RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 KCNJ4P48050 445 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 CREB3L3Q68CJ9 461 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 RASEFQ8IZ41 740 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 ZSCAN31Q96LW9 406 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-207ENST00000551216 DNAJC2Q99543 621 aaKnown RBP17.39■□□□□ 0.37
SCN8A-207ENST00000551216 GREM2Q9H772 168 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 LIMCH1Q9UPQ0 1083 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
SCN8A-207ENST00000551216 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
SCN8A-207ENST00000551216 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
SCN8A-207ENST00000551216 ONECUT3O60422 494 aaPredicted RBP17.38■□□□□ 0.37
SCN8A-207ENST00000551216 PDIA4P13667 645 aaKnown RBP17.38■□□□□ 0.37
SCN8A-207ENST00000551216 SSFA2P28290 1259 aa17.38■□□□□ 0.37
SCN8A-207ENST00000551216 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
SCN8A-207ENST00000551216 UPF3BQ9BZI7 483 aaKnown RBP17.38■□□□□ 0.37
SCN8A-207ENST00000551216 SH2B1Q9NRF2 756 aaPredicted RBP17.38■□□□□ 0.37
SCN8A-207ENST00000551216 BTAF1O14981 1849 aa17.38■□□□□ 0.37
SCN8A-207ENST00000551216 DDX60Q8IY21 1712 aaKnown RBP17.37■□□□□ 0.37
SCN8A-207ENST00000551216 ARAP2Q8WZ64 1704 aa17.37■□□□□ 0.37
SCN8A-207ENST00000551216 ATP2B3Q16720 1220 aa17.37■□□□□ 0.37
SCN8A-207ENST00000551216 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
SCN8A-207ENST00000551216 RUFY3Q7L099 469 aa17.37■□□□□ 0.37
SCN8A-207ENST00000551216 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
SCN8A-207ENST00000551216 A0A0G2JS52 829 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 KCNQ2O43526 872 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 PDE8BO95263 885 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 ANKRD1Q15327 319 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 METTL24Q5JXM2 366 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 SLC27A2O14975 620 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
SCN8A-207ENST00000551216 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 TTC39AQ5SRH9 613 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 DSCC1Q9BVC3 393 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
SCN8A-207ENST00000551216 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.36■□□□□ 0.37
SCN8A-207ENST00000551216 LY75O60449 1722 aa17.35■□□□□ 0.37
SCN8A-207ENST00000551216 GOLIM4O00461 696 aa17.35■□□□□ 0.37
SCN8A-207ENST00000551216 RNF113AO15541 343 aaKnown RBP17.35■□□□□ 0.37
SCN8A-207ENST00000551216 NTSR2O95665 410 aa17.35■□□□□ 0.37
SCN8A-207ENST00000551216 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
SCN8A-207ENST00000551216 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
SCN8A-207ENST00000551216 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
SCN8A-207ENST00000551216 NIP7Q9Y221 180 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCN8A-207ENST00000551216 MYH7P12883 1935 aa17.34■□□□□ 0.37
SCN8A-207ENST00000551216 TTF1Q15361 905 aaPredicted RBP17.34■□□□□ 0.37
SCN8A-207ENST00000551216 ZNF589Q86UQ0 364 aaPredicted RBP17.34■□□□□ 0.37
SCN8A-207ENST00000551216 SYNE4Q8N205 404 aa17.34■□□□□ 0.37
SCN8A-207ENST00000551216 EDC3Q96F86 508 aaKnown RBP17.34■□□□□ 0.37
SCN8A-207ENST00000551216 PDRG1Q9NUG6 133 aa17.34■□□□□ 0.37
SCN8A-207ENST00000551216 ATRNO75882 1429 aa17.33■□□□□ 0.37
SCN8A-207ENST00000551216 SBF2Q86WG5 1849 aa17.33■□□□□ 0.37
SCN8A-207ENST00000551216 HMGB1P09429 215 aaKnown RBP17.33■□□□□ 0.37
SCN8A-207ENST00000551216 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.37
SCN8A-207ENST00000551216 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.37
SCN8A-207ENST00000551216 AK2P54819 239 aa17.33■□□□□ 0.37
SCN8A-207ENST00000551216 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.37
SCN8A-207ENST00000551216 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.37
SCN8A-207ENST00000551216 ZGPATQ8N5A5 531 aaKnown RBP17.33■□□□□ 0.37
SCN8A-207ENST00000551216 AKAP11Q9UKA4 1901 aa17.33■□□□□ 0.36
SCN8A-207ENST00000551216 TRAK2O60296 914 aa17.32■□□□□ 0.36
SCN8A-207ENST00000551216 RPS6KA4O75676 772 aa17.32■□□□□ 0.36
SCN8A-207ENST00000551216 BLOC1S2Q6QNY1 142 aa17.32■□□□□ 0.36
SCN8A-207ENST00000551216 LINC00116Q8NCU8 138 aa17.32■□□□□ 0.36
SCN8A-207ENST00000551216 LPIN2Q92539 896 aa17.32■□□□□ 0.36
SCN8A-207ENST00000551216 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
SCN8A-207ENST00000551216 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
SCN8A-207ENST00000551216 MEX3CQ5U5Q3 659 aaKnown RBP17.32■□□□□ 0.36
SCN8A-207ENST00000551216 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCN8A-207ENST00000551216 TAF1LQ8IZX4 1826 aa17.31■□□□□ 0.36
SCN8A-207ENST00000551216 FGFR2P21802 821 aa17.31■□□□□ 0.36
SCN8A-207ENST00000551216 ARID4AP29374 1257 aaPredicted RBP17.31■□□□□ 0.36
SCN8A-207ENST00000551216 ADCK5Q3MIX3 580 aa17.31■□□□□ 0.36
SCN8A-207ENST00000551216 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
SCN8A-207ENST00000551216 NARFQ9UHQ1 456 aa17.31■□□□□ 0.36
SCN8A-207ENST00000551216 ISY1Q9ULR0 285 aaKnown RBP17.31■□□□□ 0.36
SCN8A-207ENST00000551216 BRD1O95696 1058 aa17.3■□□□□ 0.36
SCN8A-207ENST00000551216 RPS6KB1P23443 525 aa17.3■□□□□ 0.36
SCN8A-207ENST00000551216 IGHMBP2P38935 993 aaKnown RBP17.3■□□□□ 0.36
SCN8A-207ENST00000551216 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
SCN8A-207ENST00000551216 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
SCN8A-207ENST00000551216 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
SCN8A-207ENST00000551216 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
SCN8A-207ENST00000551216 NYXQ9GZU5 481 aa17.3■□□□□ 0.36
SCN8A-207ENST00000551216 COL24A1Q17RW2 1714 aa17.3■□□□□ 0.36
SCN8A-207ENST00000551216 ADORA1P30542 326 aa17.29■□□□□ 0.36
SCN8A-207ENST00000551216 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCN8A-207ENST00000551216 CTNNA3Q9UI47 895 aa17.29■□□□□ 0.36
SCN8A-207ENST00000551216 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
SCN8A-207ENST00000551216 SLC5A1P13866 664 aa17.29■□□□□ 0.36
SCN8A-207ENST00000551216 APPBP2Q92624 585 aa17.29■□□□□ 0.36
SCN8A-207ENST00000551216 AFF2P51816 1311 aa17.28■□□□□ 0.36
SCN8A-207ENST00000551216 HCLS1P14317 486 aaPredicted RBP17.28■□□□□ 0.36
SCN8A-207ENST00000551216 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
SCN8A-207ENST00000551216 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms