RNA–Protein interactions for RNA: ENST00000581104.5

NUP85-216, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 2,233 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-216ENST00000581104 KLHDC4Q8TBB5 520 aa11.71□□□□□ -0.53
NUP85-216ENST00000581104 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.54
NUP85-216ENST00000581104 HDAC1Q13547 482 aaPredicted RBP11.71□□□□□ -0.54
NUP85-216ENST00000581104 POLA2Q14181 598 aa11.71□□□□□ -0.54
NUP85-216ENST00000581104 SSH3Q8TE77 659 aa11.71□□□□□ -0.54
NUP85-216ENST00000581104 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 CCDC93Q567U6 631 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 C7orf43Q8WVR3 580 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 SIL1Q9H173 461 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 RWDD1Q9H446 243 aaPredicted RBP11.7□□□□□ -0.54
NUP85-216ENST00000581104 COPRSQ9NQ92 184 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 PA2G4Q9UQ80 394 aaKnown RBP11.7□□□□□ -0.54
NUP85-216ENST00000581104 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP85-216ENST00000581104 OLFM4Q6UX06 510 aa11.7□□□□□ -0.54
NUP85-216ENST00000581104 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
NUP85-216ENST00000581104 LRRC37AA6NMS7 1700 aa11.69□□□□□ -0.54
NUP85-216ENST00000581104 EYA2O00167 538 aa11.69□□□□□ -0.54
NUP85-216ENST00000581104 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
NUP85-216ENST00000581104 RTKN2Q8IZC4 609 aa11.69□□□□□ -0.54
NUP85-216ENST00000581104 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
NUP85-216ENST00000581104 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
NUP85-216ENST00000581104 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
NUP85-216ENST00000581104 LRRC24Q50LG9 513 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 SLC51AQ86UW1 340 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 MPNDQ8N594 471 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 ANKRD2Q9GZV1 360 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 ANKIB1Q9P2G1 1089 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 NSFL1CQ9UNZ2 370 aaKnown RBP11.68□□□□□ -0.54
NUP85-216ENST00000581104 MROH5Q6ZUA9 1318 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
NUP85-216ENST00000581104 CIAO1O76071 339 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 CHRNDQ07001 517 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUP85-216ENST00000581104 OS9Q13438 667 aaPredicted RBP11.68□□□□□ -0.54
NUP85-216ENST00000581104 DPP8Q6V1X1 898 aaPredicted RBP11.68□□□□□ -0.54
NUP85-216ENST00000581104 RIPOR2Q9Y4F9 1068 aa11.68□□□□□ -0.54
NUP85-216ENST00000581104 XDHP47989 1333 aa11.67□□□□□ -0.54
NUP85-216ENST00000581104 GRIN3BO60391 1043 aa11.67□□□□□ -0.54
NUP85-216ENST00000581104 IL15P40933 162 aaPredicted RBP11.67□□□□□ -0.54
NUP85-216ENST00000581104 RGS3P49796 1198 aa11.67□□□□□ -0.54
NUP85-216ENST00000581104 GPSM2P81274 684 aa11.67□□□□□ -0.54
NUP85-216ENST00000581104 METTL24Q5JXM2 366 aa11.67□□□□□ -0.54
NUP85-216ENST00000581104 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
NUP85-216ENST00000581104 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
NUP85-216ENST00000581104 KCNJ4P48050 445 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 HSP90AB4PQ58FF6 505 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 ATG9AQ7Z3C6 839 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 GGA1Q9UJY5 639 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 EXOC6BQ9Y2D4 811 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 NOP58Q9Y2X3 529 aaKnown RBP11.66□□□□□ -0.54
NUP85-216ENST00000581104 TAF5LO75529 589 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 ATP2B4P23634 1241 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 FKBP4Q02790 459 aaKnown RBP eCLIP11.66□□□□□ -0.54
NUP85-216ENST00000581104 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 CEP126Q9P2H0 1117 aa11.66□□□□□ -0.54
NUP85-216ENST00000581104 FER1L6Q2WGJ9 1857 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 UFL1O94874 794 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 SMC5Q8IY18 1101 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 PSMD1Q99460 953 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 LEMD3Q9Y2U8 911 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
NUP85-216ENST00000581104 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 NFKBIEO00221 500 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 ERC1Q8IUD2 1116 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 TBC1D16Q8TBP0 767 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 PDE8BO95263 885 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 RASSF7Q02833 373 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 TFCP2Q12800 502 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 EYA3Q99504 573 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 RTFDC1Q9BY42 306 aaPredicted RBP11.64□□□□□ -0.55
NUP85-216ENST00000581104 POLLQ9UGP5 575 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
NUP85-216ENST00000581104 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 ZNF804BA4D1E1 1349 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 APBB1O00213 710 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 VGLL2Q8N8G2 317 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 GCC1Q96CN9 775 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 SASH1O94885 1247 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 UBE4AQ14139 1066 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 PUM3Q15397 648 aaKnown RBP11.63□□□□□ -0.55
NUP85-216ENST00000581104 ZNF277Q9NRM2 450 aaPredicted RBP11.63□□□□□ -0.55
NUP85-216ENST00000581104 AKAP2Q9Y2D5 859 aa11.63□□□□□ -0.55
NUP85-216ENST00000581104 SNAP23O00161 211 aa11.62□□□□□ -0.55
NUP85-216ENST00000581104 ATP2B3Q16720 1220 aa11.62□□□□□ -0.55
NUP85-216ENST00000581104 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
NUP85-216ENST00000581104 KIF1BPQ96EK5 621 aa11.62□□□□□ -0.55
NUP85-216ENST00000581104 GPR101Q96P66 508 aaPredicted RBP11.62□□□□□ -0.55
NUP85-216ENST00000581104 ZC3H12CQ9C0D7 883 aaKnown RBP11.62□□□□□ -0.55
NUP85-216ENST00000581104 WTIPA6NIX2 430 aaPredicted RBP11.62□□□□□ -0.55
NUP85-216ENST00000581104 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
NUP85-216ENST00000581104 PPIP5K2O43314 1243 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms