RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 RTFDC1Q9BY42 306 aaPredicted RBP17.22■□□□□ 0.35
SPG7-215ENST00000566682 BICC1Q9H694 974 aaKnown RBP17.22■□□□□ 0.35
SPG7-215ENST00000566682 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
SPG7-215ENST00000566682 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
SPG7-215ENST00000566682 IFIT5Q13325 482 aaKnown RBP17.21■□□□□ 0.35
SPG7-215ENST00000566682 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
SPG7-215ENST00000566682 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.34
SPG7-215ENST00000566682 UBTFL1P0CB47 393 aaPredicted RBP17.2■□□□□ 0.34
SPG7-215ENST00000566682 CCDC57Q2TAC2 916 aa17.2■□□□□ 0.34
SPG7-215ENST00000566682 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
SPG7-215ENST00000566682 PIP4P2Q8N4L2 257 aa17.2■□□□□ 0.34
SPG7-215ENST00000566682 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
SPG7-215ENST00000566682 ZNF526Q8TF50 670 aaPredicted RBP17.2■□□□□ 0.34
SPG7-215ENST00000566682 MEIS3Q99687 375 aa17.2■□□□□ 0.34
SPG7-215ENST00000566682 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 LTBP1Q14766 1721 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 AOC3Q16853 763 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
SPG7-215ENST00000566682 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
SPG7-215ENST00000566682 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 POLLQ9UGP5 575 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 MINPP1Q9UNW1 487 aa17.19■□□□□ 0.34
SPG7-215ENST00000566682 PPIP5K2O43314 1243 aa17.18■□□□□ 0.34
SPG7-215ENST00000566682 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
SPG7-215ENST00000566682 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
SPG7-215ENST00000566682 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
SPG7-215ENST00000566682 COL4A5P29400 1685 aa17.17■□□□□ 0.34
SPG7-215ENST00000566682 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
SPG7-215ENST00000566682 RLBP1P12271 317 aa17.17■□□□□ 0.34
SPG7-215ENST00000566682 TBC1D16Q8TBP0 767 aa17.17■□□□□ 0.34
SPG7-215ENST00000566682 GPBP1L1Q9HC44 474 aaPredicted RBP17.17■□□□□ 0.34
SPG7-215ENST00000566682 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
SPG7-215ENST00000566682 XDHP47989 1333 aa17.17■□□□□ 0.34
SPG7-215ENST00000566682 GLTPD2A6NH11 291 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 SPDYE2BA6NHP3 402 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 GNAI3P08754 354 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 SPDYE6P0CI01 402 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 WASHC4Q2M389 1173 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 DPY19L2Q6NUT2 758 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 GGA1Q9UJY5 639 aa17.16■□□□□ 0.34
SPG7-215ENST00000566682 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
SPG7-215ENST00000566682 FZD9O00144 591 aa17.15■□□□□ 0.34
SPG7-215ENST00000566682 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
SPG7-215ENST00000566682 PLIN1O60240 522 aa17.15■□□□□ 0.34
SPG7-215ENST00000566682 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
SPG7-215ENST00000566682 GPR101Q96P66 508 aaPredicted RBP17.15■□□□□ 0.34
SPG7-215ENST00000566682 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
SPG7-215ENST00000566682 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
SPG7-215ENST00000566682 UFL1O94874 794 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 MS4A1P11836 297 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 CHRNDQ07001 517 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 EYA3Q99504 573 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 ANKRD2Q9GZV1 360 aa17.14■□□□□ 0.33
SPG7-215ENST00000566682 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
SPG7-215ENST00000566682 DDNO94850 711 aaPredicted RBP17.13■□□□□ 0.33
SPG7-215ENST00000566682 PUS3Q9BZE2 481 aaKnown RBP17.13■□□□□ 0.33
SPG7-215ENST00000566682 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
SPG7-215ENST00000566682 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
SPG7-215ENST00000566682 TAF5LO75529 589 aa17.12■□□□□ 0.33
SPG7-215ENST00000566682 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
SPG7-215ENST00000566682 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
SPG7-215ENST00000566682 HELBQ8NG08 1087 aaPredicted RBP17.12■□□□□ 0.33
SPG7-215ENST00000566682 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
SPG7-215ENST00000566682 RRAGCQ9HB90 399 aa17.12■□□□□ 0.33
SPG7-215ENST00000566682 NMRK2Q9NPI5 230 aa17.12■□□□□ 0.33
SPG7-215ENST00000566682 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
SPG7-215ENST00000566682 LEMD3Q9Y2U8 911 aa17.12■□□□□ 0.33
SPG7-215ENST00000566682 ZNF541Q9H0D2 1346 aa17.12■□□□□ 0.33
SPG7-215ENST00000566682 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
SPG7-215ENST00000566682 GNAI2P04899 355 aa17.11■□□□□ 0.33
SPG7-215ENST00000566682 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
SPG7-215ENST00000566682 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
SPG7-215ENST00000566682 RIPOR2Q9Y4F9 1068 aa17.11■□□□□ 0.33
SPG7-215ENST00000566682 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
SPG7-215ENST00000566682 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
SPG7-215ENST00000566682 DOK7Q18PE1 504 aa17.1■□□□□ 0.33
SPG7-215ENST00000566682 LRRC24Q50LG9 513 aa17.1■□□□□ 0.33
SPG7-215ENST00000566682 DBNDD1Q9H9R9 158 aa17.1■□□□□ 0.33
SPG7-215ENST00000566682 ZNF804BA4D1E1 1349 aa17.1■□□□□ 0.33
SPG7-215ENST00000566682 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
SPG7-215ENST00000566682 SNAP23O00161 211 aa17.09■□□□□ 0.33
SPG7-215ENST00000566682 CXCL9Q07325 125 aa17.09■□□□□ 0.33
SPG7-215ENST00000566682 MED23Q9ULK4 1368 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 POTECB2RU33 542 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 G3V3G9 751 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 KIF3CO14782 793 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 ECE2O60344 883 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 KCNJ4P48050 445 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms