RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CCDC194A0A1B0GVG4 234 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 ESYT3A0FGR9 886 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 F6X3S4 739 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 EREGO14944 169 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 CD2BP2O95400 341 aaKnown RBP5.19□□□□□ -1.58
TDP1-217ENST00000557782 NR3C2P08235 984 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 AMPD3Q01432 767 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 APOBRQ0VD83 1088 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 TRIP4Q15650 581 aaPredicted RBP5.19□□□□□ -1.58
TDP1-217ENST00000557782 SNAP47Q5SQN1 464 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 KIAA0319Q5VV43 1072 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 SV2BQ7L1I2 683 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 CCAR1Q8IX12 1150 aaKnown RBP5.19□□□□□ -1.58
TDP1-217ENST00000557782 EXOC8Q8IYI6 725 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 FAM9AQ8IZU1 332 aaPredicted RBP5.19□□□□□ -1.58
TDP1-217ENST00000557782 NKD1Q969G9 470 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 AIDAQ96BJ3 306 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 RHOVQ96L33 236 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 KCNQ5Q9NR82 932 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 SLC52A1Q9NWF4 448 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 TMEM63CQ9P1W3 806 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 G3BP2Q9UN86 482 aaKnown RBP5.19□□□□□ -1.58
TDP1-217ENST00000557782 MSRB2Q9Y3D2 182 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 RTCBQ9Y3I0 505 aaKnown RBP5.19□□□□□ -1.58
TDP1-217ENST00000557782 KCNMB2Q9Y691 235 aa5.19□□□□□ -1.58
TDP1-217ENST00000557782 POTEB3A0JP26 581 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 SMAD7O15105 426 aaKnown RBP5.18□□□□□ -1.58
TDP1-217ENST00000557782 PDGFRBP09619 1106 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 GYS2P54840 703 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 FCGRTP55899 365 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 MAP3K11Q16584 847 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 FBXL19Q6PCT2 694 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 POTEBQ6S5H4 581 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 BICDL1Q6ZP65 573 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 C16orf86Q6ZW13 317 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 KIAA0907Q7Z7F0 614 aaPredicted RBP5.18□□□□□ -1.58
TDP1-217ENST00000557782 C3orf58Q8NDZ4 430 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 MORC4Q8TE76 937 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 CEP89Q96ST8 783 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 DNAJC7Q99615 494 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 FEZ1Q99689 392 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 TRIM56Q9BRZ2 755 aaKnown RBP5.18□□□□□ -1.58
TDP1-217ENST00000557782 OXCT2Q9BYC2 517 aaPredicted RBP5.18□□□□□ -1.58
TDP1-217ENST00000557782 PCGF6Q9BYE7 350 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 CHRDQ9H2X0 955 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 ZFYVE1Q9HBF4 777 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 TMEM260Q9NX78 707 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 ABI2Q9NYB9 513 aaPredicted RBP5.18□□□□□ -1.58
TDP1-217ENST00000557782 USP20Q9Y2K6 914 aa5.18□□□□□ -1.58
TDP1-217ENST00000557782 RNF223E7ERA6 249 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 PDPK1O15530 556 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 SIAH2O43255 324 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 GREM1O60565 184 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 EDN3P14138 238 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 CES1P23141 567 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 INPP5BP32019 993 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 PTPN5P54829 565 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 EIF6P56537 245 aaKnown RBP5.17□□□□□ -1.58
TDP1-217ENST00000557782 LMNB2Q03252 620 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 FAM160A1Q05DH4 1040 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 RASGRF1Q13972 1273 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 SLC27A3Q5K4L6 730 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 PLA2G2CQ5R387 149 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 TTC39BQ5VTQ0 682 aaPredicted RBP5.17□□□□□ -1.58
TDP1-217ENST00000557782 PRPF40BQ6NWY9 871 aaKnown RBP5.17□□□□□ -1.58
TDP1-217ENST00000557782 DTHD1Q6ZMT9 781 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 BTLAQ7Z6A9 289 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 LILRB2Q8N423 598 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 C1orf127Q8N9H9 656 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 KDF1Q8NAX2 398 aaPredicted RBP5.17□□□□□ -1.58
TDP1-217ENST00000557782 PHC3Q8NDX5 983 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 GLIS3Q8NEA6 775 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 ZNF526Q8TF50 670 aaPredicted RBP5.17□□□□□ -1.58
TDP1-217ENST00000557782 JDP2Q8WYK2 163 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 SHDQ96IW2 340 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 HSH2DQ96JZ2 352 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 ACTR10Q9NZ32 417 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 UBP1Q9NZI7 540 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 AKAP2Q9Y2D5 859 aa5.17□□□□□ -1.58
TDP1-217ENST00000557782 MAP4K4O95819 1239 aaPredicted RBP5.16□□□□□ -1.58
TDP1-217ENST00000557782 PF4P02776 101 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 GPC1P35052 558 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 VEGFBP49765 207 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 LIG3P49916 1009 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 MAP3K10Q02779 954 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 DDR2Q16832 855 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 C4orf17Q53FE4 359 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 ODR4Q5SWX8 454 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 DIEXFQ68CQ4 756 aaKnown RBP5.16□□□□□ -1.58
TDP1-217ENST00000557782 Q6ZVU0 165 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 FERMT3Q86UX7 667 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 SLITRK4Q8IW52 837 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 GOLM1Q8NBJ4 401 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 ZNF280CQ8ND82 737 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 OR6P1Q8NGX9 317 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 STAG1Q8WVM7 1258 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 OTUD5Q96G74 571 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 CRBNQ96SW2 442 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 CEP44Q9C0F1 390 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 KANSL2Q9H9L4 492 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms