RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 MINPP1Q9UNW1 487 aa15.2■□□□□ 0.02
SHMT2-209ENST00000553949 RIPOR2Q9Y4F9 1068 aa15.2■□□□□ 0.02
SHMT2-209ENST00000553949 SLX4Q8IY92 1834 aa15.2■□□□□ 0.02
SHMT2-209ENST00000553949 TAF1P21675 1872 aa15.19■□□□□ 0.02
SHMT2-209ENST00000553949 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
SHMT2-209ENST00000553949 CHRNDQ07001 517 aa15.19■□□□□ 0.02
SHMT2-209ENST00000553949 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
SHMT2-209ENST00000553949 ATG9AQ7Z3C6 839 aa15.19■□□□□ 0.02
SHMT2-209ENST00000553949 NOP58Q9Y2X3 529 aaKnown RBP15.19■□□□□ 0.02
SHMT2-209ENST00000553949 MROH5Q6ZUA9 1318 aa15.18■□□□□ 0.02
SHMT2-209ENST00000553949 IL15P40933 162 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-209ENST00000553949 GPSM2P81274 684 aa15.18■□□□□ 0.02
SHMT2-209ENST00000553949 G3BP1Q13283 466 aaKnown RBP eCLIP15.18■□□□□ 0.028e-8■■■□□ 16.6
SHMT2-209ENST00000553949 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-209ENST00000553949 GPR162Q16538 588 aa15.18■□□□□ 0.02
SHMT2-209ENST00000553949 GRIPAP1Q4V328 841 aa15.18■□□□□ 0.02
SHMT2-209ENST00000553949 RTKN2Q8IZC4 609 aa15.18■□□□□ 0.02
SHMT2-209ENST00000553949 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
SHMT2-209ENST00000553949 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
SHMT2-209ENST00000553949 OS9Q13438 667 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-209ENST00000553949 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
SHMT2-209ENST00000553949 DPP8Q6V1X1 898 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-209ENST00000553949 MPNDQ8N594 471 aa15.17■□□□□ 0.02
SHMT2-209ENST00000553949 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
SHMT2-209ENST00000553949 ANKIB1Q9P2G1 1089 aa15.17■□□□□ 0.02
SHMT2-209ENST00000553949 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
SHMT2-209ENST00000553949 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
SHMT2-209ENST00000553949 XDHP47989 1333 aa15.17■□□□□ 0.02
SHMT2-209ENST00000553949 TAF5LO75529 589 aa15.16■□□□□ 0.02
SHMT2-209ENST00000553949 HSP90AB4PQ58FF6 505 aa15.16■□□□□ 0.02
SHMT2-209ENST00000553949 HELBQ8NG08 1087 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-209ENST00000553949 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-209ENST00000553949 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
SHMT2-209ENST00000553949 LRRC37AA6NMS7 1700 aa15.15■□□□□ 0.02
SHMT2-209ENST00000553949 SASH1O94885 1247 aa15.15■□□□□ 0.02
SHMT2-209ENST00000553949 ERICH6BQ5W0A0 696 aa15.15■□□□□ 0.02
SHMT2-209ENST00000553949 ARHGAP27Q6ZUM4 889 aa15.15■□□□□ 0.02
SHMT2-209ENST00000553949 VGLL2Q8N8G2 317 aa15.15■□□□□ 0.02
SHMT2-209ENST00000553949 CEP126Q9P2H0 1117 aa15.15■□□□□ 0.02
SHMT2-209ENST00000553949 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
SHMT2-209ENST00000553949 NFKBIEO00221 500 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 UFL1O94874 794 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 PDE8BO95263 885 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 IGHDP01880 384 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 ATP2B4P23634 1241 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 FKBP4Q02790 459 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHMT2-209ENST00000553949 TFCP2Q12800 502 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 ERC1Q8IUD2 1116 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 PSMD1Q99460 953 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 RTFDC1Q9BY42 306 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-209ENST00000553949 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 POLLQ9UGP5 575 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 LEMD3Q9Y2U8 911 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 CACNA1SQ13698 1873 aa15.14■□□□□ 0.01
SHMT2-209ENST00000553949 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
SHMT2-209ENST00000553949 WTIPA6NIX2 430 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-209ENST00000553949 C6orf229H3BNL8 230 aa15.13■□□□□ 0.01
SHMT2-209ENST00000553949 RAB11FIP3O75154 756 aa15.13■□□□□ 0.01
SHMT2-209ENST00000553949 KCNJ4P48050 445 aa15.13■□□□□ 0.01
SHMT2-209ENST00000553949 SUPT20HQ8NEM7 779 aa15.13■□□□□ 0.01
SHMT2-209ENST00000553949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-209ENST00000553949 ZNF804BA4D1E1 1349 aa15.13■□□□□ 0.01
SHMT2-209ENST00000553949 SNAP23O00161 211 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 APBB1O00213 710 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 UBE4AQ14139 1066 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 PUM3Q15397 648 aaKnown RBP15.12■□□□□ 0.01
SHMT2-209ENST00000553949 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 KIF1BPQ96EK5 621 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 GPR101Q96P66 508 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-209ENST00000553949 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 UTRNP46939 3433 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 LTBP3Q9NS15 1303 aa15.12■□□□□ 0.01
SHMT2-209ENST00000553949 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
SHMT2-209ENST00000553949 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
SHMT2-209ENST00000553949 FGFR2P21802 821 aa15.11■□□□□ 0.01
SHMT2-209ENST00000553949 RASSF7Q02833 373 aa15.11■□□□□ 0.01
SHMT2-209ENST00000553949 RHPN1Q8TCX5 695 aa15.11■□□□□ 0.01
SHMT2-209ENST00000553949 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-209ENST00000553949 AKAP2Q9Y2D5 859 aa15.11■□□□□ 0.01
SHMT2-209ENST00000553949 LTBP1Q14766 1721 aa15.11■□□□□ 0.01
SHMT2-209ENST00000553949 KLRK1P26718 216 aa15.1■□□□□ 0.01
SHMT2-209ENST00000553949 ATP2B3Q16720 1220 aa15.1■□□□□ 0.01
SHMT2-209ENST00000553949 WASHC4Q2M389 1173 aa15.1■□□□□ 0.01
SHMT2-209ENST00000553949 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
SHMT2-209ENST00000553949 LPIN2Q92539 896 aa15.1■□□□□ 0.01
SHMT2-209ENST00000553949 EYA3Q99504 573 aa15.1■□□□□ 0.01
SHMT2-209ENST00000553949 LRRCC1Q9C099 1032 aa15.1■□□□□ 0.01
SHMT2-209ENST00000553949 RIMBP2O15034 1052 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 SLC5A1P13866 664 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 TNNI3KQ59H18 835 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 CCDC136Q96JN2 1154 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 VPS33BQ9H267 617 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 IL1RAPL2Q9NP60 686 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 GPR108Q9NPR9 543 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 FPGT-TNNI3KV9GXZ4 949 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 IRS2Q9Y4H2 1338 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 MED23Q9ULK4 1368 aa15.09■□□□□ 0.01
SHMT2-209ENST00000553949 A0A1B0GUL7 405 aa15.08■□□□□ 0
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