RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 POTECB2RU33 542 aa20.35■□□□□ 0.85
COMMD4-206ENST00000562610 NBPF7P0C2Y1 421 aaPredicted RBP20.35■□□□□ 0.85
COMMD4-206ENST00000562610 IFIT5Q13325 482 aaKnown RBP20.35■□□□□ 0.85
COMMD4-206ENST00000562610 EPHA10Q5JZY3 1008 aa20.35■□□□□ 0.85
COMMD4-206ENST00000562610 LMBR1LQ6UX01 489 aa20.35■□□□□ 0.85
COMMD4-206ENST00000562610 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
COMMD4-206ENST00000562610 L3MBTL3Q96JM7 780 aaPredicted RBP20.35■□□□□ 0.85
COMMD4-206ENST00000562610 MPHOSPH8Q99549 860 aa20.35■□□□□ 0.85
COMMD4-206ENST00000562610 API5Q9BZZ5 524 aaKnown RBP20.35■□□□□ 0.85
COMMD4-206ENST00000562610 BSDC1Q9NW68 430 aaPredicted RBP20.35■□□□□ 0.85
COMMD4-206ENST00000562610 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
COMMD4-206ENST00000562610 ZNRF3Q9ULT6 936 aa20.35■□□□□ 0.85
COMMD4-206ENST00000562610 BRPF1P55201 1214 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-206ENST00000562610 SUCLG2Q96I99 432 aa20.34■□□□□ 0.85
COMMD4-206ENST00000562610 UTYO14607 1347 aa20.33■□□□□ 0.85
COMMD4-206ENST00000562610 CCT4P50991 539 aaKnown RBP20.33■□□□□ 0.85
COMMD4-206ENST00000562610 DBNDD1Q9H9R9 158 aa20.33■□□□□ 0.85
COMMD4-206ENST00000562610 HACL1Q9UJ83 578 aa20.33■□□□□ 0.85
COMMD4-206ENST00000562610 MINPP1Q9UNW1 487 aa20.33■□□□□ 0.85
COMMD4-206ENST00000562610 ADAMTSL1Q8N6G6 1762 aa20.32■□□□□ 0.84
COMMD4-206ENST00000562610 CCDC57Q2TAC2 916 aa20.32■□□□□ 0.84
COMMD4-206ENST00000562610 TAF7LQ5H9L4 462 aa20.32■□□□□ 0.84
COMMD4-206ENST00000562610 G3V3G9 751 aa20.31■□□□□ 0.84
COMMD4-206ENST00000562610 ECE2O60344 883 aa20.31■□□□□ 0.84
COMMD4-206ENST00000562610 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-206ENST00000562610 DCAF8Q5TAQ9 597 aa20.31■□□□□ 0.84
COMMD4-206ENST00000562610 SMC1BQ8NDV3 1235 aa20.31■□□□□ 0.84
COMMD4-206ENST00000562610 FRAT1Q92837 279 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-206ENST00000562610 ZC3H12CQ9C0D7 883 aaKnown RBP20.31■□□□□ 0.84
COMMD4-206ENST00000562610 BICC1Q9H694 974 aaKnown RBP20.31■□□□□ 0.84
COMMD4-206ENST00000562610 ZNF646O15015 1829 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-206ENST00000562610 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 BCAR3O75815 825 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 RAD17O75943 681 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 ATP2B4P23634 1241 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 CXCL9Q07325 125 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 DOK7Q18PE1 504 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 CIAPIN1Q6FI81 312 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 KAZALD1Q96I82 304 aa20.3■□□□□ 0.84
COMMD4-206ENST00000562610 EPHX2P34913 555 aa20.29■□□□□ 0.84
COMMD4-206ENST00000562610 FSTL1Q12841 308 aa20.29■□□□□ 0.84
COMMD4-206ENST00000562610 EAPPQ56P03 285 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-206ENST00000562610 ZNF594Q96JF6 807 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-206ENST00000562610 USP44Q9H0E7 712 aa20.29■□□□□ 0.84
COMMD4-206ENST00000562610 TAF1DQ9H5J8 278 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-206ENST00000562610 MED23Q9ULK4 1368 aa20.29■□□□□ 0.84
COMMD4-206ENST00000562610 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
COMMD4-206ENST00000562610 POTEIP0CG38 1075 aa20.28■□□□□ 0.84
COMMD4-206ENST00000562610 POTEJP0CG39 1038 aa20.28■□□□□ 0.84
COMMD4-206ENST00000562610 HSPA6P17066 643 aa20.28■□□□□ 0.84
COMMD4-206ENST00000562610 SCNN1DP51172 638 aa20.28■□□□□ 0.84
COMMD4-206ENST00000562610 TNIP1Q15025 636 aa20.28■□□□□ 0.84
COMMD4-206ENST00000562610 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
COMMD4-206ENST00000562610 ANKRD2Q9GZV1 360 aa20.28■□□□□ 0.84
COMMD4-206ENST00000562610 KCNJ4P48050 445 aa20.27■□□□□ 0.84
COMMD4-206ENST00000562610 CHRNDQ07001 517 aa20.27■□□□□ 0.84
COMMD4-206ENST00000562610 CNNM1Q9NRU3 951 aa20.27■□□□□ 0.84
COMMD4-206ENST00000562610 WTIPA6NIX2 430 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-206ENST00000562610 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-206ENST00000562610 TRIM27P14373 513 aa20.26■□□□□ 0.83
COMMD4-206ENST00000562610 GMPSP49915 693 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-206ENST00000562610 RABL6Q3YEC7 729 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-206ENST00000562610 ANKRD44Q8N8A2 993 aa20.26■□□□□ 0.83
COMMD4-206ENST00000562610 ZNF804BA4D1E1 1349 aa20.26■□□□□ 0.83
COMMD4-206ENST00000562610 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
COMMD4-206ENST00000562610 LDHAL6AQ6ZMR3 332 aa20.25■□□□□ 0.83
COMMD4-206ENST00000562610 PNMA8AQ86V59 439 aaPredicted RBP20.25■□□□□ 0.83
COMMD4-206ENST00000562610 LEMD3Q9Y2U8 911 aa20.25■□□□□ 0.83
COMMD4-206ENST00000562610 MYH13Q9UKX3 1938 aa20.25■□□□□ 0.83
COMMD4-206ENST00000562610 PSMD14O00487 310 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 EPS15P42566 896 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 ZKSCAN2Q63HK3 967 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 CHADLQ6NUI6 762 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 LDHDQ86WU2 507 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 HELBQ8NG08 1087 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-206ENST00000562610 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 GPRC5DQ9NZD1 345 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 TNNQ9UQP3 1299 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 CLEC11AQ9Y240 323 aa20.24■□□□□ 0.83
COMMD4-206ENST00000562610 TAF5LO75529 589 aa20.23■□□□□ 0.83
COMMD4-206ENST00000562610 KCNQ5Q9NR82 932 aa20.23■□□□□ 0.83
COMMD4-206ENST00000562610 PLIN1O60240 522 aa20.22■□□□□ 0.83
COMMD4-206ENST00000562610 KLRK1P26718 216 aa20.22■□□□□ 0.83
COMMD4-206ENST00000562610 INTS3Q68E01 1043 aaKnown RBP20.22■□□□□ 0.83
COMMD4-206ENST00000562610 MEIS3Q99687 375 aa20.22■□□□□ 0.83
COMMD4-206ENST00000562610 ZBTB12Q9Y330 459 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-206ENST00000562610 TRPM7Q96QT4 1865 aa20.22■□□□□ 0.83
COMMD4-206ENST00000562610 LRRFIP2Q9Y608 721 aaKnown RBP20.21■□□□□ 0.83
COMMD4-206ENST00000562610 ARAP2Q8WZ64 1704 aa20.2■□□□□ 0.82
COMMD4-206ENST00000562610 SNAP23O00161 211 aa20.2■□□□□ 0.82
COMMD4-206ENST00000562610 APLP1P51693 650 aa20.2■□□□□ 0.82
COMMD4-206ENST00000562610 TXNRD3Q86VQ6 643 aa20.2■□□□□ 0.82
COMMD4-206ENST00000562610 FTSJ3Q8IY81 847 aaKnown RBP20.2■□□□□ 0.82
COMMD4-206ENST00000562610 FBXW7Q969H0 707 aa20.2■□□□□ 0.82
COMMD4-206ENST00000562610 PUS3Q9BZE2 481 aaKnown RBP20.2■□□□□ 0.82
COMMD4-206ENST00000562610 ADARB2Q9NS39 739 aaKnown RBP20.2■□□□□ 0.82
COMMD4-206ENST00000562610 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
COMMD4-206ENST00000562610 USP50Q70EL3 339 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-206ENST00000562610 PODNQ7Z5L7 613 aa20.19■□□□□ 0.82
COMMD4-206ENST00000562610 MICALL2Q8IY33 904 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms