RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 IGHMBP2P38935 993 aaKnown RBP23.54■■□□□ 1.36
CASC4-209ENST00000559222 IFIT5Q13325 482 aaKnown RBP23.54■■□□□ 1.36
CASC4-209ENST00000559222 CEP350Q5VT06 3117 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 SCN9AQ15858 1988 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 GLTPD2A6NH11 291 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 C6orf229H3BNL8 230 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 PLIN1O60240 522 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 UFL1O94874 794 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 UBTFL1P0CB47 393 aaPredicted RBP23.53■■□□□ 1.36
CASC4-209ENST00000559222 PODXL2Q9NZ53 605 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 ANKIB1Q9P2G1 1089 aa23.53■■□□□ 1.36
CASC4-209ENST00000559222 LRRFIP2Q9Y608 721 aaKnown RBP23.53■■□□□ 1.36
CASC4-209ENST00000559222 FZD9O00144 591 aa23.52■■□□□ 1.36
CASC4-209ENST00000559222 RIMBP2O15034 1052 aa23.52■■□□□ 1.36
CASC4-209ENST00000559222 DDNO94850 711 aaPredicted RBP23.52■■□□□ 1.36
CASC4-209ENST00000559222 C1QTNF8P60827 252 aa23.52■■□□□ 1.36
CASC4-209ENST00000559222 KIAA2012Q0VF49 1180 aa23.52■■□□□ 1.36
CASC4-209ENST00000559222 SUPT20HQ8NEM7 779 aa23.52■■□□□ 1.36
CASC4-209ENST00000559222 KLHDC4Q8TBB5 520 aa23.52■■□□□ 1.36
CASC4-209ENST00000559222 PUS3Q9BZE2 481 aaKnown RBP23.52■■□□□ 1.36
CASC4-209ENST00000559222 SNAP23O00161 211 aa23.51■■□□□ 1.35
CASC4-209ENST00000559222 KIF3CO14782 793 aa23.51■■□□□ 1.35
CASC4-209ENST00000559222 CCDC57Q2TAC2 916 aa23.51■■□□□ 1.35
CASC4-209ENST00000559222 PANK1Q8TE04 598 aa23.51■■□□□ 1.35
CASC4-209ENST00000559222 XDHP47989 1333 aa23.51■■□□□ 1.35
CASC4-209ENST00000559222 ZNF646O15015 1829 aaPredicted RBP23.5■■□□□ 1.35
CASC4-209ENST00000559222 NIM1KQ8IY84 436 aa23.5■■□□□ 1.35
CASC4-209ENST00000559222 DZIP1LQ8IYY4 767 aaKnown RBP23.5■■□□□ 1.35
CASC4-209ENST00000559222 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
CASC4-209ENST00000559222 MPHOSPH8Q99549 860 aa23.5■■□□□ 1.35
CASC4-209ENST00000559222 GGA1Q9UJY5 639 aa23.5■■□□□ 1.35
CASC4-209ENST00000559222 YDJCA8MPS7 323 aa23.49■■□□□ 1.35
CASC4-209ENST00000559222 POTECB2RU33 542 aa23.49■■□□□ 1.35
CASC4-209ENST00000559222 KLRK1P26718 216 aa23.49■■□□□ 1.35
CASC4-209ENST00000559222 CHRNDQ07001 517 aa23.49■■□□□ 1.35
CASC4-209ENST00000559222 JDP2Q8WYK2 163 aa23.49■■□□□ 1.35
CASC4-209ENST00000559222 RRAGCQ9HB90 399 aa23.49■■□□□ 1.35
CASC4-209ENST00000559222 TAF5LO75529 589 aa23.48■■□□□ 1.35
CASC4-209ENST00000559222 RFX5P48382 616 aaPredicted RBP23.48■■□□□ 1.35
CASC4-209ENST00000559222 DOK7Q18PE1 504 aa23.48■■□□□ 1.35
CASC4-209ENST00000559222 WASHC4Q2M389 1173 aa23.48■■□□□ 1.35
CASC4-209ENST00000559222 TAF7LQ5H9L4 462 aa23.48■■□□□ 1.35
CASC4-209ENST00000559222 FTSJ3Q8IY81 847 aaKnown RBP23.48■■□□□ 1.35
CASC4-209ENST00000559222 DBNDD1Q9H9R9 158 aa23.48■■□□□ 1.35
CASC4-209ENST00000559222 KDM2BQ8NHM5 1336 aa23.48■■□□□ 1.35
CASC4-209ENST00000559222 PSME4Q14997 1843 aa23.47■■□□□ 1.35
CASC4-209ENST00000559222 IFFO2Q5TF58 517 aa23.47■■□□□ 1.35
CASC4-209ENST00000559222 LRRC24Q50LG9 513 aa23.46■■□□□ 1.35
CASC4-209ENST00000559222 LDHAL6AQ6ZMR3 332 aa23.46■■□□□ 1.35
CASC4-209ENST00000559222 TXNRD3Q86VQ6 643 aa23.46■■□□□ 1.35
CASC4-209ENST00000559222 ITPRIPQ8IWB1 547 aa23.46■■□□□ 1.35
CASC4-209ENST00000559222 VPS33BQ9H267 617 aa23.46■■□□□ 1.35
CASC4-209ENST00000559222 KCNQ5Q9NR82 932 aa23.46■■□□□ 1.35
CASC4-209ENST00000559222 ATP2B4P23634 1241 aa23.45■■□□□ 1.34
CASC4-209ENST00000559222 C20orf194Q5TEA3 1177 aa23.45■■□□□ 1.34
CASC4-209ENST00000559222 CNNM1Q9NRU3 951 aa23.45■■□□□ 1.34
CASC4-209ENST00000559222 ZNRF3Q9ULT6 936 aa23.45■■□□□ 1.34
CASC4-209ENST00000559222 IRS2Q9Y4H2 1338 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 ECE2O60344 883 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 RAD17O75943 681 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 GNAI3P08754 354 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 CXCL9Q07325 125 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 DPY19L2Q6NUT2 758 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 EYA3Q99504 573 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 C1orf115Q9H7X2 142 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 GJA3Q9Y6H8 435 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 SCN4AP35499 1836 aa23.44■■□□□ 1.34
CASC4-209ENST00000559222 EIF6P56537 245 aaKnown RBP23.43■■□□□ 1.34
CASC4-209ENST00000559222 RIPOR2Q9Y4F9 1068 aa23.43■■□□□ 1.34
CASC4-209ENST00000559222 MED23Q9ULK4 1368 aa23.42■■□□□ 1.34
CASC4-209ENST00000559222 ZNF804BA4D1E1 1349 aa23.42■■□□□ 1.34
CASC4-209ENST00000559222 PTPN12Q05209 780 aaKnown RBP23.42■■□□□ 1.34
CASC4-209ENST00000559222 ZC3H12CQ9C0D7 883 aaKnown RBP23.42■■□□□ 1.34
CASC4-209ENST00000559222 ANKRD2Q9GZV1 360 aa23.42■■□□□ 1.34
CASC4-209ENST00000559222 PA2G4Q9UQ80 394 aaKnown RBP23.42■■□□□ 1.34
CASC4-209ENST00000559222 L3MBTL3Q96JM7 780 aaPredicted RBP23.41■■□□□ 1.34
CASC4-209ENST00000559222 ZBTB7BO15156 539 aaPredicted RBP23.4■■□□□ 1.34
CASC4-209ENST00000559222 GPC2Q8N158 579 aa23.4■■□□□ 1.34
CASC4-209ENST00000559222 SIL1Q9H173 461 aa23.4■■□□□ 1.34
CASC4-209ENST00000559222 LEMD3Q9Y2U8 911 aa23.4■■□□□ 1.34
CASC4-209ENST00000559222 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
CASC4-209ENST00000559222 PNMA6EA0A0J9YXQ4 647 aa23.39■■□□□ 1.33
CASC4-209ENST00000559222 GNAI2P04899 355 aa23.39■■□□□ 1.33
CASC4-209ENST00000559222 ADAMTSL1Q8N6G6 1762 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 SHTN1A0MZ66 631 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 PSMD14O00487 310 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 POTEIP0CG38 1075 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 POTEJP0CG39 1038 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 SCNN1DP51172 638 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 CIAPIN1Q6FI81 312 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 ATG9AQ7Z3C6 839 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 VGLL2Q8N8G2 317 aa23.38■■□□□ 1.33
CASC4-209ENST00000559222 VEGFAP15692 232 aaPredicted RBP23.37■■□□□ 1.33
CASC4-209ENST00000559222 KCNJ4P48050 445 aa23.37■■□□□ 1.33
CASC4-209ENST00000559222 MTX1Q13505 466 aa23.37■■□□□ 1.33
CASC4-209ENST00000559222 ZBTB12Q9Y330 459 aaPredicted RBP23.37■■□□□ 1.33
CASC4-209ENST00000559222 EYA2O00167 538 aa23.36■■□□□ 1.33
CASC4-209ENST00000559222 SRGAP3O43295 1099 aa23.36■■□□□ 1.33
CASC4-209ENST00000559222 GMPSP49915 693 aaPredicted RBP23.36■■□□□ 1.33
CASC4-209ENST00000559222 MVPQ14764 893 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms