RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 EPHX2P34913 555 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 CXCL9Q07325 125 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.18
SPG11-216ENST00000559347 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
SPG11-216ENST00000559347 XDHP47989 1333 aa13.9□□□□□ -0.19
SPG11-216ENST00000559347 C6orf229H3BNL8 230 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 GRM8O00222 908 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 ALDH1L1O75891 902 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 UFL1O94874 794 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 CSF1RP07333 972 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 CT47B1P0C2W7 299 aaPredicted RBP13.89□□□□□ -0.19
SPG11-216ENST00000559347 EYA3Q99504 573 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 SRCIN1Q9C0H9 1055 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
SPG11-216ENST00000559347 ITGA6P23229 1130 aa13.88□□□□□ -0.19
SPG11-216ENST00000559347 LMOD1P29536 600 aaPredicted RBP13.88□□□□□ -0.19
SPG11-216ENST00000559347 FOXO4P98177 505 aa13.88□□□□□ -0.19
SPG11-216ENST00000559347 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
SPG11-216ENST00000559347 CIAPIN1Q6FI81 312 aa13.88□□□□□ -0.19
SPG11-216ENST00000559347 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
SPG11-216ENST00000559347 SMC4Q9NTJ3 1288 aa13.88□□□□□ -0.19
SPG11-216ENST00000559347 BSDC1Q9NW68 430 aaPredicted RBP13.88□□□□□ -0.19
SPG11-216ENST00000559347 GGA1Q9UJY5 639 aa13.88□□□□□ -0.19
SPG11-216ENST00000559347 MED23Q9ULK4 1368 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 RIMBP2O15034 1052 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 ECE2O60344 883 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 RAD17O75943 681 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 EPS15P42566 896 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 PNMA8AQ86V59 439 aaPredicted RBP13.87□□□□□ -0.19
SPG11-216ENST00000559347 GPRC5DQ9NZD1 345 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 ZNF609O15014 1411 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 UTYO14607 1347 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 ARAP2Q8WZ64 1704 aa13.87□□□□□ -0.19
SPG11-216ENST00000559347 IGHMBP2P38935 993 aaKnown RBP13.86□□□□□ -0.19
SPG11-216ENST00000559347 GMPSP49915 693 aaPredicted RBP13.86□□□□□ -0.19
SPG11-216ENST00000559347 HTRA3P83110 453 aa13.86□□□□□ -0.19
SPG11-216ENST00000559347 TNIP1Q15025 636 aa13.86□□□□□ -0.19
SPG11-216ENST00000559347 EPHA10Q5JZY3 1008 aa13.86□□□□□ -0.19
SPG11-216ENST00000559347 C9orf78Q9NZ63 289 aaPredicted RBP13.86□□□□□ -0.19
SPG11-216ENST00000559347 PASKQ96RG2 1323 aa13.86□□□□□ -0.19
SPG11-216ENST00000559347 ATP2B4P23634 1241 aa13.85□□□□□ -0.19
SPG11-216ENST00000559347 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
SPG11-216ENST00000559347 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
SPG11-216ENST00000559347 ANKRD18BA2A2Z9 1011 aa13.84□□□□□ -0.19
SPG11-216ENST00000559347 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
SPG11-216ENST00000559347 PSMD14O00487 310 aa13.84□□□□□ -0.19
SPG11-216ENST00000559347 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
SPG11-216ENST00000559347 CCT4P50991 539 aaKnown RBP13.84□□□□□ -0.19
SPG11-216ENST00000559347 LMBR1LQ6UX01 489 aa13.84□□□□□ -0.19
SPG11-216ENST00000559347 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
SPG11-216ENST00000559347 KAZALD1Q96I82 304 aa13.84□□□□□ -0.19
SPG11-216ENST00000559347 SUCLG2Q96I99 432 aa13.84□□□□□ -0.19
SPG11-216ENST00000559347 MPHOSPH8Q99549 860 aa13.84□□□□□ -0.19
SPG11-216ENST00000559347 ADARB2Q9NS39 739 aaKnown RBP13.84□□□□□ -0.19
SPG11-216ENST00000559347 CHMP3Q9Y3E7 222 aa13.84□□□□□ -0.19
SPG11-216ENST00000559347 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.2
SPG11-216ENST00000559347 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.2
SPG11-216ENST00000559347 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.2
SPG11-216ENST00000559347 DNAJC5GQ8N7S2 189 aa13.83□□□□□ -0.2
SPG11-216ENST00000559347 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
SPG11-216ENST00000559347 ECM29Q5VYK3 1845 aa13.83□□□□□ -0.2
SPG11-216ENST00000559347 MYH13Q9UKX3 1938 aa13.82□□□□□ -0.2
SPG11-216ENST00000559347 ITGBL1O95965 494 aaPredicted RBP13.82□□□□□ -0.2
SPG11-216ENST00000559347 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
SPG11-216ENST00000559347 CHRNDQ07001 517 aa13.82□□□□□ -0.2
SPG11-216ENST00000559347 MAP1SQ66K74 1059 aaPredicted RBP13.82□□□□□ -0.2
SPG11-216ENST00000559347 KCNQ5Q9NR82 932 aa13.82□□□□□ -0.2
SPG11-216ENST00000559347 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
SPG11-216ENST00000559347 KIF16BQ96L93 1317 aa13.82□□□□□ -0.2
SPG11-216ENST00000559347 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
SPG11-216ENST00000559347 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 RPS12P25398 132 aaKnown RBP13.81□□□□□ -0.2
SPG11-216ENST00000559347 CCDC57Q2TAC2 916 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 RABL6Q3YEC7 729 aaPredicted RBP13.81□□□□□ -0.2
SPG11-216ENST00000559347 MICALL2Q8IY33 904 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 DPF2Q92785 391 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 KLRG1Q96E93 195 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 ANKRD2Q9GZV1 360 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 BICC1Q9H694 974 aaKnown RBP13.81□□□□□ -0.2
SPG11-216ENST00000559347 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 THSD7BQ9C0I4 1608 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 ZNF804BA4D1E1 1349 aa13.81□□□□□ -0.2
SPG11-216ENST00000559347 G3V3G9 751 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 KLRK1P26718 216 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 DCAF8Q5TAQ9 597 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 ANKRD44Q8N8A2 993 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
SPG11-216ENST00000559347 USP44Q9H0E7 712 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
SPG11-216ENST00000559347 CNOT7Q9UIV1 285 aaKnown RBP13.8□□□□□ -0.2
SPG11-216ENST00000559347 NOB1Q9ULX3 412 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms