RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 DUOX1Q9NRD9 1551 aa11.22□□□□□ -0.61
SNRPA1-206ENST00000558059 LTBP1Q14766 1721 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 F6X3S4 739 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 CASP7P55210 303 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 CTSWP56202 376 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 GPSM2P81274 684 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 KIAA2012Q0VF49 1180 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 LINS1Q8NG48 757 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 TTLL11Q8NHH1 800 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 POLLQ9UGP5 575 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 GJA3Q9Y6H8 435 aa11.21□□□□□ -0.61
SNRPA1-206ENST00000558059 E9PSI1 815 aa11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 HTRA3P83110 453 aa11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 CXCL9Q07325 125 aa11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 CDCA7LQ96GN5 454 aa11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 PLA2G12BQ9BX93 195 aa11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 ZNRF3Q9ULT6 936 aa11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 NSFL1CQ9UNZ2 370 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-206ENST00000558059 PCNTO95613 3336 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 ADAMTSL1Q8N6G6 1762 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 EPHX2P34913 555 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 SCNN1DP51172 638 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 BEND3Q5T5X7 828 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 LDHDQ86WU2 507 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 TRMT2AQ8IZ69 625 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 GREM2Q9H772 168 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 SPEF2Q9C093 1822 aa11.19□□□□□ -0.62
SNRPA1-206ENST00000558059 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 EPS15P42566 896 aa11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 WASHC4Q2M389 1173 aa11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 ANKRD18AQ8IVF6 992 aa11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 MRPL50Q8N5N7 158 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 TBC1D16Q8TBP0 767 aa11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-206ENST00000558059 SCN9AQ15858 1988 aa11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 RAD17O75943 681 aa11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 CSF1RP07333 972 aa11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 CIAPIN1Q6FI81 312 aa11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 CDC5LQ99459 802 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-206ENST00000558059 UFL1O94874 794 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 ITGBL1O95965 494 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 FOXO4P98177 505 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 TNIP1Q15025 636 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 MIER1Q8N108 512 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 SSH1Q8WYL5 1049 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 EYA3Q99504 573 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 DBNDD1Q9H9R9 158 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 ANKIB1Q9P2G1 1089 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 MINPP1Q9UNW1 487 aa11.16□□□□□ -0.62
SNRPA1-206ENST00000558059 PASKQ96RG2 1323 aa11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 WTIPA6NIX2 430 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 ALDH1L1O75891 902 aa11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 ITGA6P23229 1130 aa11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 FAM161AQ3B820 660 aa11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 SLC4A10Q6U841 1118 aa11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 ZC3H12CQ9C0D7 883 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 KCNQ5Q9NR82 932 aa11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 POLR2AP24928 1970 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-206ENST00000558059 XDHP47989 1333 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 GRM8O00222 908 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 PSMD14O00487 310 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 ECE2O60344 883 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 ATP2B4P23634 1241 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 USP50Q70EL3 339 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 CNTROBQ8N137 903 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 KLRG1Q96E93 195 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 PSME4Q14997 1843 aa11.14□□□□□ -0.63
SNRPA1-206ENST00000558059 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
SNRPA1-206ENST00000558059 IGHMBP2P38935 993 aaKnown RBP11.13□□□□□ -0.63
SNRPA1-206ENST00000558059 ALDH1L2Q3SY69 923 aa11.13□□□□□ -0.63
SNRPA1-206ENST00000558059 BCL2L13Q9BXK5 485 aa11.13□□□□□ -0.63
SNRPA1-206ENST00000558059 CNOT7Q9UIV1 285 aaKnown RBP11.13□□□□□ -0.63
SNRPA1-206ENST00000558059 PTPRCP08575 1304 aa11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 VIL1P09327 827 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 CCT4P50991 539 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 HIRAP54198 1017 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms