RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 MAPK8IP3Q9UPT6 1336 aa23.92■■□□□ 1.42
COMMD4-204ENST00000561662 RPS12P25398 132 aaKnown RBP23.92■■□□□ 1.42
COMMD4-204ENST00000561662 TMC4Q7Z404 712 aa23.92■■□□□ 1.42
COMMD4-204ENST00000561662 RASAL3Q86YV0 1011 aa23.92■■□□□ 1.42
COMMD4-204ENST00000561662 FAM89AQ96GI7 184 aa23.92■■□□□ 1.42
COMMD4-204ENST00000561662 KRT24Q2M2I5 525 aa23.91■■□□□ 1.42
COMMD4-204ENST00000561662 MOB2Q70IA6 237 aa23.9■■□□□ 1.42
COMMD4-204ENST00000561662 ATP5J2-PTCD1G3V325 749 aa23.89■■□□□ 1.41
COMMD4-204ENST00000561662 ANGEL2Q5VTE6 544 aaKnown RBP23.89■■□□□ 1.41
COMMD4-204ENST00000561662 DDX60Q8IY21 1712 aaKnown RBP23.89■■□□□ 1.41
COMMD4-204ENST00000561662 TBC1D8O95759 1140 aa23.88■■□□□ 1.41
COMMD4-204ENST00000561662 SCARF1Q14162 830 aa23.88■■□□□ 1.41
COMMD4-204ENST00000561662 TBC1D16Q8TBP0 767 aa23.88■■□□□ 1.41
COMMD4-204ENST00000561662 HDAC9Q9UKV0 1011 aa23.88■■□□□ 1.41
COMMD4-204ENST00000561662 SCN9AQ15858 1988 aa23.88■■□□□ 1.41
COMMD4-204ENST00000561662 EYA3Q99504 573 aa23.87■■□□□ 1.41
COMMD4-204ENST00000561662 VIL1P09327 827 aaKnown RBP23.86■■□□□ 1.41
COMMD4-204ENST00000561662 RIPK4P57078 832 aa23.86■■□□□ 1.41
COMMD4-204ENST00000561662 ZNF296Q8WUU4 475 aaPredicted RBP23.86■■□□□ 1.41
COMMD4-204ENST00000561662 CHPF2Q9P2E5 772 aa23.86■■□□□ 1.41
COMMD4-204ENST00000561662 G3V3G9 751 aa23.85■■□□□ 1.41
COMMD4-204ENST00000561662 MKRN3Q13064 507 aaKnown RBP23.85■■□□□ 1.41
COMMD4-204ENST00000561662 SF3B3Q15393 1217 aaKnown RBP23.85■■□□□ 1.41
COMMD4-204ENST00000561662 DCAF8Q5TAQ9 597 aa23.85■■□□□ 1.41
COMMD4-204ENST00000561662 PRAMEF18Q5VWM3 479 aa23.85■■□□□ 1.41
COMMD4-204ENST00000561662 UBE2Q2LH0YL09 131 aa23.84■■□□□ 1.41
COMMD4-204ENST00000561662 UFL1O94874 794 aa23.84■■□□□ 1.41
COMMD4-204ENST00000561662 ZC3H12CQ9C0D7 883 aaKnown RBP23.84■■□□□ 1.41
COMMD4-204ENST00000561662 RPS8P62241 208 aaKnown RBP23.82■■□□□ 1.4
COMMD4-204ENST00000561662 SEC31BQ9NQW1 1179 aa23.82■■□□□ 1.4
COMMD4-204ENST00000561662 ANKIB1Q9P2G1 1089 aa23.82■■□□□ 1.4
COMMD4-204ENST00000561662 IRS4O14654 1257 aaPredicted RBP23.81■■□□□ 1.4
COMMD4-204ENST00000561662 RSBN1LQ6PCB5 846 aaPredicted RBP23.81■■□□□ 1.4
COMMD4-204ENST00000561662 PLBD2Q8NHP8 589 aa23.81■■□□□ 1.4
COMMD4-204ENST00000561662 ISCA1Q9BUE6 129 aa23.81■■□□□ 1.4
COMMD4-204ENST00000561662 LAS1LQ9Y4W2 734 aaKnown RBP23.81■■□□□ 1.4
COMMD4-204ENST00000561662 ZNF280AP59817 542 aaPredicted RBP23.8■■□□□ 1.4
COMMD4-204ENST00000561662 TTLL12Q14166 644 aaPredicted RBP23.8■■□□□ 1.4
COMMD4-204ENST00000561662 ANKRD13DQ6ZTN6 518 aa23.8■■□□□ 1.4
COMMD4-204ENST00000561662 NEUROD2Q15784 382 aa23.79■■□□□ 1.4
COMMD4-204ENST00000561662 REM2Q8IYK8 340 aaPredicted RBP23.79■■□□□ 1.4
COMMD4-204ENST00000561662 CCDC85AQ96PX6 553 aaPredicted RBP23.79■■□□□ 1.4
COMMD4-204ENST00000561662 PNNQ9H307 717 aaKnown RBP23.79■■□□□ 1.4
COMMD4-204ENST00000561662 MYOZ2Q9NPC6 264 aa23.79■■□□□ 1.4
COMMD4-204ENST00000561662 GGA1Q9UJY5 639 aa23.79■■□□□ 1.4
COMMD4-204ENST00000561662 PAPPA2Q9BXP8 1791 aa23.78■■□□□ 1.4
COMMD4-204ENST00000561662 MKI67P46013 3256 aaKnown RBP23.78■■□□□ 1.4
COMMD4-204ENST00000561662 PKN2Q16513 984 aaKnown RBP23.78■■□□□ 1.4
COMMD4-204ENST00000561662 USP17L8P0C7I0 530 aa23.77■■□□□ 1.4
COMMD4-204ENST00000561662 FKBP1BP68106 108 aa23.77■■□□□ 1.4
COMMD4-204ENST00000561662 HDGFL1Q5TGJ6 251 aa23.77■■□□□ 1.4
COMMD4-204ENST00000561662 AGBL3Q8NEM8 1001 aa23.77■■□□□ 1.4
COMMD4-204ENST00000561662 R3HDMLQ9H3Y0 253 aa23.77■■□□□ 1.4
COMMD4-204ENST00000561662 GPR25O00155 361 aa23.76■■□□□ 1.39
COMMD4-204ENST00000561662 TMPOP42166 694 aaKnown RBP23.76■■□□□ 1.39
COMMD4-204ENST00000561662 JARID2Q92833 1246 aaPredicted RBP23.76■■□□□ 1.39
COMMD4-204ENST00000561662 BABAM1Q9NWV8 329 aa23.76■■□□□ 1.39
COMMD4-204ENST00000561662 PODXL2Q9NZ53 605 aa23.76■■□□□ 1.39
COMMD4-204ENST00000561662 NBPF9Q3BBW0 867 aa23.75■■□□□ 1.39
COMMD4-204ENST00000561662 GMLQ99445 158 aa23.75■■□□□ 1.39
COMMD4-204ENST00000561662 MXD3Q9BW11 206 aa23.75■■□□□ 1.39
COMMD4-204ENST00000561662 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.75■■□□□ 1.39
COMMD4-204ENST00000561662 WTIPA6NIX2 430 aaPredicted RBP23.74■■□□□ 1.39
COMMD4-204ENST00000561662 PRKG1Q13976 671 aa23.74■■□□□ 1.39
COMMD4-204ENST00000561662 FBXO46Q6PJ61 603 aaPredicted RBP23.73■■□□□ 1.39
COMMD4-204ENST00000561662 CCDC146Q8IYE0 955 aa23.73■■□□□ 1.39
COMMD4-204ENST00000561662 FBXW7Q969H0 707 aa23.72■■□□□ 1.39
COMMD4-204ENST00000561662 PITPNM2Q9BZ72 1349 aa23.72■■□□□ 1.39
COMMD4-204ENST00000561662 USP17L3A6NCW0 530 aa23.71■■□□□ 1.39
COMMD4-204ENST00000561662 USP17L4A6NCW7 530 aa23.71■■□□□ 1.39
COMMD4-204ENST00000561662 CHL1O00533 1208 aa23.71■■□□□ 1.39
COMMD4-204ENST00000561662 TM4SF4P48230 202 aa23.71■■□□□ 1.39
COMMD4-204ENST00000561662 LMOD3Q0VAK6 560 aa23.71■■□□□ 1.39
COMMD4-204ENST00000561662 USP17L1Q7RTZ2 530 aa23.71■■□□□ 1.39
COMMD4-204ENST00000561662 DBF4Q9UBU7 674 aaPredicted RBP23.71■■□□□ 1.39
COMMD4-204ENST00000561662 FKTNO75072 461 aa23.7■■□□□ 1.38
COMMD4-204ENST00000561662 PTPN12Q05209 780 aaKnown RBP23.7■■□□□ 1.38
COMMD4-204ENST00000561662 HTTP42858 3142 aa23.69■■□□□ 1.38
COMMD4-204ENST00000561662 ZBTB38Q8NAP3 1195 aaPredicted RBP23.69■■□□□ 1.38
COMMD4-204ENST00000561662 FZD1Q9UP38 647 aa23.69■■□□□ 1.38
COMMD4-204ENST00000561662 CENPFP49454 3210 aa23.69■■□□□ 1.38
COMMD4-204ENST00000561662 ZNF609O15014 1411 aa23.68■■□□□ 1.38
COMMD4-204ENST00000561662 SASH1O94885 1247 aa23.68■■□□□ 1.38
COMMD4-204ENST00000561662 HABP4Q5JVS0 413 aaKnown RBP23.68■■□□□ 1.38
COMMD4-204ENST00000561662 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
COMMD4-204ENST00000561662 MYD88Q99836 296 aa23.68■■□□□ 1.38
COMMD4-204ENST00000561662 XDHP47989 1333 aa23.67■■□□□ 1.38
COMMD4-204ENST00000561662 POTEFA5A3E0 1075 aa23.67■■□□□ 1.38
COMMD4-204ENST00000561662 DDX10Q13206 875 aaKnown RBP23.67■■□□□ 1.38
COMMD4-204ENST00000561662 TRIM28Q13263 835 aaKnown RBP23.67■■□□□ 1.38
COMMD4-204ENST00000561662 CCDC152Q4G0S7 254 aa23.67■■□□□ 1.38
COMMD4-204ENST00000561662 HYPKQ9NX55 129 aa23.67■■□□□ 1.38
COMMD4-204ENST00000561662 PSME4Q14997 1843 aa23.66■■□□□ 1.38
COMMD4-204ENST00000561662 SREBF2Q12772 1141 aa23.66■■□□□ 1.38
COMMD4-204ENST00000561662 DUSP27Q5VZP5 1158 aa23.66■■□□□ 1.38
COMMD4-204ENST00000561662 GCC1Q96CN9 775 aa23.66■■□□□ 1.38
COMMD4-204ENST00000561662 PHAXQ9H814 394 aaKnown RBP23.66■■□□□ 1.38
COMMD4-204ENST00000561662 WNT10BO00744 389 aa23.65■■□□□ 1.38
COMMD4-204ENST00000561662 NF2P35240 595 aa23.65■■□□□ 1.38
COMMD4-204ENST00000561662 PODNQ7Z5L7 613 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms