RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 NECTIN2Q92692 538 aa11.15□□□□□ -0.62
NPC2-204ENST00000553490 CELF1Q92879 486 aaKnown RBP11.15□□□□□ -0.62
NPC2-204ENST00000553490 ZNF428Q96B54 188 aa11.15□□□□□ -0.62
NPC2-204ENST00000553490 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
NPC2-204ENST00000553490 ZNF609O15014 1411 aa11.15□□□□□ -0.62
NPC2-204ENST00000553490 GPSM2P81274 684 aa11.14□□□□□ -0.63
NPC2-204ENST00000553490 TCIRG1Q13488 830 aa11.14□□□□□ -0.63
NPC2-204ENST00000553490 PKN2Q16513 984 aaKnown RBP11.14□□□□□ -0.63
NPC2-204ENST00000553490 ANGEL2Q5VTE6 544 aaKnown RBP11.14□□□□□ -0.63
NPC2-204ENST00000553490 PLEKHF1Q96S99 279 aa11.14□□□□□ -0.63
NPC2-204ENST00000553490 KCNQ5Q9NR82 932 aa11.14□□□□□ -0.63
NPC2-204ENST00000553490 POLLQ9UGP5 575 aa11.14□□□□□ -0.63
NPC2-204ENST00000553490 HTTP42858 3142 aa11.13□□□□□ -0.63
NPC2-204ENST00000553490 FKBP1BP68106 108 aa11.13□□□□□ -0.63
NPC2-204ENST00000553490 ZNF296Q8WUU4 475 aaPredicted RBP11.13□□□□□ -0.63
NPC2-204ENST00000553490 VIL1P09327 827 aaKnown RBP11.12□□□□□ -0.63
NPC2-204ENST00000553490 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
NPC2-204ENST00000553490 GCC1Q96CN9 775 aa11.12□□□□□ -0.63
NPC2-204ENST00000553490 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 G3V3G9 751 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 UFL1O94874 794 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 ZNF280AP59817 542 aaPredicted RBP11.11□□□□□ -0.63
NPC2-204ENST00000553490 SCARF1Q14162 830 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
NPC2-204ENST00000553490 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 FBXO46Q6PJ61 603 aaPredicted RBP11.11□□□□□ -0.63
NPC2-204ENST00000553490 MOB2Q70IA6 237 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 FAM89AQ96GI7 184 aa11.11□□□□□ -0.63
NPC2-204ENST00000553490 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
NPC2-204ENST00000553490 RTL5Q5HYW3 569 aaPredicted RBP11.1□□□□□ -0.63
NPC2-204ENST00000553490 RSBN1LQ6PCB5 846 aaPredicted RBP11.1□□□□□ -0.63
NPC2-204ENST00000553490 AGBL3Q8NEM8 1001 aa11.1□□□□□ -0.63
NPC2-204ENST00000553490 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
NPC2-204ENST00000553490 CHPF2Q9P2E5 772 aa11.1□□□□□ -0.63
NPC2-204ENST00000553490 MKI67P46013 3256 aaKnown RBP11.1□□□□□ -0.63
NPC2-204ENST00000553490 ATP5J2-PTCD1G3V325 749 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 GPR25O00155 361 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 TTLL12Q14166 644 aaPredicted RBP11.09□□□□□ -0.63
NPC2-204ENST00000553490 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
NPC2-204ENST00000553490 PLBD2Q8NHP8 589 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 ISCA1Q9BUE6 129 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 MYOZ2Q9NPC6 264 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 BABAM1Q9NWV8 329 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 PODXL2Q9NZ53 605 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 GGA1Q9UJY5 639 aa11.09□□□□□ -0.63
NPC2-204ENST00000553490 SCAF8Q9UPN6 1271 aaKnown RBP11.09□□□□□ -0.63
NPC2-204ENST00000553490 ZNF646O15015 1829 aaPredicted RBP11.08□□□□□ -0.64
NPC2-204ENST00000553490 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
NPC2-204ENST00000553490 IRS4O14654 1257 aaPredicted RBP11.08□□□□□ -0.64
NPC2-204ENST00000553490 USP17L8P0C7I0 530 aa11.08□□□□□ -0.64
NPC2-204ENST00000553490 RIPK4P57078 832 aa11.08□□□□□ -0.64
NPC2-204ENST00000553490 RPS8P62241 208 aaKnown RBP11.08□□□□□ -0.64
NPC2-204ENST00000553490 LMOD3Q0VAK6 560 aa11.08□□□□□ -0.64
NPC2-204ENST00000553490 SREBF2Q12772 1141 aa11.08□□□□□ -0.64
NPC2-204ENST00000553490 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
NPC2-204ENST00000553490 KRT24Q2M2I5 525 aa11.08□□□□□ -0.64
NPC2-204ENST00000553490 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
NPC2-204ENST00000553490 HDGFL1Q5TGJ6 251 aa11.08□□□□□ -0.64
NPC2-204ENST00000553490 RBBP6Q7Z6E9 1792 aaKnown RBP11.08□□□□□ -0.64
NPC2-204ENST00000553490 FKTNO75072 461 aa11.07□□□□□ -0.64
NPC2-204ENST00000553490 NF2P35240 595 aa11.07□□□□□ -0.64
NPC2-204ENST00000553490 HABP4Q5JVS0 413 aaKnown RBP11.07□□□□□ -0.64
NPC2-204ENST00000553490 TM4SF4P48230 202 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 PRAMEF18Q5VWM3 479 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 GMLQ99445 158 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 SEC31BQ9NQW1 1179 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 SPEF2Q9C093 1822 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 CENPFP49454 3210 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 XDHP47989 1333 aa11.06□□□□□ -0.64
NPC2-204ENST00000553490 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
NPC2-204ENST00000553490 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
NPC2-204ENST00000553490 NBPF9Q3BBW0 867 aa11.05□□□□□ -0.64
NPC2-204ENST00000553490 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
NPC2-204ENST00000553490 CFHR5Q9BXR6 569 aa11.05□□□□□ -0.64
NPC2-204ENST00000553490 MED23Q9ULK4 1368 aa11.04□□□□□ -0.64
NPC2-204ENST00000553490 BRCA2P51587 3418 aa11.04□□□□□ -0.64
NPC2-204ENST00000553490 LAMB1P07942 1786 aa11.04□□□□□ -0.64
NPC2-204ENST00000553490 HOXB7P09629 217 aa11.04□□□□□ -0.64
NPC2-204ENST00000553490 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
NPC2-204ENST00000553490 TMPOP42166 694 aaKnown RBP11.04□□□□□ -0.64
NPC2-204ENST00000553490 CCDC152Q4G0S7 254 aa11.04□□□□□ -0.64
NPC2-204ENST00000553490 ZBTB38Q8NAP3 1195 aaPredicted RBP11.04□□□□□ -0.64
NPC2-204ENST00000553490 R3HDMLQ9H3Y0 253 aa11.04□□□□□ -0.64
NPC2-204ENST00000553490 DBF4Q9UBU7 674 aaPredicted RBP11.04□□□□□ -0.64
NPC2-204ENST00000553490 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
NPC2-204ENST00000553490 POTEFA5A3E0 1075 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 SASH1O94885 1247 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 TRIM28Q13263 835 aaKnown RBP11.03□□□□□ -0.64
NPC2-204ENST00000553490 PRKG1Q13976 671 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 PODNQ7Z5L7 613 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
NPC2-204ENST00000553490 HYPKQ9NX55 129 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 TRIM17Q9Y577 477 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms