RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 NSFL1CQ9UNZ2 370 aaKnown RBP15.11■□□□□ 0.01
RIPK3-204ENST00000554756 HDAC5Q9UQL6 1122 aa15.11■□□□□ 0.01
RIPK3-204ENST00000554756 PDE4AP27815 886 aa15.11■□□□□ 0.01
RIPK3-204ENST00000554756 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
RIPK3-204ENST00000554756 SNED1Q8TER0 1413 aa15.1■□□□□ 0.01
RIPK3-204ENST00000554756 LTBP3Q9NS15 1303 aa15.1■□□□□ 0.01
RIPK3-204ENST00000554756 ZBTB7BO15156 539 aaPredicted RBP15.1■□□□□ 0.01
RIPK3-204ENST00000554756 GNAI2P04899 355 aa15.1■□□□□ 0.01
RIPK3-204ENST00000554756 GRIPAP1Q4V328 841 aa15.1■□□□□ 0.01
RIPK3-204ENST00000554756 PSMD1Q99460 953 aa15.1■□□□□ 0.01
RIPK3-204ENST00000554756 C1orf115Q9H7X2 142 aa15.1■□□□□ 0.01
RIPK3-204ENST00000554756 MVPQ14764 893 aaKnown RBP15.09■□□□□ 0.01
RIPK3-204ENST00000554756 ANKIB1Q9P2G1 1089 aa15.09■□□□□ 0.01
RIPK3-204ENST00000554756 MINPP1Q9UNW1 487 aa15.09■□□□□ 0.01
RIPK3-204ENST00000554756 C6orf229H3BNL8 230 aa15.08■□□□□ 0.01
RIPK3-204ENST00000554756 IARSP41252 1262 aaKnown RBP15.08■□□□□ 0.01
RIPK3-204ENST00000554756 LDHAL6AQ6ZMR3 332 aa15.08■□□□□ 0.01
RIPK3-204ENST00000554756 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0.01
RIPK3-204ENST00000554756 PUS3Q9BZE2 481 aaKnown RBP15.08■□□□□ 0.01
RIPK3-204ENST00000554756 ERICH6Q7L0X2 663 aa15.08■□□□□ 0
RIPK3-204ENST00000554756 ZNF784Q8NCA9 323 aaPredicted RBP15.08■□□□□ 0
RIPK3-204ENST00000554756 SUPT20HQ8NEM7 779 aa15.08■□□□□ 0
RIPK3-204ENST00000554756 GPR101Q96P66 508 aaPredicted RBP15.08■□□□□ 0
RIPK3-204ENST00000554756 RTFDC1Q9BY42 306 aaPredicted RBP15.08■□□□□ 0
RIPK3-204ENST00000554756 CNNM1Q9NRU3 951 aa15.08■□□□□ 0
RIPK3-204ENST00000554756 MYH3P11055 1940 aa15.08■□□□□ 0
RIPK3-204ENST00000554756 PPIP5K2O43314 1243 aa15.07■□□□□ 0
RIPK3-204ENST00000554756 AOC3Q16853 763 aa15.07■□□□□ 0
RIPK3-204ENST00000554756 HELBQ8NG08 1087 aaPredicted RBP15.07■□□□□ 0
RIPK3-204ENST00000554756 POLLQ9UGP5 575 aa15.07■□□□□ 0
RIPK3-204ENST00000554756 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 WTIPA6NIX2 430 aaPredicted RBP15.06■□□□□ 0
RIPK3-204ENST00000554756 RIMBP2O15034 1052 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 UFL1O94874 794 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
RIPK3-204ENST00000554756 CHRNDQ07001 517 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 LARGE2Q8N3Y3 721 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 TBC1D16Q8TBP0 767 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 IPO9Q96P70 1041 aaKnown RBP15.06■□□□□ 0
RIPK3-204ENST00000554756 GGA1Q9UJY5 639 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 CHD4Q14839 1912 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 LRRC24Q50LG9 513 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
RIPK3-204ENST00000554756 XDHP47989 1333 aa15.05■□□□□ 0
RIPK3-204ENST00000554756 SRGAP3O43295 1099 aa15.05■□□□□ -0
RIPK3-204ENST00000554756 TAF5LO75529 589 aa15.05■□□□□ -0
RIPK3-204ENST00000554756 ATP2B4P23634 1241 aa15.05■□□□□ -0
RIPK3-204ENST00000554756 ANKRD2Q9GZV1 360 aa15.05■□□□□ -0
RIPK3-204ENST00000554756 PA2G4Q9UQ80 394 aaKnown RBP15.05■□□□□ -0
RIPK3-204ENST00000554756 LRRC37AA6NMS7 1700 aa15.05■□□□□ -0
RIPK3-204ENST00000554756 PTPN12Q05209 780 aaKnown RBP15.04■□□□□ -0
RIPK3-204ENST00000554756 WASHC4Q2M389 1173 aa15.04■□□□□ -0
RIPK3-204ENST00000554756 ZNF526Q8TF50 670 aaPredicted RBP15.04■□□□□ -0
RIPK3-204ENST00000554756 SIL1Q9H173 461 aa15.04■□□□□ -0
RIPK3-204ENST00000554756 DUOX1Q9NRD9 1551 aa15.04■□□□□ -0
RIPK3-204ENST00000554756 PNMA6EA0A0J9YXQ4 647 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 SNAP23O00161 211 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 KCNJ4P48050 445 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 NIM1KQ8IY84 436 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 JDP2Q8WYK2 163 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 EYA3Q99504 573 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 RIPOR2Q9Y4F9 1068 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 SPEF2Q9C093 1822 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 KIAA2012Q0VF49 1180 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 MTX1Q13505 466 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 DOK7Q18PE1 504 aa15.03■□□□□ -0
RIPK3-204ENST00000554756 ZC3H12CQ9C0D7 883 aaKnown RBP15.03■□□□□ -0
RIPK3-204ENST00000554756 CHMP4BQ9H444 224 aaKnown RBP15.03■□□□□ -0
RIPK3-204ENST00000554756 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
RIPK3-204ENST00000554756 ZNF804BA4D1E1 1349 aa15.02□□□□□ -0.01
RIPK3-204ENST00000554756 EYA2O00167 538 aa15.02□□□□□ -0.01
RIPK3-204ENST00000554756 ATP8B2P98198 1209 aa15.02□□□□□ -0.01
RIPK3-204ENST00000554756 METTL24Q5JXM2 366 aa15.02□□□□□ -0.01
RIPK3-204ENST00000554756 VPS33BQ9H267 617 aa15.02□□□□□ -0.01
RIPK3-204ENST00000554756 ZBTB40Q9NUA8 1239 aa15.02□□□□□ -0.01
RIPK3-204ENST00000554756 LEMD3Q9Y2U8 911 aa15.02□□□□□ -0.01
RIPK3-204ENST00000554756 COL4A5P29400 1685 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 RWDD1Q9H446 243 aaPredicted RBP15.01□□□□□ -0.01
RIPK3-204ENST00000554756 DBNDD1Q9H9R9 158 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 G3V3G9 751 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 KLRK1P26718 216 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 CEP85Q6P2H3 762 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 SBF1O95248 1867 aa15.01□□□□□ -0.01
RIPK3-204ENST00000554756 ZNF541Q9H0D2 1346 aa15□□□□□ -0.01
RIPK3-204ENST00000554756 ATG9AQ7Z3C6 839 aa15□□□□□ -0.01
RIPK3-204ENST00000554756 TXNRD3Q86VQ6 643 aa15□□□□□ -0.01
RIPK3-204ENST00000554756 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
RIPK3-204ENST00000554756 COPRSQ9NQ92 184 aa15□□□□□ -0.01
RIPK3-204ENST00000554756 LTBP1Q14766 1721 aa14.99□□□□□ -0.01
RIPK3-204ENST00000554756 FZD9O00144 591 aa14.99□□□□□ -0.01
RIPK3-204ENST00000554756 EIF6P56537 245 aaKnown RBP14.99□□□□□ -0.01
RIPK3-204ENST00000554756 C1QTNF8P60827 252 aa14.99□□□□□ -0.01
RIPK3-204ENST00000554756 POLA2Q14181 598 aa14.99□□□□□ -0.01
RIPK3-204ENST00000554756 ZNRF3Q9ULT6 936 aa14.99□□□□□ -0.01
RIPK3-204ENST00000554756 ZC3H4Q9UPT8 1303 aaKnown RBP14.99□□□□□ -0.01
RIPK3-204ENST00000554756 ECE2O60344 883 aa14.98□□□□□ -0.01
RIPK3-204ENST00000554756 CIAO1O76071 339 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms