RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 SPEF2Q9C093 1822 aa23.25■■□□□ 1.31
FANCA-212ENST00000563513 SURF6O75683 361 aaKnown RBP23.25■■□□□ 1.31
FANCA-212ENST00000563513 CIAO1O76071 339 aa23.25■■□□□ 1.31
FANCA-212ENST00000563513 IGHDP01880 384 aa23.25■■□□□ 1.31
FANCA-212ENST00000563513 CNNM1Q9NRU3 951 aa23.25■■□□□ 1.31
FANCA-212ENST00000563513 SNED1Q8TER0 1413 aa23.25■■□□□ 1.31
FANCA-212ENST00000563513 YBX3P16989 372 aaKnown RBP eCLIP23.24■■□□□ 1.31
FANCA-212ENST00000563513 DCTPP1Q9H773 170 aa23.24■■□□□ 1.31
FANCA-212ENST00000563513 GPSM2P81274 684 aa23.23■■□□□ 1.31
FANCA-212ENST00000563513 CHRNDQ07001 517 aa23.23■■□□□ 1.31
FANCA-212ENST00000563513 EXOC6BQ9Y2D4 811 aa23.23■■□□□ 1.31
FANCA-212ENST00000563513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.23■■□□□ 1.31
FANCA-212ENST00000563513 LRRC37AA6NMS7 1700 aa23.22■■□□□ 1.31
FANCA-212ENST00000563513 GOLGB1Q14789 3259 aaKnown RBP23.22■■□□□ 1.31
FANCA-212ENST00000563513 WTIPA6NIX2 430 aaPredicted RBP23.22■■□□□ 1.31
FANCA-212ENST00000563513 SASH1O94885 1247 aa23.22■■□□□ 1.31
FANCA-212ENST00000563513 IL15P40933 162 aaPredicted RBP23.22■■□□□ 1.31
FANCA-212ENST00000563513 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
FANCA-212ENST00000563513 CC2D2BQ6DHV5 1058 aa23.22■■□□□ 1.31
FANCA-212ENST00000563513 HELBQ8NG08 1087 aaPredicted RBP23.22■■□□□ 1.31
FANCA-212ENST00000563513 TAF5LO75529 589 aa23.21■■□□□ 1.31
FANCA-212ENST00000563513 G3BP1Q13283 466 aaKnown RBP eCLIP23.21■■□□□ 1.31
FANCA-212ENST00000563513 VGLL2Q8N8G2 317 aa23.21■■□□□ 1.31
FANCA-212ENST00000563513 PODXL2Q9NZ53 605 aa23.21■■□□□ 1.31
FANCA-212ENST00000563513 ARFGEF1Q9Y6D6 1849 aa23.2■■□□□ 1.3
FANCA-212ENST00000563513 MROH5Q6ZUA9 1318 aa23.2■■□□□ 1.3
FANCA-212ENST00000563513 RWDD1Q9H446 243 aaPredicted RBP23.2■■□□□ 1.3
FANCA-212ENST00000563513 SNAP23O00161 211 aa23.19■■□□□ 1.3
FANCA-212ENST00000563513 CCDC93Q567U6 631 aa23.19■■□□□ 1.3
FANCA-212ENST00000563513 METTL24Q5JXM2 366 aa23.19■■□□□ 1.3
FANCA-212ENST00000563513 MPNDQ8N594 471 aa23.19■■□□□ 1.3
FANCA-212ENST00000563513 ANKRD2Q9GZV1 360 aa23.19■■□□□ 1.3
FANCA-212ENST00000563513 NSFL1CQ9UNZ2 370 aaKnown RBP23.19■■□□□ 1.3
FANCA-212ENST00000563513 PDE8BO95263 885 aa23.18■■□□□ 1.3
FANCA-212ENST00000563513 TFCP2Q12800 502 aa23.18■■□□□ 1.3
FANCA-212ENST00000563513 POLLQ9UGP5 575 aa23.18■■□□□ 1.3
FANCA-212ENST00000563513 LTBP1Q14766 1721 aa23.18■■□□□ 1.3
FANCA-212ENST00000563513 XDHP47989 1333 aa23.17■■□□□ 1.3
FANCA-212ENST00000563513 SOGA3Q5TF21 947 aa23.17■■□□□ 1.3
FANCA-212ENST00000563513 RTKN2Q8IZC4 609 aa23.17■■□□□ 1.3
FANCA-212ENST00000563513 RTFDC1Q9BY42 306 aaPredicted RBP23.17■■□□□ 1.3
FANCA-212ENST00000563513 ANKIB1Q9P2G1 1089 aa23.17■■□□□ 1.3
FANCA-212ENST00000563513 A0A1B0GUL6 1792 aa23.17■■□□□ 1.3
FANCA-212ENST00000563513 RAB11FIP3O75154 756 aa23.16■■□□□ 1.3
FANCA-212ENST00000563513 GRIPAP1Q4V328 841 aa23.16■■□□□ 1.3
FANCA-212ENST00000563513 HSP90AB4PQ58FF6 505 aa23.16■■□□□ 1.3
FANCA-212ENST00000563513 DPP8Q6V1X1 898 aaPredicted RBP23.16■■□□□ 1.3
FANCA-212ENST00000563513 SMC5Q8IY18 1101 aa23.16■■□□□ 1.3
FANCA-212ENST00000563513 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
FANCA-212ENST00000563513 TBC1D16Q8TBP0 767 aa23.16■■□□□ 1.3
FANCA-212ENST00000563513 TMX4Q9H1E5 349 aaPredicted RBP23.16■■□□□ 1.3
FANCA-212ENST00000563513 CEP126Q9P2H0 1117 aa23.16■■□□□ 1.3
FANCA-212ENST00000563513 DUOX1Q9NRD9 1551 aa23.15■■□□□ 1.3
FANCA-212ENST00000563513 NFKBIEO00221 500 aa23.15■■□□□ 1.3
FANCA-212ENST00000563513 FGFR2P21802 821 aa23.15■■□□□ 1.3
FANCA-212ENST00000563513 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
FANCA-212ENST00000563513 RHPN1Q8TCX5 695 aa23.15■■□□□ 1.3
FANCA-212ENST00000563513 LEMD3Q9Y2U8 911 aa23.15■■□□□ 1.3
FANCA-212ENST00000563513 FER1L6Q2WGJ9 1857 aa23.14■■□□□ 1.29
FANCA-212ENST00000563513 APBB1O00213 710 aa23.14■■□□□ 1.29
FANCA-212ENST00000563513 ATP2B4P23634 1241 aa23.14■■□□□ 1.29
FANCA-212ENST00000563513 GPR162Q16538 588 aa23.14■■□□□ 1.29
FANCA-212ENST00000563513 GPR101Q96P66 508 aaPredicted RBP23.14■■□□□ 1.29
FANCA-212ENST00000563513 PSMD1Q99460 953 aa23.14■■□□□ 1.29
FANCA-212ENST00000563513 GGA1Q9UJY5 639 aa23.14■■□□□ 1.29
FANCA-212ENST00000563513 ZNF804BA4D1E1 1349 aa23.13■■□□□ 1.29
FANCA-212ENST00000563513 IRS2Q9Y4H2 1338 aa23.13■■□□□ 1.29
FANCA-212ENST00000563513 PRELPP51888 382 aa23.13■■□□□ 1.29
FANCA-212ENST00000563513 FKBP4Q02790 459 aaKnown RBP eCLIP23.13■■□□□ 1.29
FANCA-212ENST00000563513 UBE4AQ14139 1066 aa23.13■■□□□ 1.29
FANCA-212ENST00000563513 ERC1Q8IUD2 1116 aa23.13■■□□□ 1.29
FANCA-212ENST00000563513 GCC1Q96CN9 775 aa23.13■■□□□ 1.29
FANCA-212ENST00000563513 UFL1O94874 794 aa23.12■■□□□ 1.29
FANCA-212ENST00000563513 ARHGAP27Q6ZUM4 889 aa23.12■■□□□ 1.29
FANCA-212ENST00000563513 KIF1BPQ96EK5 621 aa23.12■■□□□ 1.29
FANCA-212ENST00000563513 PPP4R2Q9NY27 417 aa23.12■■□□□ 1.29
FANCA-212ENST00000563513 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
FANCA-212ENST00000563513 C6orf229H3BNL8 230 aa23.11■■□□□ 1.29
FANCA-212ENST00000563513 SMARCA5O60264 1052 aaPredicted RBP23.11■■□□□ 1.29
FANCA-212ENST00000563513 KLRK1P26718 216 aa23.11■■□□□ 1.29
FANCA-212ENST00000563513 TIMM10P62072 90 aa23.11■■□□□ 1.29
FANCA-212ENST00000563513 PUM3Q15397 648 aaKnown RBP23.11■■□□□ 1.29
FANCA-212ENST00000563513 TXNRD3Q86VQ6 643 aa23.11■■□□□ 1.29
FANCA-212ENST00000563513 GPR108Q9NPR9 543 aa23.11■■□□□ 1.29
FANCA-212ENST00000563513 LTBP3Q9NS15 1303 aa23.1■■□□□ 1.29
FANCA-212ENST00000563513 RASSF7Q02833 373 aa23.1■■□□□ 1.29
FANCA-212ENST00000563513 B4GALNT3Q6L9W6 998 aa23.1■■□□□ 1.29
FANCA-212ENST00000563513 EAF2Q96CJ1 260 aaPredicted RBP23.1■■□□□ 1.29
FANCA-212ENST00000563513 LRRCC1Q9C099 1032 aa23.1■■□□□ 1.29
FANCA-212ENST00000563513 TAOK3Q9H2K8 898 aa23.1■■□□□ 1.29
FANCA-212ENST00000563513 IL1RAPL2Q9NP60 686 aa23.1■■□□□ 1.29
FANCA-212ENST00000563513 ATP2B3Q16720 1220 aa23.09■■□□□ 1.29
FANCA-212ENST00000563513 TNNI3KQ59H18 835 aa23.09■■□□□ 1.29
FANCA-212ENST00000563513 C15orf52Q6ZUT6 534 aaKnown RBP23.09■■□□□ 1.29
FANCA-212ENST00000563513 LPIN2Q92539 896 aa23.09■■□□□ 1.29
FANCA-212ENST00000563513 ZNF277Q9NRM2 450 aaPredicted RBP23.09■■□□□ 1.29
FANCA-212ENST00000563513 AKAP2Q9Y2D5 859 aa23.09■■□□□ 1.29
FANCA-212ENST00000563513 FPGT-TNNI3KV9GXZ4 949 aa23.09■■□□□ 1.29
FANCA-212ENST00000563513 A0A1B0GUL7 405 aa23.08■■□□□ 1.29
FANCA-212ENST00000563513 GRIN3BO60391 1043 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms