RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PLBD2Q8NHP8 589 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 OTUD7AQ8TE49 926 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-210ENST00000561817 KIAA1468Q9P260 1216 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 NOP58Q9Y2X3 529 aaKnown RBP8.12□□□□□ -1.11
CAPN3-210ENST00000561817 TUBGCP6Q96RT7 1819 aa8.12□□□□□ -1.11
CAPN3-210ENST00000561817 GRM8O00222 908 aa8.11□□□□□ -1.11
CAPN3-210ENST00000561817 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-210ENST00000561817 CYP19A1P11511 503 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-210ENST00000561817 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
CAPN3-210ENST00000561817 SUCLG2Q96I99 432 aa8.11□□□□□ -1.11
CAPN3-210ENST00000561817 TEX13AQ9BXU3 409 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-210ENST00000561817 ZNF831Q5JPB2 1677 aa8.11□□□□□ -1.11
CAPN3-210ENST00000561817 AFDNP55196 1824 aaKnown RBP8.1□□□□□ -1.11
CAPN3-210ENST00000561817 GSPT1P15170 499 aaKnown RBP8.1□□□□□ -1.11
CAPN3-210ENST00000561817 EPHA10Q5JZY3 1008 aa8.1□□□□□ -1.11
CAPN3-210ENST00000561817 RGS22Q8NE09 1264 aa8.1□□□□□ -1.11
CAPN3-210ENST00000561817 MYD88Q99836 296 aa8.1□□□□□ -1.11
CAPN3-210ENST00000561817 OSBPL3Q9H4L5 887 aa8.1□□□□□ -1.11
CAPN3-210ENST00000561817 WDR70Q9NW82 654 aa8.1□□□□□ -1.11
CAPN3-210ENST00000561817 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
CAPN3-210ENST00000561817 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
CAPN3-210ENST00000561817 H7C1W4 665 aa8.09□□□□□ -1.11
CAPN3-210ENST00000561817 RAD21O60216 631 aa8.09□□□□□ -1.11
CAPN3-210ENST00000561817 TRIM28Q13263 835 aaKnown RBP8.09□□□□□ -1.11
CAPN3-210ENST00000561817 E2F4Q16254 413 aa8.09□□□□□ -1.11
CAPN3-210ENST00000561817 RABL6Q3YEC7 729 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-210ENST00000561817 TTC22Q5TAA0 569 aa8.09□□□□□ -1.11
CAPN3-210ENST00000561817 ZFRQ96KR1 1074 aaKnown RBP8.09□□□□□ -1.11
CAPN3-210ENST00000561817 ISCA1Q9BUE6 129 aa8.09□□□□□ -1.11
CAPN3-210ENST00000561817 C9orf78Q9NZ63 289 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-210ENST00000561817 STAP2Q9UGK3 403 aa8.09□□□□□ -1.11
CAPN3-210ENST00000561817 SOWAHBA6NEL2 793 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 SRGAP3O43295 1099 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 MAP3K7O43318 606 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 RAB11FIP3O75154 756 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 STARD3NLO95772 234 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 RFX5P48382 616 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 NEXNQ0ZGT2 675 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 INTS5Q6P9B9 1019 aaKnown RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 SYTL4Q96C24 671 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 ACSBG1Q96GR2 724 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 LRRCC1Q9C099 1032 aa8.08□□□□□ -1.12
CAPN3-210ENST00000561817 BICC1Q9H694 974 aaKnown RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 COL5A3P25940 1745 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 MYH14Q7Z406 1995 aaKnown RBP8.08□□□□□ -1.12
CAPN3-210ENST00000561817 USP42Q9H9J4 1324 aaKnown RBP8.07□□□□□ -1.12
CAPN3-210ENST00000561817 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 KCNQ2O43526 872 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 TRIM37O94972 964 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 BCAMP50895 628 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 PDE1AP54750 535 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 FOXO4P98177 505 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 ITPK1Q13572 414 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 RHPN1Q8TCX5 695 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 IPO9Q96P70 1041 aaKnown RBP8.07□□□□□ -1.12
CAPN3-210ENST00000561817 SEPT9Q9UHD8 586 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-210ENST00000561817 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 ZBTB1Q9Y2K1 713 aa8.07□□□□□ -1.12
CAPN3-210ENST00000561817 MAP3K15Q6ZN16 1313 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 APBB1O00213 710 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 SURF6O75683 361 aaKnown RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 RGS20O76081 388 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 IL6STP40189 918 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 EIF5P55010 431 aaKnown RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 SIK1P57059 783 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 TCIRG1Q13488 830 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 TBC1D9Q6ZT07 1266 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 NYAP1Q6ZVC0 841 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 PTF1AQ7RTS3 328 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 CCDC191Q8NCU4 936 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 JARID2Q92833 1246 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 ZBTB3Q9H5J0 574 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 PA2G4Q9UQ80 394 aaKnown RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 ARIH1Q9Y4X5 557 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 RGPD3A6NKT7 1758 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-210ENST00000561817 ANKRD36CQ5JPF3 1778 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 RGPD4Q7Z3J3 1758 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 PALLDQ8WX93 1383 aa8.06□□□□□ -1.12
CAPN3-210ENST00000561817 AOX1Q06278 1338 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 A0A087WZG4 1122 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 SOCS7O14512 581 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 SASH1O94885 1247 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 SDSP20132 328 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 ANP32AP39687 249 aaKnown RBP8.05□□□□□ -1.12
CAPN3-210ENST00000561817 HLFQ16534 295 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 GIGYF2Q6Y7W6 1299 aaKnown RBP8.05□□□□□ -1.12
CAPN3-210ENST00000561817 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 UBE3BQ7Z3V4 1068 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 PACS2Q86VP3 889 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 SMARCC1Q92922 1105 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-210ENST00000561817 KIF1BPQ96EK5 621 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 SLC24A3Q9HC58 644 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 CWC25Q9NXE8 425 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-210ENST00000561817 LY75O60449 1722 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms