RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
SNX6-208ENST00000556712 PSME4Q14997 1843 aa13.13□□□□□ -0.31
SNX6-208ENST00000556712 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
SNX6-208ENST00000556712 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
SNX6-208ENST00000556712 YDJCA8MPS7 323 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 RAD17O75943 681 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
SNX6-208ENST00000556712 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 LMBR1LQ6UX01 489 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 PODXL2Q9NZ53 605 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 XDHP47989 1333 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 ZBED9Q6R2W3 1325 aa13.12□□□□□ -0.31
SNX6-208ENST00000556712 IQCA1LA6NCM1 817 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 HSPA6P17066 643 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 SCNN1DP51172 638 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 CXCL9Q07325 125 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 EYA3Q99504 573 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
SNX6-208ENST00000556712 BSDC1Q9NW68 430 aaPredicted RBP13.11□□□□□ -0.31
SNX6-208ENST00000556712 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 UTYO14607 1347 aa13.11□□□□□ -0.31
SNX6-208ENST00000556712 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
SNX6-208ENST00000556712 ECE2O60344 883 aa13.1□□□□□ -0.31
SNX6-208ENST00000556712 EPHX2P34913 555 aa13.1□□□□□ -0.31
SNX6-208ENST00000556712 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
SNX6-208ENST00000556712 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
SNX6-208ENST00000556712 ZNF594Q96JF6 807 aaPredicted RBP13.1□□□□□ -0.31
SNX6-208ENST00000556712 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
SNX6-208ENST00000556712 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
SNX6-208ENST00000556712 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
SNX6-208ENST00000556712 BCAR3O75815 825 aa13.09□□□□□ -0.31
SNX6-208ENST00000556712 EPS15P42566 896 aa13.09□□□□□ -0.31
SNX6-208ENST00000556712 FSTL1Q12841 308 aa13.09□□□□□ -0.31
SNX6-208ENST00000556712 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
SNX6-208ENST00000556712 CIAPIN1Q6FI81 312 aa13.09□□□□□ -0.31
SNX6-208ENST00000556712 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
SNX6-208ENST00000556712 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
SNX6-208ENST00000556712 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
SNX6-208ENST00000556712 ATP2B4P23634 1241 aa13.08□□□□□ -0.32
SNX6-208ENST00000556712 KLRK1P26718 216 aa13.08□□□□□ -0.32
SNX6-208ENST00000556712 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
SNX6-208ENST00000556712 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
SNX6-208ENST00000556712 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
SNX6-208ENST00000556712 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.32
SNX6-208ENST00000556712 HTRA3P83110 453 aa13.08□□□□□ -0.32
SNX6-208ENST00000556712 CHRNDQ07001 517 aa13.08□□□□□ -0.32
SNX6-208ENST00000556712 ANKRD44Q8N8A2 993 aa13.08□□□□□ -0.32
SNX6-208ENST00000556712 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
SNX6-208ENST00000556712 ZC3H12CQ9C0D7 883 aaKnown RBP13.08□□□□□ -0.32
SNX6-208ENST00000556712 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
SNX6-208ENST00000556712 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
SNX6-208ENST00000556712 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
SNX6-208ENST00000556712 SNAP23O00161 211 aa13.07□□□□□ -0.32
SNX6-208ENST00000556712 PSMD14O00487 310 aa13.07□□□□□ -0.32
SNX6-208ENST00000556712 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
SNX6-208ENST00000556712 TAF7LQ5H9L4 462 aa13.07□□□□□ -0.32
SNX6-208ENST00000556712 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
SNX6-208ENST00000556712 HELBQ8NG08 1087 aaPredicted RBP13.07□□□□□ -0.32
SNX6-208ENST00000556712 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
SNX6-208ENST00000556712 G3V3G9 751 aa13.06□□□□□ -0.32
SNX6-208ENST00000556712 TAF5LO75529 589 aa13.06□□□□□ -0.32
SNX6-208ENST00000556712 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
SNX6-208ENST00000556712 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
SNX6-208ENST00000556712 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
SNX6-208ENST00000556712 LDHDQ86WU2 507 aa13.06□□□□□ -0.32
SNX6-208ENST00000556712 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
SNX6-208ENST00000556712 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
SNX6-208ENST00000556712 TRIM27P14373 513 aa13.05□□□□□ -0.32
SNX6-208ENST00000556712 TNIP1Q15025 636 aa13.05□□□□□ -0.32
SNX6-208ENST00000556712 MAP1SQ66K74 1059 aaPredicted RBP13.05□□□□□ -0.32
SNX6-208ENST00000556712 KLHDC4Q8TBB5 520 aa13.05□□□□□ -0.32
SNX6-208ENST00000556712 PUS3Q9BZE2 481 aaKnown RBP13.05□□□□□ -0.32
SNX6-208ENST00000556712 ZNF804BA4D1E1 1349 aa13.05□□□□□ -0.32
SNX6-208ENST00000556712 PLIN1O60240 522 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 KCNJ4P48050 445 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 APLP1P51693 650 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 LDHAL6AQ6ZMR3 332 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 PNMA8AQ86V59 439 aaPredicted RBP13.04□□□□□ -0.32
SNX6-208ENST00000556712 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 MEIS3Q99687 375 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 ANKRD2Q9GZV1 360 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
SNX6-208ENST00000556712 UBTFL1P0CB47 393 aaPredicted RBP13.03□□□□□ -0.32
SNX6-208ENST00000556712 ATF7IPQ6VMQ6 1270 aa13.03□□□□□ -0.32
SNX6-208ENST00000556712 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
SNX6-208ENST00000556712 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
SNX6-208ENST00000556712 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
SNX6-208ENST00000556712 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
SNX6-208ENST00000556712 EGFRP00533 1210 aa13.02□□□□□ -0.33
SNX6-208ENST00000556712 LRRC24Q50LG9 513 aa13.02□□□□□ -0.33
SNX6-208ENST00000556712 USP50Q70EL3 339 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms