RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 PPIP5K2O43314 1243 aa15.02■□□□□ -0
ACTN1-214ENST00000555075 UFL1O94874 794 aa15.02■□□□□ -0
ACTN1-214ENST00000555075 RLBP1P12271 317 aa15.02■□□□□ -0
ACTN1-214ENST00000555075 ZNF594Q96JF6 807 aaPredicted RBP15.02■□□□□ -0
ACTN1-214ENST00000555075 PSMD1Q99460 953 aa15.02■□□□□ -0
ACTN1-214ENST00000555075 SRGAP3O43295 1099 aa15.01□□□□□ -0.01
ACTN1-214ENST00000555075 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
ACTN1-214ENST00000555075 GPSM2P81274 684 aa15.01□□□□□ -0.01
ACTN1-214ENST00000555075 RABL6Q3YEC7 729 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-214ENST00000555075 NIM1KQ8IY84 436 aa15.01□□□□□ -0.01
ACTN1-214ENST00000555075 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
ACTN1-214ENST00000555075 ZC3H12CQ9C0D7 883 aaKnown RBP15.01□□□□□ -0.01
ACTN1-214ENST00000555075 RIMBP2O15034 1052 aa15□□□□□ -0.01
ACTN1-214ENST00000555075 ATP2B4P23634 1241 aa15□□□□□ -0.01
ACTN1-214ENST00000555075 OS9Q13438 667 aaPredicted RBP15□□□□□ -0.01
ACTN1-214ENST00000555075 WASHC4Q2M389 1173 aa15□□□□□ -0.01
ACTN1-214ENST00000555075 DPY19L2Q6NUT2 758 aa15□□□□□ -0.01
ACTN1-214ENST00000555075 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
ACTN1-214ENST00000555075 MINPP1Q9UNW1 487 aa15□□□□□ -0.01
ACTN1-214ENST00000555075 EIF6P56537 245 aaKnown RBP14.99□□□□□ -0.01
ACTN1-214ENST00000555075 METTL24Q5JXM2 366 aa14.99□□□□□ -0.01
ACTN1-214ENST00000555075 KAZALD1Q96I82 304 aa14.99□□□□□ -0.01
ACTN1-214ENST00000555075 VPS33BQ9H267 617 aa14.99□□□□□ -0.01
ACTN1-214ENST00000555075 MYH3P11055 1940 aa14.99□□□□□ -0.01
ACTN1-214ENST00000555075 MROH5Q6ZUA9 1318 aa14.98□□□□□ -0.01
ACTN1-214ENST00000555075 KIF3CO14782 793 aa14.98□□□□□ -0.01
ACTN1-214ENST00000555075 ZBTB7BO15156 539 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-214ENST00000555075 CHRNDQ07001 517 aa14.98□□□□□ -0.01
ACTN1-214ENST00000555075 AOC3Q16853 763 aa14.98□□□□□ -0.01
ACTN1-214ENST00000555075 SIL1Q9H173 461 aa14.98□□□□□ -0.01
ACTN1-214ENST00000555075 LEMD3Q9Y2U8 911 aa14.98□□□□□ -0.01
ACTN1-214ENST00000555075 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
ACTN1-214ENST00000555075 HMMRO75330 724 aa14.97□□□□□ -0.01
ACTN1-214ENST00000555075 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-214ENST00000555075 G3BP1Q13283 466 aaKnown RBP eCLIP14.97□□□□□ -0.013e-12■□□□□ 10.1
ACTN1-214ENST00000555075 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
ACTN1-214ENST00000555075 HELBQ8NG08 1087 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-214ENST00000555075 TBC1D16Q8TBP0 767 aa14.97□□□□□ -0.01
ACTN1-214ENST00000555075 PODXL2Q9NZ53 605 aa14.97□□□□□ -0.01
ACTN1-214ENST00000555075 ZNF804BA4D1E1 1349 aa14.96□□□□□ -0.01
ACTN1-214ENST00000555075 KDM2BQ8NHM5 1336 aa14.96□□□□□ -0.01
ACTN1-214ENST00000555075 EYA2O00167 538 aa14.96□□□□□ -0.01
ACTN1-214ENST00000555075 TAF5LO75529 589 aa14.96□□□□□ -0.01
ACTN1-214ENST00000555075 KLHDC4Q8TBB5 520 aa14.96□□□□□ -0.01
ACTN1-214ENST00000555075 RTFDC1Q9BY42 306 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-214ENST00000555075 NMRK2Q9NPI5 230 aa14.96□□□□□ -0.01
ACTN1-214ENST00000555075 CEP126Q9P2H0 1117 aa14.96□□□□□ -0.01
ACTN1-214ENST00000555075 ZC3H4Q9UPT8 1303 aaKnown RBP14.95□□□□□ -0.02
ACTN1-214ENST00000555075 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
ACTN1-214ENST00000555075 KIAA2012Q0VF49 1180 aa14.95□□□□□ -0.02
ACTN1-214ENST00000555075 VPS37DQ86XT2 251 aa14.95□□□□□ -0.02
ACTN1-214ENST00000555075 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
ACTN1-214ENST00000555075 IL15P40933 162 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-214ENST00000555075 DOK7Q18PE1 504 aa14.94□□□□□ -0.02
ACTN1-214ENST00000555075 LRRC24Q50LG9 513 aa14.94□□□□□ -0.02
ACTN1-214ENST00000555075 SLC51AQ86UW1 340 aa14.94□□□□□ -0.02
ACTN1-214ENST00000555075 RPAP2Q8IXW5 612 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-214ENST00000555075 FBXW7Q969H0 707 aa14.94□□□□□ -0.02
ACTN1-214ENST00000555075 PUS3Q9BZE2 481 aaKnown RBP14.94□□□□□ -0.02
ACTN1-214ENST00000555075 POLLQ9UGP5 575 aa14.94□□□□□ -0.02
ACTN1-214ENST00000555075 ZNRF3Q9ULT6 936 aa14.94□□□□□ -0.02
ACTN1-214ENST00000555075 GJA3Q9Y6H8 435 aa14.94□□□□□ -0.02
ACTN1-214ENST00000555075 TIAM2Q8IVF5 1701 aa14.93□□□□□ -0.02
ACTN1-214ENST00000555075 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-214ENST00000555075 SURF6O75683 361 aaKnown RBP14.93□□□□□ -0.02
ACTN1-214ENST00000555075 CIAO1O76071 339 aa14.93□□□□□ -0.02
ACTN1-214ENST00000555075 IFIT1P09914 478 aaKnown RBP14.93□□□□□ -0.02
ACTN1-214ENST00000555075 PTPN12Q05209 780 aaKnown RBP14.93□□□□□ -0.02
ACTN1-214ENST00000555075 MTX1Q13505 466 aa14.93□□□□□ -0.02
ACTN1-214ENST00000555075 ZNF804AQ7Z570 1209 aa14.93□□□□□ -0.02
ACTN1-214ENST00000555075 GPR101Q96P66 508 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-214ENST00000555075 DBNDD1Q9H9R9 158 aa14.93□□□□□ -0.02
ACTN1-214ENST00000555075 PA2G4Q9UQ80 394 aaKnown RBP14.93□□□□□ -0.02
ACTN1-214ENST00000555075 SBF1O95248 1867 aa14.93□□□□□ -0.02
ACTN1-214ENST00000555075 TAF1P21675 1872 aa14.93□□□□□ -0.02
ACTN1-214ENST00000555075 ECE2O60344 883 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 SLC5A1P13866 664 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 HSPA6P17066 643 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 TNIP1Q15025 636 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 CAVIN4Q5BKX8 364 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 C16orf71Q8IYS4 520 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-214ENST00000555075 CRBNQ96SW2 442 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 COPRSQ9NQ92 184 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 AKAP2Q9Y2D5 859 aa14.92□□□□□ -0.02
ACTN1-214ENST00000555075 FER1L6Q2WGJ9 1857 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 MED23Q9ULK4 1368 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 TOMM70O94826 608 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 PDE8BO95263 885 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 LMOD1P29536 600 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-214ENST00000555075 RFX5P48382 616 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-214ENST00000555075 PRELPP51888 382 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 UBE4AQ14139 1066 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 PUM3Q15397 648 aaKnown RBP14.91□□□□□ -0.02
ACTN1-214ENST00000555075 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 CEP85Q6P2H3 762 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 BCL11AQ9H165 835 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
ACTN1-214ENST00000555075 RIPOR2Q9Y4F9 1068 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms