RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 DHX32Q7L7V1 743 aaKnown RBP19.08■□□□□ 0.65
TUBB3-209ENST00000555609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.08■□□□□ 0.65
TUBB3-209ENST00000555609 ATG3Q9NT62 314 aa19.08■□□□□ 0.65
TUBB3-209ENST00000555609 DCCP43146 1447 aa19.08■□□□□ 0.64
TUBB3-209ENST00000555609 LAMB4A4D0S4 1761 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 H3BQV1 296 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 IFFO2Q5TF58 517 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 TDRD7Q8NHU6 1098 aaKnown RBP19.07■□□□□ 0.64
TUBB3-209ENST00000555609 DBNDD2Q9BQY9 259 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 AGXT2Q9BYV1 514 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 FAM13BQ9NYF5 915 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 TAF6LQ9Y6J9 622 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 AFDNP55196 1824 aaKnown RBP19.07■□□□□ 0.64
TUBB3-209ENST00000555609 ARFGEF2Q9Y6D5 1785 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 CYP21A2P08686 494 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 IL15P40933 162 aaPredicted RBP19.07■□□□□ 0.64
TUBB3-209ENST00000555609 CABP4P57796 275 aa19.07■□□□□ 0.64
TUBB3-209ENST00000555609 ZNF830Q96NB3 372 aaPredicted RBP19.07■□□□□ 0.64
TUBB3-209ENST00000555609 PARP4Q9UKK3 1724 aaKnown RBP19.06■□□□□ 0.64
TUBB3-209ENST00000555609 AP5Z1O43299 807 aa19.06■□□□□ 0.64
TUBB3-209ENST00000555609 LRRFIP1Q32MZ4 808 aaKnown RBP19.06■□□□□ 0.64
TUBB3-209ENST00000555609 FBXL16Q8N461 479 aa19.06■□□□□ 0.64
TUBB3-209ENST00000555609 BRF1Q92994 677 aa19.06■□□□□ 0.64
TUBB3-209ENST00000555609 TCEANC2Q96MN5 208 aa19.06■□□□□ 0.64
TUBB3-209ENST00000555609 HSP90B1P14625 803 aaKnown RBP19.05■□□□□ 0.64
TUBB3-209ENST00000555609 STK3Q13188 491 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 EDC3Q96F86 508 aaKnown RBP19.05■□□□□ 0.64
TUBB3-209ENST00000555609 DNAJC2Q99543 621 aaKnown RBP19.05■□□□□ 0.64
TUBB3-209ENST00000555609 CYP27B1O15528 508 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 CIAO1O76071 339 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 CSB-PGBD3P0DP91 1061 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 ATF3P18847 181 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 RBM10P98175 930 aaKnown RBP19.05■□□□□ 0.64
TUBB3-209ENST00000555609 FOXO4P98177 505 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 PLCB2Q00722 1185 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 TPRNQ4KMQ1 711 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 ZMYM1Q5SVZ6 1142 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 CBX8Q9HC52 389 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 TFIP11Q9UBB9 837 aaKnown RBP19.05■□□□□ 0.64
TUBB3-209ENST00000555609 SPEF2Q9C093 1822 aa19.05■□□□□ 0.64
TUBB3-209ENST00000555609 CPDO75976 1380 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 TOM1O60784 492 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 CDC25BP30305 580 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 EXOSC10Q01780 885 aaKnown RBP19.04■□□□□ 0.64
TUBB3-209ENST00000555609 CHAF1AQ13111 956 aaPredicted RBP19.04■□□□□ 0.64
TUBB3-209ENST00000555609 COL9A3Q14050 684 aaPredicted RBP19.04■□□□□ 0.64
TUBB3-209ENST00000555609 LMBR1LQ6UX01 489 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 BICD2Q8TD16 824 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 PGBD1Q96JS3 809 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 ZNF396Q96N95 335 aaPredicted RBP19.04■□□□□ 0.64
TUBB3-209ENST00000555609 PAG1Q9NWQ8 432 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 CWC25Q9NXE8 425 aaPredicted RBP19.04■□□□□ 0.64
TUBB3-209ENST00000555609 FBXO3Q9UK99 471 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 RCOR1Q9UKL0 485 aa19.04■□□□□ 0.64
TUBB3-209ENST00000555609 FGD1P98174 961 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 ANO6Q4KMQ2 910 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 FAM173BQ6P4H8 233 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 FBXO41Q8TF61 875 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 ZNF274Q96GC6 653 aaPredicted RBP19.03■□□□□ 0.64
TUBB3-209ENST00000555609 JAK2O60674 1132 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 SCRN1Q12765 414 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 CAMK4Q16566 473 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 CCDC191Q8NCU4 936 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 RGS22Q8NE09 1264 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 KCNF1Q9H3M0 494 aa19.03■□□□□ 0.64
TUBB3-209ENST00000555609 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
TUBB3-209ENST00000555609 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
TUBB3-209ENST00000555609 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
TUBB3-209ENST00000555609 GLI3P10071 1580 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 ATP5J2-PTCD1G3V325 749 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 PTCD1O75127 700 aaKnown RBP19.01■□□□□ 0.63
TUBB3-209ENST00000555609 DDX46Q7L014 1031 aaKnown RBP19.01■□□□□ 0.63
TUBB3-209ENST00000555609 TNS3Q68CZ2 1445 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 ERVV-2B6SEH9 535 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 EYA2O00167 538 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 RNF113AO15541 343 aaKnown RBP19.01■□□□□ 0.63
TUBB3-209ENST00000555609 NR1I2O75469 434 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 ZNF75DP51815 510 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 SARM1Q6SZW1 724 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 CCDC129Q6ZRS4 1044 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 SLAIN2Q9P270 581 aa19.01■□□□□ 0.63
TUBB3-209ENST00000555609 ADD1P35611 737 aaKnown RBP19■□□□□ 0.63
TUBB3-209ENST00000555609 ZNF165P49910 485 aa19■□□□□ 0.63
TUBB3-209ENST00000555609 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
TUBB3-209ENST00000555609 LUZP1Q86V48 1076 aa19■□□□□ 0.63
TUBB3-209ENST00000555609 CKAP2LQ8IYA6 745 aa19■□□□□ 0.63
TUBB3-209ENST00000555609 SEC62Q99442 399 aaKnown RBP19■□□□□ 0.63
TUBB3-209ENST00000555609 CTNNA3Q9UI47 895 aa19■□□□□ 0.63
TUBB3-209ENST00000555609 CHMP3Q9Y3E7 222 aa19■□□□□ 0.63
TUBB3-209ENST00000555609 NEMFO60524 1076 aa18.99■□□□□ 0.63
TUBB3-209ENST00000555609 EVCP57679 992 aa18.99■□□□□ 0.63
TUBB3-209ENST00000555609 STOX1Q6ZVD7 989 aa18.99■□□□□ 0.63
TUBB3-209ENST00000555609 ZFYP08048 801 aaPredicted RBP18.99■□□□□ 0.63
TUBB3-209ENST00000555609 PYCARDQ9ULZ3 195 aa18.99■□□□□ 0.63
TUBB3-209ENST00000555609 SALL1Q9NSC2 1324 aa18.98■□□□□ 0.63
TUBB3-209ENST00000555609 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
TUBB3-209ENST00000555609 ABCC12Q96J65 1359 aa18.98■□□□□ 0.63
TUBB3-209ENST00000555609 GOLIM4O00461 696 aa18.98■□□□□ 0.63
TUBB3-209ENST00000555609 MPNDQ8N594 471 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms