RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ZNF428Q96B54 188 aa6.14□□□□□ -1.43
CLK3-219ENST00000567805 TAF1DQ9H5J8 278 aaPredicted RBP6.14□□□□□ -1.43
CLK3-219ENST00000567805 HACL1Q9UJ83 578 aa6.14□□□□□ -1.43
CLK3-219ENST00000567805 MAP3K2Q9Y2U5 619 aa6.14□□□□□ -1.43
CLK3-219ENST00000567805 SALL2Q9Y467 1007 aaPredicted RBP6.14□□□□□ -1.43
CLK3-219ENST00000567805 TRPM7Q96QT4 1865 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 PDE8AO60658 829 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 EPHX2P34913 555 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 KIAA2012Q0VF49 1180 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 AOC3Q16853 763 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 CCDC152Q4G0S7 254 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 PNMA8AQ86V59 439 aaPredicted RBP6.13□□□□□ -1.43
CLK3-219ENST00000567805 CELF1Q92879 486 aaKnown RBP6.13□□□□□ -1.43
CLK3-219ENST00000567805 MYH16Q9H6N6 1097 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 GJA3Q9Y6H8 435 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 CDHR2Q9BYE9 1310 aa6.13□□□□□ -1.43
CLK3-219ENST00000567805 A0A1B0GUL6 1792 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 VAMP4O75379 141 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 IGKV5-2P06315 115 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 LMOD1P29536 600 aaPredicted RBP6.12□□□□□ -1.43
CLK3-219ENST00000567805 SCNN1DP51172 638 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 RPS8P62241 208 aaKnown RBP6.12□□□□□ -1.43
CLK3-219ENST00000567805 HTRA3P83110 453 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 EXOSC9Q06265 439 aaKnown RBP6.12□□□□□ -1.43
CLK3-219ENST00000567805 FLIIQ13045 1269 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 FKBP5Q13451 457 aaPredicted RBP6.12□□□□□ -1.43
CLK3-219ENST00000567805 EAPPQ56P03 285 aaPredicted RBP6.12□□□□□ -1.43
CLK3-219ENST00000567805 G2E3Q7L622 706 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 KLRG1Q96E93 195 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 ZNRF3Q9ULT6 936 aa6.12□□□□□ -1.43
CLK3-219ENST00000567805 NSFL1CQ9UNZ2 370 aaKnown RBP6.12□□□□□ -1.43
CLK3-219ENST00000567805 SCN9AQ15858 1988 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 RTL9Q8NET4 1388 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 ZNF521Q96K83 1311 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 PASKQ96RG2 1323 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 POTEFA5A3E0 1075 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 NEURL1BA8MQ27 555 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 CTSWP56202 376 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 CXCL9Q07325 125 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 TNIP1Q15025 636 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 WASHC4Q2M389 1173 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 CWF19L2Q2TBE0 894 aaKnown RBP6.11□□□□□ -1.43
CLK3-219ENST00000567805 USP50Q70EL3 339 aaPredicted RBP6.11□□□□□ -1.43
CLK3-219ENST00000567805 JMYQ8N9B5 988 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 LINS1Q8NG48 757 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 DNAAF4Q8WXU2 420 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 EYA3Q99504 573 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 SEC31BQ9NQW1 1179 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 PODXL2Q9NZ53 605 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 GPRC5DQ9NZD1 345 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 POLLQ9UGP5 575 aa6.11□□□□□ -1.43
CLK3-219ENST00000567805 YDJCA8MPS7 323 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 C6orf229H3BNL8 230 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 H7C1W4 665 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 RAD17O75943 681 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 ITGBL1O95965 494 aaPredicted RBP6.1□□□□□ -1.43
CLK3-219ENST00000567805 EPS15P42566 896 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 ATN1P54259 1190 aaPredicted RBP6.1□□□□□ -1.43
CLK3-219ENST00000567805 GPSM2P81274 684 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 GCKRQ14397 625 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 CIAPIN1Q6FI81 312 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 UBE3BQ7Z3V4 1068 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 ANKRD18AQ8IVF6 992 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 TTLL11Q8NHH1 800 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 TBC1D16Q8TBP0 767 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
CLK3-219ENST00000567805 CDC5LQ99459 802 aaKnown RBP6.1□□□□□ -1.43
CLK3-219ENST00000567805 ADARB2Q9NS39 739 aaKnown RBP6.1□□□□□ -1.43
CLK3-219ENST00000567805 ANKIB1Q9P2G1 1089 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 FBXO3Q9UK99 471 aa6.1□□□□□ -1.43
CLK3-219ENST00000567805 ZNF646O15015 1829 aaPredicted RBP6.1□□□□□ -1.43
CLK3-219ENST00000567805 POLR2AP24928 1970 aaKnown RBP6.09□□□□□ -1.43
CLK3-219ENST00000567805 XDHP47989 1333 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 TMEM88BA6NKF7 163 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 E9PSI1 815 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 UFL1O94874 794 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 GMPSP49915 693 aaPredicted RBP6.09□□□□□ -1.43
CLK3-219ENST00000567805 CASP7P55210 303 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 MAP1SQ66K74 1059 aaPredicted RBP6.09□□□□□ -1.43
CLK3-219ENST00000567805 CNTROBQ8N137 903 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 CCDC85AQ96PX6 553 aaPredicted RBP6.09□□□□□ -1.43
CLK3-219ENST00000567805 PLA2G12BQ9BX93 195 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 ZC3H12CQ9C0D7 883 aaKnown RBP6.09□□□□□ -1.43
CLK3-219ENST00000567805 GREM2Q9H772 168 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 DBNDD1Q9H9R9 158 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 BSDC1Q9NW68 430 aaPredicted RBP6.09□□□□□ -1.43
CLK3-219ENST00000567805 GGA1Q9UJY5 639 aa6.09□□□□□ -1.43
CLK3-219ENST00000567805 ZNF609O15014 1411 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 CNTNAP1P78357 1384 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 F6X3S4 739 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 G3V3G9 751 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 H7C1D1 291 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 CCER2I3L3R5 266 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 PSMD14O00487 310 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 RIMBP2O15034 1052 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 ECE2O60344 883 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 CSF1RP07333 972 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 ITGA6P23229 1130 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 ATP2B4P23634 1241 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms