RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 PRELPP51888 382 aa23.31■■□□□ 1.32
DDX54-209ENST00000551912 LDHAL6AQ6ZMR3 332 aa23.31■■□□□ 1.32
DDX54-209ENST00000551912 RTFDC1Q9BY42 306 aaPredicted RBP23.31■■□□□ 1.32
DDX54-209ENST00000551912 ZNF277Q9NRM2 450 aaPredicted RBP23.31■■□□□ 1.32
DDX54-209ENST00000551912 PODXL2Q9NZ53 605 aa23.31■■□□□ 1.32
DDX54-209ENST00000551912 RNF181Q9P0P0 153 aa23.31■■□□□ 1.32
DDX54-209ENST00000551912 MTX1Q13505 466 aa23.3■■□□□ 1.32
DDX54-209ENST00000551912 CNNM1Q9NRU3 951 aa23.3■■□□□ 1.32
DDX54-209ENST00000551912 XDHP47989 1333 aa23.3■■□□□ 1.32
DDX54-209ENST00000551912 IARSP41252 1262 aaKnown RBP23.29■■□□□ 1.32
DDX54-209ENST00000551912 C1orf115Q9H7X2 142 aa23.29■■□□□ 1.32
DDX54-209ENST00000551912 C6orf229H3BNL8 230 aa23.28■■□□□ 1.32
DDX54-209ENST00000551912 SRGAP3O43295 1099 aa23.28■■□□□ 1.32
DDX54-209ENST00000551912 RFX5P48382 616 aaPredicted RBP23.28■■□□□ 1.32
DDX54-209ENST00000551912 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
DDX54-209ENST00000551912 ANKRD2Q9GZV1 360 aa23.28■■□□□ 1.32
DDX54-209ENST00000551912 GGA1Q9UJY5 639 aa23.28■■□□□ 1.32
DDX54-209ENST00000551912 CCDC88AQ3V6T2 1871 aa23.28■■□□□ 1.32
DDX54-209ENST00000551912 UFL1O94874 794 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 PTPN12Q05209 780 aaKnown RBP23.27■■□□□ 1.32
DDX54-209ENST00000551912 CHRNDQ07001 517 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 TBC1D16Q8TBP0 767 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 VPS33BQ9H267 617 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 ZBTB40Q9NUA8 1239 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 POLLQ9UGP5 575 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 LTBP1Q14766 1721 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 DUOX1Q9NRD9 1551 aa23.27■■□□□ 1.32
DDX54-209ENST00000551912 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
DDX54-209ENST00000551912 PUS3Q9BZE2 481 aaKnown RBP23.26■■□□□ 1.31
DDX54-209ENST00000551912 SUPT16HQ9Y5B9 1047 aaKnown RBP23.26■■□□□ 1.31
DDX54-209ENST00000551912 PPIP5K2O43314 1243 aa23.25■■□□□ 1.31
DDX54-209ENST00000551912 YY1P25490 414 aa23.25■■□□□ 1.31
DDX54-209ENST00000551912 LARGE2Q8N3Y3 721 aa23.25■■□□□ 1.31
DDX54-209ENST00000551912 EYA3Q99504 573 aa23.25■■□□□ 1.31
DDX54-209ENST00000551912 RIPOR2Q9Y4F9 1068 aa23.25■■□□□ 1.31
DDX54-209ENST00000551912 ATP8B2P98198 1209 aa23.24■■□□□ 1.31
DDX54-209ENST00000551912 AOC3Q16853 763 aa23.24■■□□□ 1.31
DDX54-209ENST00000551912 WASHC4Q2M389 1173 aa23.24■■□□□ 1.31
DDX54-209ENST00000551912 LRRC24Q50LG9 513 aa23.24■■□□□ 1.31
DDX54-209ENST00000551912 FBXO3Q9UK99 471 aa23.24■■□□□ 1.31
DDX54-209ENST00000551912 LEMD3Q9Y2U8 911 aa23.24■■□□□ 1.31
DDX54-209ENST00000551912 MROH5Q6ZUA9 1318 aa23.24■■□□□ 1.31
DDX54-209ENST00000551912 ZC3H4Q9UPT8 1303 aaKnown RBP23.24■■□□□ 1.31
DDX54-209ENST00000551912 DICER1Q9UPY3 1922 aaKnown RBP23.23■■□□□ 1.31
DDX54-209ENST00000551912 PNMA6EA0A0J9YXQ4 647 aa23.23■■□□□ 1.31
DDX54-209ENST00000551912 EYA2O00167 538 aa23.23■■□□□ 1.31
DDX54-209ENST00000551912 KIAA2012Q0VF49 1180 aa23.23■■□□□ 1.31
DDX54-209ENST00000551912 HELBQ8NG08 1087 aaPredicted RBP23.23■■□□□ 1.31
DDX54-209ENST00000551912 JDP2Q8WYK2 163 aa23.23■■□□□ 1.31
DDX54-209ENST00000551912 COPRSQ9NQ92 184 aa23.23■■□□□ 1.31
DDX54-209ENST00000551912 TAF5LO75529 589 aa23.22■■□□□ 1.31
DDX54-209ENST00000551912 KCNJ4P48050 445 aa23.22■■□□□ 1.31
DDX54-209ENST00000551912 CEP85Q6P2H3 762 aa23.22■■□□□ 1.31
DDX54-209ENST00000551912 SIL1Q9H173 461 aa23.22■■□□□ 1.31
DDX54-209ENST00000551912 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
DDX54-209ENST00000551912 RIMBP2O15034 1052 aa23.21■■□□□ 1.31
DDX54-209ENST00000551912 CIAO1O76071 339 aa23.21■■□□□ 1.31
DDX54-209ENST00000551912 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
DDX54-209ENST00000551912 NIM1KQ8IY84 436 aa23.21■■□□□ 1.31
DDX54-209ENST00000551912 GPR101Q96P66 508 aaPredicted RBP23.21■■□□□ 1.31
DDX54-209ENST00000551912 ZC3H12CQ9C0D7 883 aaKnown RBP23.21■■□□□ 1.31
DDX54-209ENST00000551912 ZNF804BA4D1E1 1349 aa23.21■■□□□ 1.31
DDX54-209ENST00000551912 TIAM2Q8IVF5 1701 aa23.2■■□□□ 1.3
DDX54-209ENST00000551912 POLA2Q14181 598 aa23.2■■□□□ 1.3
DDX54-209ENST00000551912 SSH3Q8TE77 659 aa23.2■■□□□ 1.3
DDX54-209ENST00000551912 WTIPA6NIX2 430 aaPredicted RBP23.19■■□□□ 1.3
DDX54-209ENST00000551912 ATG9AQ7Z3C6 839 aa23.19■■□□□ 1.3
DDX54-209ENST00000551912 CRBNQ96SW2 442 aa23.19■■□□□ 1.3
DDX54-209ENST00000551912 A0A1B0GUL6 1792 aa23.19■■□□□ 1.3
DDX54-209ENST00000551912 MED23Q9ULK4 1368 aa23.18■■□□□ 1.3
DDX54-209ENST00000551912 IL15P40933 162 aaPredicted RBP23.18■■□□□ 1.3
DDX54-209ENST00000551912 RPAP2Q8IXW5 612 aaPredicted RBP23.18■■□□□ 1.3
DDX54-209ENST00000551912 COL4A5P29400 1685 aa23.18■■□□□ 1.3
DDX54-209ENST00000551912 FZD9O00144 591 aa23.17■■□□□ 1.3
DDX54-209ENST00000551912 SNAP23O00161 211 aa23.17■■□□□ 1.3
DDX54-209ENST00000551912 PDE8BO95263 885 aa23.16■■□□□ 1.3
DDX54-209ENST00000551912 UBE4AQ14139 1066 aa23.16■■□□□ 1.3
DDX54-209ENST00000551912 VGLL2Q8N8G2 317 aa23.16■■□□□ 1.3
DDX54-209ENST00000551912 ZNRF3Q9ULT6 936 aa23.16■■□□□ 1.3
DDX54-209ENST00000551912 G3V3G9 751 aa23.15■■□□□ 1.3
DDX54-209ENST00000551912 G3BP1Q13283 466 aaKnown RBP eCLIP23.15■■□□□ 1.3
DDX54-209ENST00000551912 DOK7Q18PE1 504 aa23.15■■□□□ 1.3
DDX54-209ENST00000551912 DCAF8Q5TAQ9 597 aa23.15■■□□□ 1.3
DDX54-209ENST00000551912 DBNDD1Q9H9R9 158 aa23.15■■□□□ 1.3
DDX54-209ENST00000551912 CEP126Q9P2H0 1117 aa23.15■■□□□ 1.3
DDX54-209ENST00000551912 HMMRO75330 724 aa23.14■■□□□ 1.29
DDX54-209ENST00000551912 KLRK1P26718 216 aa23.14■■□□□ 1.29
DDX54-209ENST00000551912 EIF6P56537 245 aaKnown RBP23.14■■□□□ 1.29
DDX54-209ENST00000551912 DPY19L2Q6NUT2 758 aa23.14■■□□□ 1.29
DDX54-209ENST00000551912 C15orf52Q6ZUT6 534 aaKnown RBP23.14■■□□□ 1.29
DDX54-209ENST00000551912 GLTPD2A6NH11 291 aa23.13■■□□□ 1.29
DDX54-209ENST00000551912 ECE2O60344 883 aa23.13■■□□□ 1.29
DDX54-209ENST00000551912 SURF6O75683 361 aaKnown RBP23.13■■□□□ 1.29
DDX54-209ENST00000551912 PUM3Q15397 648 aaKnown RBP23.13■■□□□ 1.29
DDX54-209ENST00000551912 TXNRD3Q86VQ6 643 aa23.13■■□□□ 1.29
DDX54-209ENST00000551912 ZNF541Q9H0D2 1346 aa23.12■■□□□ 1.29
DDX54-209ENST00000551912 SIRT2Q8IXJ6 389 aa23.12■■□□□ 1.29
DDX54-209ENST00000551912 NOP58Q9Y2X3 529 aaKnown RBP23.12■■□□□ 1.29
DDX54-209ENST00000551912 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
DDX54-209ENST00000551912 IRS2Q9Y4H2 1338 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms