RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CHADLQ6NUI6 762 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 MPHOSPH8Q99549 860 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 ZC3H12CQ9C0D7 883 aaKnown RBP10.37□□□□□ -0.75
SNX1-207ENST00000559401 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 RTL9Q8NET4 1388 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 PTPRCP08575 1304 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 XDHP47989 1333 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 ANKRD18BA2A2Z9 1011 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 GRM8O00222 908 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 ECE2O60344 883 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 ALDH1L1O75891 902 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 CASP7P55210 303 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 HTRA3P83110 453 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 TNIP1Q15025 636 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 TAF7LQ5H9L4 462 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 PNMA8AQ86V59 439 aaPredicted RBP10.36□□□□□ -0.75
SNX1-207ENST00000559401 LDHDQ86WU2 507 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 PLA2G12BQ9BX93 195 aa10.36□□□□□ -0.75
SNX1-207ENST00000559401 EPS15P42566 896 aa10.35□□□□□ -0.75
SNX1-207ENST00000559401 GMPSP49915 693 aaPredicted RBP10.35□□□□□ -0.75
SNX1-207ENST00000559401 SCNN1DP51172 638 aa10.35□□□□□ -0.75
SNX1-207ENST00000559401 IFIT5Q13325 482 aaKnown RBP10.35□□□□□ -0.75
SNX1-207ENST00000559401 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
SNX1-207ENST00000559401 BSDC1Q9NW68 430 aaPredicted RBP10.35□□□□□ -0.75
SNX1-207ENST00000559401 PODXL2Q9NZ53 605 aa10.35□□□□□ -0.75
SNX1-207ENST00000559401 ADAMTSL1Q8N6G6 1762 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 YDJCA8MPS7 323 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 CSF1RP07333 972 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 CT47B1P0C2W7 299 aaPredicted RBP10.34□□□□□ -0.75
SNX1-207ENST00000559401 ATP2B4P23634 1241 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 KCNJ4P48050 445 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 CCDC57Q2TAC2 916 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 LMBR1LQ6UX01 489 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 TRMT2AQ8IZ69 625 aaKnown RBP10.34□□□□□ -0.75
SNX1-207ENST00000559401 GPRC5DQ9NZD1 345 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 MINPP1Q9UNW1 487 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 A0A1B0GUL6 1792 aa10.34□□□□□ -0.75
SNX1-207ENST00000559401 PSMD14O00487 310 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 CCT4P50991 539 aaKnown RBP10.33□□□□□ -0.76
SNX1-207ENST00000559401 FOXO4P98177 505 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 EPHA10Q5JZY3 1008 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 MAP1SQ66K74 1059 aaPredicted RBP10.33□□□□□ -0.76
SNX1-207ENST00000559401 FBXW7Q969H0 707 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 SUCLG2Q96I99 432 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 ANKRD2Q9GZV1 360 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 ADARB2Q9NS39 739 aaKnown RBP10.33□□□□□ -0.76
SNX1-207ENST00000559401 ZBTB12Q9Y330 459 aaPredicted RBP10.33□□□□□ -0.76
SNX1-207ENST00000559401 SCN9AQ15858 1988 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 PSME4Q14997 1843 aa10.33□□□□□ -0.76
SNX1-207ENST00000559401 MED23Q9ULK4 1368 aa10.32□□□□□ -0.76
SNX1-207ENST00000559401 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
SNX1-207ENST00000559401 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
SNX1-207ENST00000559401 MICALL2Q8IY33 904 aa10.32□□□□□ -0.76
SNX1-207ENST00000559401 CNNM1Q9NRU3 951 aa10.32□□□□□ -0.76
SNX1-207ENST00000559401 NOB1Q9ULX3 412 aaKnown RBP10.32□□□□□ -0.76
SNX1-207ENST00000559401 WTIPA6NIX2 430 aaPredicted RBP10.31□□□□□ -0.76
SNX1-207ENST00000559401 H7C1D1 291 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 PLIN1O60240 522 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 CHRNDQ07001 517 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 CNTROBQ8N137 903 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 HELBQ8NG08 1087 aaPredicted RBP10.31□□□□□ -0.76
SNX1-207ENST00000559401 ZNF594Q96JF6 807 aaPredicted RBP10.31□□□□□ -0.76
SNX1-207ENST00000559401 API5Q9BZZ5 524 aaKnown RBP10.31□□□□□ -0.76
SNX1-207ENST00000559401 KCNQ5Q9NR82 932 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 CNOT7Q9UIV1 285 aaKnown RBP10.31□□□□□ -0.76
SNX1-207ENST00000559401 LEMD3Q9Y2U8 911 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 ZNF804BA4D1E1 1349 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 KIF16BQ96L93 1317 aa10.31□□□□□ -0.76
SNX1-207ENST00000559401 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
SNX1-207ENST00000559401 TAF5LO75529 589 aa10.3□□□□□ -0.76
SNX1-207ENST00000559401 RARSP54136 660 aaKnown RBP10.3□□□□□ -0.76
SNX1-207ENST00000559401 TBC1D10BQ4KMP7 808 aaPredicted RBP10.3□□□□□ -0.76
SNX1-207ENST00000559401 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
SNX1-207ENST00000559401 FRAT1Q92837 279 aaPredicted RBP10.3□□□□□ -0.76
SNX1-207ENST00000559401 BICC1Q9H694 974 aaKnown RBP10.3□□□□□ -0.76
SNX1-207ENST00000559401 RPS12P25398 132 aaKnown RBP10.29□□□□□ -0.76
SNX1-207ENST00000559401 KLRK1P26718 216 aa10.29□□□□□ -0.76
SNX1-207ENST00000559401 RBM26Q5T8P6 1007 aaKnown RBP10.29□□□□□ -0.76
SNX1-207ENST00000559401 PODNQ7Z5L7 613 aa10.29□□□□□ -0.76
SNX1-207ENST00000559401 TRPM4Q8TD43 1214 aa10.29□□□□□ -0.76
SNX1-207ENST00000559401 TRPM7Q96QT4 1865 aa10.29□□□□□ -0.76
SNX1-207ENST00000559401 UTYO14607 1347 aa10.29□□□□□ -0.76
SNX1-207ENST00000559401 PASKQ96RG2 1323 aa10.29□□□□□ -0.76
SNX1-207ENST00000559401 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 SNAP23O00161 211 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
SNX1-207ENST00000559401 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
SNX1-207ENST00000559401 RSBN1LQ6PCB5 846 aaPredicted RBP10.28□□□□□ -0.76
SNX1-207ENST00000559401 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 SAMD7Q7Z3H4 446 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 TXNRD3Q86VQ6 643 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 DPF2Q92785 391 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 KLRG1Q96E93 195 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 KAZALD1Q96I82 304 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 COA1Q9GZY4 146 aa10.28□□□□□ -0.76
SNX1-207ENST00000559401 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms