RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 WASHC4Q2M389 1173 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-215ENST00000555616 SSH1Q8WYL5 1049 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 EYA3Q99504 573 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 BSDC1Q9NW68 430 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-215ENST00000555616 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 UFL1O94874 794 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 CIAPIN1Q6FI81 312 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-215ENST00000555616 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 SMC4Q9NTJ3 1288 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 GPRC5DQ9NZD1 345 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 ANKIB1Q9P2G1 1089 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 ZNF609O15014 1411 aa12.16□□□□□ -0.46
ACTN1-215ENST00000555616 RAD17O75943 681 aa12.15□□□□□ -0.46
ACTN1-215ENST00000555616 ITGA6P23229 1130 aa12.15□□□□□ -0.46
ACTN1-215ENST00000555616 EPS15P42566 896 aa12.15□□□□□ -0.46
ACTN1-215ENST00000555616 GMPSP49915 693 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-215ENST00000555616 FOXO4P98177 505 aa12.15□□□□□ -0.46
ACTN1-215ENST00000555616 TNIP1Q15025 636 aa12.15□□□□□ -0.46
ACTN1-215ENST00000555616 EAPPQ56P03 285 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-215ENST00000555616 GPR101Q96P66 508 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-215ENST00000555616 MINPP1Q9UNW1 487 aa12.15□□□□□ -0.46
ACTN1-215ENST00000555616 SUPT16HQ9Y5B9 1047 aaKnown RBP12.15□□□□□ -0.46
ACTN1-215ENST00000555616 MED23Q9ULK4 1368 aa12.15□□□□□ -0.46
ACTN1-215ENST00000555616 UTYO14607 1347 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 PASKQ96RG2 1323 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 SPEF2Q9C093 1822 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 ECE2O60344 883 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
ACTN1-215ENST00000555616 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 ZC3H12CQ9C0D7 883 aaKnown RBP12.14□□□□□ -0.47
ACTN1-215ENST00000555616 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
ACTN1-215ENST00000555616 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
ACTN1-215ENST00000555616 NEFLP07196 543 aa12.13□□□□□ -0.47
ACTN1-215ENST00000555616 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
ACTN1-215ENST00000555616 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-215ENST00000555616 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
ACTN1-215ENST00000555616 HTRA3P83110 453 aa12.13□□□□□ -0.47
ACTN1-215ENST00000555616 EPHA10Q5JZY3 1008 aa12.13□□□□□ -0.47
ACTN1-215ENST00000555616 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-215ENST00000555616 ADARB2Q9NS39 739 aaKnown RBP12.13□□□□□ -0.47
ACTN1-215ENST00000555616 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-215ENST00000555616 GTF3C3Q9Y5Q9 886 aa12.13□□□□□ -0.47
ACTN1-215ENST00000555616 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
ACTN1-215ENST00000555616 PSMD14O00487 310 aa12.12□□□□□ -0.47
ACTN1-215ENST00000555616 IPO8O15397 1037 aaKnown RBP12.12□□□□□ -0.47
ACTN1-215ENST00000555616 BCAR3O75815 825 aa12.12□□□□□ -0.47
ACTN1-215ENST00000555616 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-215ENST00000555616 RPS12P25398 132 aaKnown RBP12.12□□□□□ -0.47
ACTN1-215ENST00000555616 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
ACTN1-215ENST00000555616 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
ACTN1-215ENST00000555616 DPF2Q92785 391 aa12.12□□□□□ -0.47
ACTN1-215ENST00000555616 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
ACTN1-215ENST00000555616 A0A1B0GUL6 1792 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-215ENST00000555616 IFIT5Q13325 482 aaKnown RBP12.11□□□□□ -0.47
ACTN1-215ENST00000555616 LMBR1LQ6UX01 489 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-215ENST00000555616 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 SUCLG2Q96I99 432 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 MPHOSPH8Q99549 860 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 LEMD3Q9Y2U8 911 aa12.11□□□□□ -0.47
ACTN1-215ENST00000555616 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
ACTN1-215ENST00000555616 PSME4Q14997 1843 aa12.1□□□□□ -0.47
ACTN1-215ENST00000555616 WTIPA6NIX2 430 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-215ENST00000555616 MS4A1P11836 297 aa12.1□□□□□ -0.47
ACTN1-215ENST00000555616 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-215ENST00000555616 MAP1SQ66K74 1059 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-215ENST00000555616 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
ACTN1-215ENST00000555616 KCNQ5Q9NR82 932 aa12.1□□□□□ -0.47
ACTN1-215ENST00000555616 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-215ENST00000555616 ZNF804BA4D1E1 1349 aa12.1□□□□□ -0.47
ACTN1-215ENST00000555616 VIL1P09327 827 aaKnown RBP12.09□□□□□ -0.47
ACTN1-215ENST00000555616 CHRNDQ07001 517 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 CCDC57Q2TAC2 916 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 PODNQ7Z5L7 613 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 TRPM4Q8TD43 1214 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 ZC3H15Q8WU90 426 aaKnown RBP12.09□□□□□ -0.47
ACTN1-215ENST00000555616 PGAP2Q9UHJ9 254 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 CNOT7Q9UIV1 285 aaKnown RBP12.09□□□□□ -0.47
ACTN1-215ENST00000555616 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 ZNF646O15015 1829 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-215ENST00000555616 IRS2Q9Y4H2 1338 aa12.09□□□□□ -0.47
ACTN1-215ENST00000555616 SHTN1A0MZ66 631 aa12.08□□□□□ -0.48
ACTN1-215ENST00000555616 G3V3G9 751 aa12.08□□□□□ -0.48
ACTN1-215ENST00000555616 KLRK1P26718 216 aa12.08□□□□□ -0.48
ACTN1-215ENST00000555616 HIRAP54198 1017 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-215ENST00000555616 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms