RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 SWT1Q5T5J6 900 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-212ENST00000577721 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
SMARCE1-212ENST00000577721 NBPF5PQ86XG9 351 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-212ENST00000577721 HEG1Q9ULI3 1381 aa9.2□□□□□ -0.94
SMARCE1-212ENST00000577721 TJP1Q07157 1748 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 BRCA1P38398 1863 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 FAM177BA6PVY3 158 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 FOXN1O15353 648 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 KCNQ3O43525 872 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 CAMTA2O94983 1202 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 SRGNP10124 158 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 PIP4K2AP48426 406 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 CCDC93Q567U6 631 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 LDHDQ86WU2 507 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 CRIPAKQ8N1N5 446 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 TAF1DQ9H5J8 278 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 LTBP3Q9NS15 1303 aa9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 TNRC6CQ9HCJ0 1690 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-212ENST00000577721 FAM181BA6NEQ2 426 aa9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 TMEM88BA6NKF7 163 aa9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 PPEF1O14829 653 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 NPR1P16066 1061 aa9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 CTCFP49711 727 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 TPTE2Q6XPS3 522 aa9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 ZNF277Q9NRM2 450 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 ZNF652Q9Y2D9 606 aa9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
SMARCE1-212ENST00000577721 KIF7Q2M1P5 1343 aa9.17□□□□□ -0.94
SMARCE1-212ENST00000577721 VEGFBP49765 207 aa9.17□□□□□ -0.94
SMARCE1-212ENST00000577721 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
SMARCE1-212ENST00000577721 RTF1Q92541 710 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-212ENST00000577721 GMPR2Q9P2T1 348 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-212ENST00000577721 HACL1Q9UJ83 578 aa9.17□□□□□ -0.94
SMARCE1-212ENST00000577721 MRC1P22897 1456 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 CNTNAP1P78357 1384 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 SNRPA1P09661 255 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 ALDH1B1P30837 517 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 EPHX2P34913 555 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 FKBP4Q02790 459 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 DEFB115Q30KQ5 88 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 BLOC1S3Q6QNY0 202 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 SYNE4Q8N205 404 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 CFAP53Q96M91 514 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 PRDM10Q9NQV6 1147 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 NIP7Q9Y221 180 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 ADAMTS7Q9UKP4 1686 aa9.16□□□□□ -0.94
SMARCE1-212ENST00000577721 SBF1O95248 1867 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 SCN11AQ9UI33 1791 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 PRAMEF22A3QJZ6 481 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 AXIN1O15169 862 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 S1PR4O95977 384 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 PRKAR2BP31323 418 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 LBX1P52954 281 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 MAP1SQ66K74 1059 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 OLFM4Q6UX06 510 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 PNMA8AQ86V59 439 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 CNTROBQ8N137 903 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 C7orf43Q8WVR3 580 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 DACH1Q9UI36 760 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 ABT1Q9ULW3 272 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 NUDCQ9Y266 331 aa9.15□□□□□ -0.94
SMARCE1-212ENST00000577721 PASKQ96RG2 1323 aa9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 ZNF541Q9H0D2 1346 aa9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 TLL1O43897 1013 aa9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 IARSP41252 1262 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 EIF6P56537 245 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 MCM10Q7L590 875 aa9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 JDP2Q8WYK2 163 aa9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 GJA3Q9Y6H8 435 aa9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
SMARCE1-212ENST00000577721 RNF123Q5XPI4 1314 aa9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 AFDNP55196 1824 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 U2AF1L5P0DN76 240 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 LMOD1P29536 600 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 U2AF1Q01081 240 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 MAP2K1Q02750 393 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 FOXC1Q12948 553 aa9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 GRM1Q13255 1194 aa9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 PDIA6Q15084 440 aa9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
SMARCE1-212ENST00000577721 WDR33Q9C0J8 1336 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 KLRG2A4D1S0 409 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 SPDYE16A6NNV3 312 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 FZD9O00144 591 aa9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 TCERG1O14776 1098 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 DCTN1Q14203 1278 aa9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 HLFQ16534 295 aa9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 RPGRQ92834 1020 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 BEGAINQ9BUH8 593 aa9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 RSPH6AQ9H0K4 717 aa9.12□□□□□ -0.95
SMARCE1-212ENST00000577721 RASSF10A6NK89 507 aa9.11□□□□□ -0.95
SMARCE1-212ENST00000577721 AVPP01185 164 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms