RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 CSF1RP07333 972 aa16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 GNAI3P08754 354 aa16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 TTLL11Q8NHH1 800 aa16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 LTBP1Q14766 1721 aa16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 SPEF2Q9C093 1822 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 PPIP5K2O43314 1243 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 POTEIP0CG38 1075 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 POTEJP0CG39 1038 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 RABL6Q3YEC7 729 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 GPC2Q8N158 579 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 RTFDC1Q9BY42 306 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 DDX19BQ9UMR2 479 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 ADAMTSL1Q8N6G6 1762 aa16.15■□□□□ 0.18
CNEP1R1-211ENST00000569647 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 HTRA3P83110 453 aa16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 AOC3Q16853 763 aa16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 MPNDQ8N594 471 aa16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 SUPT20HQ8NEM7 779 aa16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 VPS33BQ9H267 617 aa16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
CNEP1R1-211ENST00000569647 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 LMBR1LQ6UX01 489 aa16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 NIM1KQ8IY84 436 aa16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 HACL1Q9UJ83 578 aa16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
CNEP1R1-211ENST00000569647 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
CNEP1R1-211ENST00000569647 GREM2Q9H772 168 aa16.12■□□□□ 0.17
CNEP1R1-211ENST00000569647 GJA3Q9Y6H8 435 aa16.12■□□□□ 0.17
CNEP1R1-211ENST00000569647 GNAI2P04899 355 aa16.11■□□□□ 0.17
CNEP1R1-211ENST00000569647 KIAA2012Q0VF49 1180 aa16.11■□□□□ 0.17
CNEP1R1-211ENST00000569647 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
CNEP1R1-211ENST00000569647 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
CNEP1R1-211ENST00000569647 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
CNEP1R1-211ENST00000569647 SEC31BQ9NQW1 1179 aa16.11■□□□□ 0.17
CNEP1R1-211ENST00000569647 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
CNEP1R1-211ENST00000569647 EPHX2P34913 555 aa16.1■□□□□ 0.17
CNEP1R1-211ENST00000569647 RPS8P62241 208 aaKnown RBP16.1■□□□□ 0.17
CNEP1R1-211ENST00000569647 EAPPQ56P03 285 aaPredicted RBP16.1■□□□□ 0.17
CNEP1R1-211ENST00000569647 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
CNEP1R1-211ENST00000569647 ITGA6P23229 1130 aa16.09■□□□□ 0.17
CNEP1R1-211ENST00000569647 SCNN1DP51172 638 aa16.09■□□□□ 0.17
CNEP1R1-211ENST00000569647 MTX1Q13505 466 aa16.09■□□□□ 0.17
CNEP1R1-211ENST00000569647 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
CNEP1R1-211ENST00000569647 C1orf115Q9H7X2 142 aa16.09■□□□□ 0.17
CNEP1R1-211ENST00000569647 ZNRF3Q9ULT6 936 aa16.09■□□□□ 0.17
CNEP1R1-211ENST00000569647 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
CNEP1R1-211ENST00000569647 A0A1B0GUL6 1792 aa16.08■□□□□ 0.17
CNEP1R1-211ENST00000569647 SCN9AQ15858 1988 aa16.08■□□□□ 0.16
CNEP1R1-211ENST00000569647 GPSM2P81274 684 aa16.08■□□□□ 0.16
CNEP1R1-211ENST00000569647 CXCL9Q07325 125 aa16.08■□□□□ 0.16
CNEP1R1-211ENST00000569647 PNMA8AQ86V59 439 aaPredicted RBP16.08■□□□□ 0.16
CNEP1R1-211ENST00000569647 POLLQ9UGP5 575 aa16.08■□□□□ 0.16
CNEP1R1-211ENST00000569647 CHMP3Q9Y3E7 222 aa16.08■□□□□ 0.16
CNEP1R1-211ENST00000569647 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
CNEP1R1-211ENST00000569647 LMOD1P29536 600 aaPredicted RBP16.07■□□□□ 0.16
CNEP1R1-211ENST00000569647 IFIT5Q13325 482 aaKnown RBP16.07■□□□□ 0.16
CNEP1R1-211ENST00000569647 KLRG1Q96E93 195 aa16.07■□□□□ 0.16
CNEP1R1-211ENST00000569647 CDC5LQ99459 802 aaKnown RBP16.07■□□□□ 0.16
CNEP1R1-211ENST00000569647 PSME4Q14997 1843 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 YDJCA8MPS7 323 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 C6orf229H3BNL8 230 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 EPS15P42566 896 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 WASHC4Q2M389 1173 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 ANKRD18AQ8IVF6 992 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
CNEP1R1-211ENST00000569647 TRPM7Q96QT4 1865 aa16.05■□□□□ 0.16
CNEP1R1-211ENST00000569647 PASKQ96RG2 1323 aa16.05■□□□□ 0.16
CNEP1R1-211ENST00000569647 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
CNEP1R1-211ENST00000569647 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
CNEP1R1-211ENST00000569647 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
CNEP1R1-211ENST00000569647 PODXL2Q9NZ53 605 aa16.05■□□□□ 0.16
CNEP1R1-211ENST00000569647 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 RAD17O75943 681 aa16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 ITGBL1O95965 494 aaPredicted RBP16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 GPR101Q96P66 508 aaPredicted RBP16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 EYA3Q99504 573 aa16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 BSDC1Q9NW68 430 aaPredicted RBP16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 GPRC5DQ9NZD1 345 aa16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
CNEP1R1-211ENST00000569647 SRGAP3O43295 1099 aa16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 UFL1O94874 794 aa16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 GMPSP49915 693 aaPredicted RBP16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 PTPN12Q05209 780 aaKnown RBP16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms