RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 FER1L6Q2WGJ9 1857 aa12.28□□□□□ -0.44
PSEN1-213ENST00000555386 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
PSEN1-213ENST00000555386 ANP32AP39687 249 aaKnown RBP12.28□□□□□ -0.44
PSEN1-213ENST00000555386 MVPQ14764 893 aaKnown RBP12.28□□□□□ -0.44
PSEN1-213ENST00000555386 KLHDC4Q8TBB5 520 aa12.28□□□□□ -0.44
PSEN1-213ENST00000555386 C7orf43Q8WVR3 580 aa12.28□□□□□ -0.44
PSEN1-213ENST00000555386 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
PSEN1-213ENST00000555386 ATP6V0A2Q9Y487 856 aa12.28□□□□□ -0.44
PSEN1-213ENST00000555386 SBF1O95248 1867 aa12.28□□□□□ -0.44
PSEN1-213ENST00000555386 GNAI2P04899 355 aa12.27□□□□□ -0.44
PSEN1-213ENST00000555386 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.44
PSEN1-213ENST00000555386 ZNF277Q9NRM2 450 aaPredicted RBP12.27□□□□□ -0.44
PSEN1-213ENST00000555386 ANKIB1Q9P2G1 1089 aa12.27□□□□□ -0.44
PSEN1-213ENST00000555386 NSFL1CQ9UNZ2 370 aaKnown RBP12.27□□□□□ -0.44
PSEN1-213ENST00000555386 NFKBIEO00221 500 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 ZBTB7BO15156 539 aaPredicted RBP12.27□□□□□ -0.45
PSEN1-213ENST00000555386 GPSM2P81274 684 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 SOGA3Q5TF21 947 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 DPP8Q6V1X1 898 aaPredicted RBP12.27□□□□□ -0.45
PSEN1-213ENST00000555386 SP8Q8IXZ3 490 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 MPNDQ8N594 471 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 GPR101Q96P66 508 aaPredicted RBP12.27□□□□□ -0.45
PSEN1-213ENST00000555386 SIL1Q9H173 461 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 CNNM1Q9NRU3 951 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.45
PSEN1-213ENST00000555386 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
PSEN1-213ENST00000555386 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
PSEN1-213ENST00000555386 HELBQ8NG08 1087 aaPredicted RBP12.26□□□□□ -0.45
PSEN1-213ENST00000555386 RNF181Q9P0P0 153 aa12.26□□□□□ -0.45
PSEN1-213ENST00000555386 DDX19BQ9UMR2 479 aa12.26□□□□□ -0.45
PSEN1-213ENST00000555386 RTL9Q8NET4 1388 aa12.26□□□□□ -0.45
PSEN1-213ENST00000555386 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
PSEN1-213ENST00000555386 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
PSEN1-213ENST00000555386 PDE4AP27815 886 aa12.25□□□□□ -0.45
PSEN1-213ENST00000555386 RABL6Q3YEC7 729 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-213ENST00000555386 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
PSEN1-213ENST00000555386 BACH2Q9BYV9 841 aa12.25□□□□□ -0.45
PSEN1-213ENST00000555386 PUS3Q9BZE2 481 aaKnown RBP12.25□□□□□ -0.45
PSEN1-213ENST00000555386 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-213ENST00000555386 PA2G4Q9UQ80 394 aaKnown RBP12.25□□□□□ -0.45
PSEN1-213ENST00000555386 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-213ENST00000555386 PRELPP51888 382 aa12.24□□□□□ -0.45
PSEN1-213ENST00000555386 FKBP4Q02790 459 aaKnown RBP eCLIP12.24□□□□□ -0.45
PSEN1-213ENST00000555386 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
PSEN1-213ENST00000555386 TMC4Q7Z404 712 aa12.24□□□□□ -0.45
PSEN1-213ENST00000555386 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
PSEN1-213ENST00000555386 MINPP1Q9UNW1 487 aa12.24□□□□□ -0.45
PSEN1-213ENST00000555386 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 TAF5LO75529 589 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 UFL1O94874 794 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 LMNB1P20700 586 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 KCNJ4P48050 445 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 AOC3Q16853 763 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
PSEN1-213ENST00000555386 SNAP23O00161 211 aa12.22□□□□□ -0.45
PSEN1-213ENST00000555386 PPIP5K2O43314 1243 aa12.22□□□□□ -0.45
PSEN1-213ENST00000555386 CHRNDQ07001 517 aa12.22□□□□□ -0.45
PSEN1-213ENST00000555386 MKRN4PQ13434 485 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-213ENST00000555386 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-213ENST00000555386 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
PSEN1-213ENST00000555386 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
PSEN1-213ENST00000555386 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
PSEN1-213ENST00000555386 DICER1Q9UPY3 1922 aaKnown RBP12.22□□□□□ -0.45
PSEN1-213ENST00000555386 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
PSEN1-213ENST00000555386 RFX5P48382 616 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-213ENST00000555386 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
PSEN1-213ENST00000555386 METTL24Q5JXM2 366 aa12.21□□□□□ -0.45
PSEN1-213ENST00000555386 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
PSEN1-213ENST00000555386 TBC1D16Q8TBP0 767 aa12.21□□□□□ -0.45
PSEN1-213ENST00000555386 ZBTB40Q9NUA8 1239 aa12.21□□□□□ -0.45
PSEN1-213ENST00000555386 XDHP47989 1333 aa12.21□□□□□ -0.45
PSEN1-213ENST00000555386 A0A1B0GUL6 1792 aa12.21□□□□□ -0.46
PSEN1-213ENST00000555386 G3V3G9 751 aa12.21□□□□□ -0.46
PSEN1-213ENST00000555386 YY1P25490 414 aa12.21□□□□□ -0.46
PSEN1-213ENST00000555386 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.46
PSEN1-213ENST00000555386 DOK7Q18PE1 504 aa12.21□□□□□ -0.46
PSEN1-213ENST00000555386 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.46
PSEN1-213ENST00000555386 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.46
PSEN1-213ENST00000555386 PSMD1Q99460 953 aa12.21□□□□□ -0.46
PSEN1-213ENST00000555386 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 ATP2B4P23634 1241 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 WASHC4Q2M389 1173 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 CEP85Q6P2H3 762 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 SNED1Q8TER0 1413 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 ANKRD2Q9GZV1 360 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
PSEN1-213ENST00000555386 DUOX1Q9NRD9 1551 aa12.2□□□□□ -0.46
PSEN1-213ENST00000555386 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 EYA2O00167 538 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 APBB1O00213 710 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 KLRK1P26718 216 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-213ENST00000555386 NIM1KQ8IY84 436 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 JDP2Q8WYK2 163 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 636.8 ms