RNA–Protein interactions for RNA: ENST00000560356.5

CPNE6-215, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-215ENST00000560356 DOK7Q18PE1 504 aa19.8■□□□□ 0.76
CPNE6-215ENST00000560356 CELF1Q92879 486 aaKnown RBP19.8■□□□□ 0.76
CPNE6-215ENST00000560356 EYA3Q99504 573 aa19.8■□□□□ 0.76
CPNE6-215ENST00000560356 MAPK8IP3Q9UPT6 1336 aa19.79■□□□□ 0.76
CPNE6-215ENST00000560356 GPSM2P81274 684 aa19.79■□□□□ 0.76
CPNE6-215ENST00000560356 NECTIN2Q92692 538 aa19.79■□□□□ 0.76
CPNE6-215ENST00000560356 PKN2Q16513 984 aaKnown RBP19.78■□□□□ 0.76
CPNE6-215ENST00000560356 HDAC9Q9UKV0 1011 aa19.78■□□□□ 0.76
CPNE6-215ENST00000560356 ANGEL2Q5VTE6 544 aaKnown RBP19.77■□□□□ 0.76
CPNE6-215ENST00000560356 ZNF609O15014 1411 aa19.76■□□□□ 0.75
CPNE6-215ENST00000560356 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
CPNE6-215ENST00000560356 TBC1D16Q8TBP0 767 aa19.76■□□□□ 0.75
CPNE6-215ENST00000560356 ZNF296Q8WUU4 475 aaPredicted RBP19.76■□□□□ 0.75
CPNE6-215ENST00000560356 VIL1P09327 827 aaKnown RBP19.75■□□□□ 0.75
CPNE6-215ENST00000560356 FKBP1BP68106 108 aa19.75■□□□□ 0.75
CPNE6-215ENST00000560356 SF3B3Q15393 1217 aaKnown RBP19.75■□□□□ 0.75
CPNE6-215ENST00000560356 TBC1D8O95759 1140 aa19.74■□□□□ 0.75
CPNE6-215ENST00000560356 SCARF1Q14162 830 aa19.74■□□□□ 0.75
CPNE6-215ENST00000560356 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
CPNE6-215ENST00000560356 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
CPNE6-215ENST00000560356 ZNF280AP59817 542 aaPredicted RBP19.73■□□□□ 0.75
CPNE6-215ENST00000560356 ZC3H12CQ9C0D7 883 aaKnown RBP19.73■□□□□ 0.75
CPNE6-215ENST00000560356 ZNF646O15015 1829 aaPredicted RBP19.73■□□□□ 0.75
CPNE6-215ENST00000560356 G3V3G9 751 aa19.72■□□□□ 0.75
CPNE6-215ENST00000560356 DCAF8Q5TAQ9 597 aa19.72■□□□□ 0.75
CPNE6-215ENST00000560356 MOB2Q70IA6 237 aa19.72■□□□□ 0.75
CPNE6-215ENST00000560356 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
CPNE6-215ENST00000560356 BABAM1Q9NWV8 329 aa19.72■□□□□ 0.75
CPNE6-215ENST00000560356 PITPNM2Q9BZ72 1349 aa19.72■□□□□ 0.75
CPNE6-215ENST00000560356 SPEF2Q9C093 1822 aa19.72■□□□□ 0.75
CPNE6-215ENST00000560356 RBBP6Q7Z6E9 1792 aaKnown RBP19.71■□□□□ 0.75
CPNE6-215ENST00000560356 UFL1O94874 794 aa19.71■□□□□ 0.75
CPNE6-215ENST00000560356 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
CPNE6-215ENST00000560356 RSBN1LQ6PCB5 846 aaPredicted RBP19.71■□□□□ 0.75
CPNE6-215ENST00000560356 AGBL3Q8NEM8 1001 aa19.71■□□□□ 0.75
CPNE6-215ENST00000560356 ISCA1Q9BUE6 129 aa19.71■□□□□ 0.75
CPNE6-215ENST00000560356 CHPF2Q9P2E5 772 aa19.71■□□□□ 0.75
CPNE6-215ENST00000560356 ATP5J2-PTCD1G3V325 749 aa19.7■□□□□ 0.74
CPNE6-215ENST00000560356 FBXO46Q6PJ61 603 aaPredicted RBP19.7■□□□□ 0.74
CPNE6-215ENST00000560356 PLBD2Q8NHP8 589 aa19.7■□□□□ 0.74
CPNE6-215ENST00000560356 PODXL2Q9NZ53 605 aa19.7■□□□□ 0.74
CPNE6-215ENST00000560356 SCAF8Q9UPN6 1271 aaKnown RBP19.7■□□□□ 0.74
CPNE6-215ENST00000560356 UBE2Q2LH0YL09 131 aa19.69■□□□□ 0.74
CPNE6-215ENST00000560356 GPR25O00155 361 aa19.69■□□□□ 0.74
CPNE6-215ENST00000560356 RIPK4P57078 832 aa19.69■□□□□ 0.74
CPNE6-215ENST00000560356 RPS8P62241 208 aaKnown RBP19.69■□□□□ 0.74
CPNE6-215ENST00000560356 KRT24Q2M2I5 525 aa19.69■□□□□ 0.74
CPNE6-215ENST00000560356 MYOZ2Q9NPC6 264 aa19.69■□□□□ 0.74
CPNE6-215ENST00000560356 HTTP42858 3142 aa19.68■□□□□ 0.74
CPNE6-215ENST00000560356 IRS4O14654 1257 aaPredicted RBP19.68■□□□□ 0.74
CPNE6-215ENST00000560356 NOM1Q5C9Z4 860 aaKnown RBP19.68■□□□□ 0.74
CPNE6-215ENST00000560356 ANKIB1Q9P2G1 1089 aa19.68■□□□□ 0.74
CPNE6-215ENST00000560356 GGA1Q9UJY5 639 aa19.68■□□□□ 0.74
CPNE6-215ENST00000560356 MKI67P46013 3256 aaKnown RBP19.68■□□□□ 0.74
CPNE6-215ENST00000560356 USP17L8P0C7I0 530 aa19.67■□□□□ 0.74
CPNE6-215ENST00000560356 TTLL12Q14166 644 aaPredicted RBP19.67■□□□□ 0.74
CPNE6-215ENST00000560356 ANKRD13DQ6ZTN6 518 aa19.67■□□□□ 0.74
CPNE6-215ENST00000560356 LAMB1P07942 1786 aa19.67■□□□□ 0.74
CPNE6-215ENST00000560356 TM4SF4P48230 202 aa19.66■□□□□ 0.74
CPNE6-215ENST00000560356 LMOD3Q0VAK6 560 aa19.66■□□□□ 0.74
CPNE6-215ENST00000560356 MKRN3Q13064 507 aaKnown RBP19.66■□□□□ 0.74
CPNE6-215ENST00000560356 PRAMEF18Q5VWM3 479 aa19.66■□□□□ 0.74
CPNE6-215ENST00000560356 GMLQ99445 158 aa19.66■□□□□ 0.74
CPNE6-215ENST00000560356 SEC31BQ9NQW1 1179 aa19.66■□□□□ 0.74
CPNE6-215ENST00000560356 HDGFL1Q5TGJ6 251 aa19.65■□□□□ 0.74
CPNE6-215ENST00000560356 MYH3P11055 1940 aa19.64■□□□□ 0.74
CPNE6-215ENST00000560356 FKTNO75072 461 aa19.64■□□□□ 0.73
CPNE6-215ENST00000560356 SREBF2Q12772 1141 aa19.64■□□□□ 0.73
CPNE6-215ENST00000560356 CENPFP49454 3210 aa19.63■□□□□ 0.73
CPNE6-215ENST00000560356 HABP4Q5JVS0 413 aaKnown RBP19.63■□□□□ 0.73
CPNE6-215ENST00000560356 XDHP47989 1333 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 USP17L3A6NCW0 530 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 USP17L4A6NCW7 530 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 NF2P35240 595 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
CPNE6-215ENST00000560356 NBPF9Q3BBW0 867 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 USP17L1Q7RTZ2 530 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 CFHR5Q9BXR6 569 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
CPNE6-215ENST00000560356 DBF4Q9UBU7 674 aaPredicted RBP19.62■□□□□ 0.73
CPNE6-215ENST00000560356 ECM29Q5VYK3 1845 aa19.61■□□□□ 0.73
CPNE6-215ENST00000560356 TRIM28Q13263 835 aaKnown RBP19.61■□□□□ 0.73
CPNE6-215ENST00000560356 RALBP1Q15311 655 aa19.61■□□□□ 0.73
CPNE6-215ENST00000560356 CCDC152Q4G0S7 254 aa19.6■□□□□ 0.73
CPNE6-215ENST00000560356 PODNQ7Z5L7 613 aa19.6■□□□□ 0.73
CPNE6-215ENST00000560356 ZBTB38Q8NAP3 1195 aaPredicted RBP19.6■□□□□ 0.73
CPNE6-215ENST00000560356 LAS1LQ9Y4W2 734 aaKnown RBP19.6■□□□□ 0.73
CPNE6-215ENST00000560356 BRCA2P51587 3418 aa19.6■□□□□ 0.73
CPNE6-215ENST00000560356 KIAA0100Q14667 2235 aaKnown RBP19.59■□□□□ 0.73
CPNE6-215ENST00000560356 CHL1O00533 1208 aa19.59■□□□□ 0.73
CPNE6-215ENST00000560356 HOXB7P09629 217 aa19.59■□□□□ 0.73
CPNE6-215ENST00000560356 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
CPNE6-215ENST00000560356 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
CPNE6-215ENST00000560356 HYPKQ9NX55 129 aa19.59■□□□□ 0.73
CPNE6-215ENST00000560356 WNT10BO00744 389 aa19.58■□□□□ 0.72
CPNE6-215ENST00000560356 HSP90B1P14625 803 aaKnown RBP19.58■□□□□ 0.72
CPNE6-215ENST00000560356 ATP2B4P23634 1241 aa19.58■□□□□ 0.72
CPNE6-215ENST00000560356 PTPN12Q05209 780 aaKnown RBP19.58■□□□□ 0.72
CPNE6-215ENST00000560356 PRKG1Q13976 671 aa19.58■□□□□ 0.72
CPNE6-215ENST00000560356 TRIM17Q9Y577 477 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms