RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 FKBP4Q02790 459 aaKnown RBP eCLIP25.31■■□□□ 1.64
RNF40-210ENST00000566811 SUPT20HQ8NEM7 779 aa25.31■■□□□ 1.64
RNF40-210ENST00000566811 VPS33BQ9H267 617 aa25.31■■□□□ 1.64
RNF40-210ENST00000566811 ZBTB40Q9NUA8 1239 aa25.31■■□□□ 1.64
RNF40-210ENST00000566811 TIAM2Q8IVF5 1701 aa25.3■■□□□ 1.64
RNF40-210ENST00000566811 ARHGAP27Q6ZUM4 889 aa25.3■■□□□ 1.64
RNF40-210ENST00000566811 PODXL2Q9NZ53 605 aa25.3■■□□□ 1.64
RNF40-210ENST00000566811 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
RNF40-210ENST00000566811 XDHP47989 1333 aa25.3■■□□□ 1.64
RNF40-210ENST00000566811 DUOX1Q9NRD9 1551 aa25.3■■□□□ 1.64
RNF40-210ENST00000566811 SRGAP3O43295 1099 aa25.29■■□□□ 1.64
RNF40-210ENST00000566811 DPP8Q6V1X1 898 aaPredicted RBP25.29■■□□□ 1.64
RNF40-210ENST00000566811 LDHAL6AQ6ZMR3 332 aa25.29■■□□□ 1.64
RNF40-210ENST00000566811 MPNDQ8N594 471 aa25.29■■□□□ 1.64
RNF40-210ENST00000566811 ANKRD2Q9GZV1 360 aa25.29■■□□□ 1.64
RNF40-210ENST00000566811 ZNF219Q9P2Y4 722 aaPredicted RBP25.29■■□□□ 1.64
RNF40-210ENST00000566811 NFKBIEO00221 500 aa25.28■■□□□ 1.64
RNF40-210ENST00000566811 RTFDC1Q9BY42 306 aaPredicted RBP25.28■■□□□ 1.64
RNF40-210ENST00000566811 RPAP2Q8IXW5 612 aaPredicted RBP25.27■■□□□ 1.64
RNF40-210ENST00000566811 CNNM1Q9NRU3 951 aa25.27■■□□□ 1.64
RNF40-210ENST00000566811 ZC3H4Q9UPT8 1303 aaKnown RBP25.27■■□□□ 1.64
RNF40-210ENST00000566811 LMNB1P20700 586 aa25.26■■□□□ 1.63
RNF40-210ENST00000566811 RFX5P48382 616 aaPredicted RBP25.26■■□□□ 1.63
RNF40-210ENST00000566811 COPRSQ9NQ92 184 aa25.26■■□□□ 1.63
RNF40-210ENST00000566811 MINPP1Q9UNW1 487 aa25.26■■□□□ 1.63
RNF40-210ENST00000566811 MROH5Q6ZUA9 1318 aa25.26■■□□□ 1.63
RNF40-210ENST00000566811 CIAO1O76071 339 aa25.25■■□□□ 1.63
RNF40-210ENST00000566811 ATP8B2P98198 1209 aa25.25■■□□□ 1.63
RNF40-210ENST00000566811 PTPN12Q05209 780 aaKnown RBP25.25■■□□□ 1.63
RNF40-210ENST00000566811 ANKIB1Q9P2G1 1089 aa25.25■■□□□ 1.63
RNF40-210ENST00000566811 HMMRO75330 724 aa25.24■■□□□ 1.63
RNF40-210ENST00000566811 CEP85Q6P2H3 762 aa25.24■■□□□ 1.63
RNF40-210ENST00000566811 SSH3Q8TE77 659 aa25.24■■□□□ 1.63
RNF40-210ENST00000566811 EYA3Q99504 573 aa25.24■■□□□ 1.63
RNF40-210ENST00000566811 NSFL1CQ9UNZ2 370 aaKnown RBP25.24■■□□□ 1.63
RNF40-210ENST00000566811 ATP2B4P23634 1241 aa25.23■■□□□ 1.63
RNF40-210ENST00000566811 OLFM4Q6UX06 510 aa25.23■■□□□ 1.63
RNF40-210ENST00000566811 C1orf115Q9H7X2 142 aa25.23■■□□□ 1.63
RNF40-210ENST00000566811 GGA1Q9UJY5 639 aa25.23■■□□□ 1.63
RNF40-210ENST00000566811 LEMD3Q9Y2U8 911 aa25.23■■□□□ 1.63
RNF40-210ENST00000566811 EYA2O00167 538 aa25.22■■□□□ 1.63
RNF40-210ENST00000566811 TOMM70O94826 608 aa25.22■■□□□ 1.63
RNF40-210ENST00000566811 APLP1P51693 650 aa25.22■■□□□ 1.63
RNF40-210ENST00000566811 GPSM2P81274 684 aa25.22■■□□□ 1.63
RNF40-210ENST00000566811 POLA2Q14181 598 aa25.22■■□□□ 1.63
RNF40-210ENST00000566811 ZNF594Q96JF6 807 aaPredicted RBP25.22■■□□□ 1.63
RNF40-210ENST00000566811 NMRK2Q9NPI5 230 aa25.22■■□□□ 1.63
RNF40-210ENST00000566811 RASSF7Q02833 373 aa25.21■■□□□ 1.63
RNF40-210ENST00000566811 CHRNDQ07001 517 aa25.21■■□□□ 1.63
RNF40-210ENST00000566811 RIPOR2Q9Y4F9 1068 aa25.21■■□□□ 1.63
RNF40-210ENST00000566811 MED23Q9ULK4 1368 aa25.2■■□□□ 1.63
RNF40-210ENST00000566811 PNMA6EA0A0J9YXQ4 647 aa25.2■■□□□ 1.62
RNF40-210ENST00000566811 IL15P40933 162 aaPredicted RBP25.2■■□□□ 1.62
RNF40-210ENST00000566811 IARSP41252 1262 aaKnown RBP25.2■■□□□ 1.62
RNF40-210ENST00000566811 DNAJC5GQ8N7S2 189 aa25.2■■□□□ 1.62
RNF40-210ENST00000566811 CRBNQ96SW2 442 aa25.2■■□□□ 1.62
RNF40-210ENST00000566811 UFL1O94874 794 aa25.19■■□□□ 1.62
RNF40-210ENST00000566811 TBC1D16Q8TBP0 767 aa25.19■■□□□ 1.62
RNF40-210ENST00000566811 ARAP2Q8WZ64 1704 aa25.19■■□□□ 1.62
RNF40-210ENST00000566811 KCNJ4P48050 445 aa25.18■■□□□ 1.62
RNF40-210ENST00000566811 KIAA2012Q0VF49 1180 aa25.18■■□□□ 1.62
RNF40-210ENST00000566811 PSME4Q14997 1843 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 C6orf229H3BNL8 230 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 WASHC4Q2M389 1173 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 HSP90AB4PQ58FF6 505 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 METTL24Q5JXM2 366 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 C9orf131Q5VYM1 1079 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 KLHDC4Q8TBB5 520 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 ZNF277Q9NRM2 450 aaPredicted RBP25.17■■□□□ 1.62
RNF40-210ENST00000566811 RNF181Q9P0P0 153 aa25.17■■□□□ 1.62
RNF40-210ENST00000566811 ZNF804BA4D1E1 1349 aa25.16■■□□□ 1.62
RNF40-210ENST00000566811 PPIP5K2O43314 1243 aa25.16■■□□□ 1.62
RNF40-210ENST00000566811 UBE4AQ14139 1066 aa25.16■■□□□ 1.62
RNF40-210ENST00000566811 JDP2Q8WYK2 163 aa25.16■■□□□ 1.62
RNF40-210ENST00000566811 PUS3Q9BZE2 481 aaKnown RBP25.16■■□□□ 1.62
RNF40-210ENST00000566811 POLLQ9UGP5 575 aa25.16■■□□□ 1.62
RNF40-210ENST00000566811 PDE8BO95263 885 aa25.15■■□□□ 1.62
RNF40-210ENST00000566811 LRRC24Q50LG9 513 aa25.15■■□□□ 1.62
RNF40-210ENST00000566811 C15orf52Q6ZUT6 534 aaKnown RBP25.15■■□□□ 1.62
RNF40-210ENST00000566811 LARGE2Q8N3Y3 721 aa25.15■■□□□ 1.62
RNF40-210ENST00000566811 VGLL2Q8N8G2 317 aa25.15■■□□□ 1.62
RNF40-210ENST00000566811 ZC3H12CQ9C0D7 883 aaKnown RBP25.15■■□□□ 1.62
RNF40-210ENST00000566811 SIL1Q9H173 461 aa25.15■■□□□ 1.62
RNF40-210ENST00000566811 NOP58Q9Y2X3 529 aaKnown RBP25.15■■□□□ 1.62
RNF40-210ENST00000566811 G3BP1Q13283 466 aaKnown RBP eCLIP25.14■■□□□ 1.62
RNF40-210ENST00000566811 PUM3Q15397 648 aaKnown RBP25.14■■□□□ 1.62
RNF40-210ENST00000566811 ATG9AQ7Z3C6 839 aa25.14■■□□□ 1.62
RNF40-210ENST00000566811 SLC51AQ86UW1 340 aa25.14■■□□□ 1.62
RNF40-210ENST00000566811 ERC1Q8IUD2 1116 aa25.14■■□□□ 1.62
RNF40-210ENST00000566811 CEP126Q9P2H0 1117 aa25.14■■□□□ 1.62
RNF40-210ENST00000566811 PA2G4Q9UQ80 394 aaKnown RBP25.13■■□□□ 1.61
RNF40-210ENST00000566811 AOC3Q16853 763 aa25.12■■□□□ 1.61
RNF40-210ENST00000566811 NIM1KQ8IY84 436 aa25.12■■□□□ 1.61
RNF40-210ENST00000566811 PRELPP51888 382 aa25.11■■□□□ 1.61
RNF40-210ENST00000566811 RBM46Q8TBY0 533 aaKnown RBP25.11■■□□□ 1.61
RNF40-210ENST00000566811 AKAP2Q9Y2D5 859 aa25.11■■□□□ 1.61
RNF40-210ENST00000566811 MYH13Q9UKX3 1938 aa25.11■■□□□ 1.61
RNF40-210ENST00000566811 SURF6O75683 361 aaKnown RBP25.1■■□□□ 1.61
RNF40-210ENST00000566811 OS9Q13438 667 aaPredicted RBP25.1■■□□□ 1.61
RNF40-210ENST00000566811 LPIN2Q92539 896 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms