RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 EAPPQ56P03 285 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-222ENST00000556768 NSFL1CQ9UNZ2 370 aaKnown RBP9.35□□□□□ -0.91
SCFD1-222ENST00000556768 POTECB2RU33 542 aa9.35□□□□□ -0.91
SCFD1-222ENST00000556768 PDE8AO60658 829 aa9.35□□□□□ -0.91
SCFD1-222ENST00000556768 PCCAP05165 728 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-222ENST00000556768 RPS8P62241 208 aaKnown RBP9.35□□□□□ -0.91
SCFD1-222ENST00000556768 FKBP5Q13451 457 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-222ENST00000556768 CHADLQ6NUI6 762 aa9.35□□□□□ -0.91
SCFD1-222ENST00000556768 LDHDQ86WU2 507 aa9.35□□□□□ -0.91
SCFD1-222ENST00000556768 ZNRF3Q9ULT6 936 aa9.35□□□□□ -0.91
SCFD1-222ENST00000556768 G3V3G9 751 aa9.34□□□□□ -0.91
SCFD1-222ENST00000556768 C6orf229H3BNL8 230 aa9.34□□□□□ -0.91
SCFD1-222ENST00000556768 EPHX2P34913 555 aa9.34□□□□□ -0.91
SCFD1-222ENST00000556768 TNIP1Q15025 636 aa9.34□□□□□ -0.91
SCFD1-222ENST00000556768 AOC3Q16853 763 aa9.34□□□□□ -0.91
SCFD1-222ENST00000556768 WASHC4Q2M389 1173 aa9.34□□□□□ -0.91
SCFD1-222ENST00000556768 RTFDC1Q9BY42 306 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-222ENST00000556768 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-222ENST00000556768 FANCIQ9NVI1 1328 aa9.34□□□□□ -0.91
SCFD1-222ENST00000556768 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
SCFD1-222ENST00000556768 FLIIQ13045 1269 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 MFSD10Q14728 455 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 EYA3Q99504 573 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 LARP6Q9BRS8 491 aaKnown RBP9.33□□□□□ -0.92
SCFD1-222ENST00000556768 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 ZNF541Q9H0D2 1346 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 ANKRD31Q8N7Z5 1873 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 KIAA2012Q0VF49 1180 aa9.33□□□□□ -0.92
SCFD1-222ENST00000556768 CELF1Q92879 486 aaKnown RBP9.33□□□□□ -0.92
SCFD1-222ENST00000556768 CDC5LQ99459 802 aaKnown RBP9.33□□□□□ -0.92
SCFD1-222ENST00000556768 ZC3H12CQ9C0D7 883 aaKnown RBP9.33□□□□□ -0.92
SCFD1-222ENST00000556768 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
SCFD1-222ENST00000556768 VAMP4O75379 141 aa9.32□□□□□ -0.92
SCFD1-222ENST00000556768 ANKRD18AQ8IVF6 992 aa9.32□□□□□ -0.92
SCFD1-222ENST00000556768 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
SCFD1-222ENST00000556768 PDE4AP27815 886 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 CIAPIN1Q6FI81 312 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 DNAJC5GQ8N7S2 189 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 DNAAF4Q8WXU2 420 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 KLRG1Q96E93 195 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-222ENST00000556768 NUP98P52948 1817 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 NEURL1BA8MQ27 555 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 IGKV5-2P06315 115 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 CXCL9Q07325 125 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 CWF19L2Q2TBE0 894 aaKnown RBP9.31□□□□□ -0.92
SCFD1-222ENST00000556768 USP50Q70EL3 339 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-222ENST00000556768 LINS1Q8NG48 757 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-222ENST00000556768 CCDC85AQ96PX6 553 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-222ENST00000556768 GGA1Q9UJY5 639 aa9.31□□□□□ -0.92
SCFD1-222ENST00000556768 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-222ENST00000556768 CDHR2Q9BYE9 1310 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 E9PSI1 815 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 H7C1D1 291 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 RIMBP2O15034 1052 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 RAD17O75943 681 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 CTSWP56202 376 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 HTRA3P83110 453 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 GCKRQ14397 625 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 G2E3Q7L622 706 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 UBE3BQ7Z3V4 1068 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 CNTROBQ8N137 903 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 SEC31BQ9NQW1 1179 aa9.3□□□□□ -0.92
SCFD1-222ENST00000556768 ADARB2Q9NS39 739 aaKnown RBP9.3□□□□□ -0.92
SCFD1-222ENST00000556768 UFL1O94874 794 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 POTEIP0CG38 1075 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 POTEJP0CG39 1038 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 IGHMBP2P38935 993 aaKnown RBP9.29□□□□□ -0.92
SCFD1-222ENST00000556768 GPSM2P81274 684 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 TTLL11Q8NHH1 800 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 MPHOSPH8Q99549 860 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 CRISPLD2Q9H0B8 497 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 SBF1O95248 1867 aa9.29□□□□□ -0.92
SCFD1-222ENST00000556768 TMEM88BA6NKF7 163 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 H7C1W4 665 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 EPS15P42566 896 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 SCNN1DP51172 638 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 CAMK2BQ13554 666 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 TBC1D16Q8TBP0 767 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 ZMYND15Q9H091 742 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 BSDC1Q9NW68 430 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-222ENST00000556768 C9orf78Q9NZ63 289 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-222ENST00000556768 GPRC5DQ9NZD1 345 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 POLLQ9UGP5 575 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 XDHP47989 1333 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 FER1L6Q2WGJ9 1857 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 SNED1Q8TER0 1413 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 TNRC6CQ9HCJ0 1690 aaKnown RBP9.28□□□□□ -0.92
SCFD1-222ENST00000556768 CCER2I3L3R5 266 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 GMPSP49915 693 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-222ENST00000556768 MAP1SQ66K74 1059 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-222ENST00000556768 SLC4A10Q6U841 1118 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 DBNDD1Q9H9R9 158 aa9.28□□□□□ -0.92
SCFD1-222ENST00000556768 ECE2O60344 883 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 ATP2B4P23634 1241 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 RPS12P25398 132 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms