa16.78■□□□□ 0.28
ITGB4-209ENST00000583327 SKAP1Q86WV1 359 aa16.78■□□□□ 0.28
ITGB4-209ENST00000583327 MPNDQ8N594 471 aa16.78■□□□□ 0.28
ITGB4-209ENST00000583327 DBNDD2Q9BQY9 259 aa16.78■□□□□ 0.28
ITGB4-209ENST00000583327 ZBTB47Q9UFB7 747 aaPredicted RBP16.78■□□□□ 0.28
ITGB4-209ENST00000583327 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.28
ITGB4-209ENST00000583327 SLC5A1P13866 664 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 ADORA1P30542 326 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 PDE1AP54750 535 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 SOGA3Q5TF21 947 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 FBXO33Q7Z6M2 555 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 ZNF512BQ96KM6 892 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms