RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 VPS33BQ9H267 617 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 SEC31BQ9NQW1 1179 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 MINPP1Q9UNW1 487 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 PA2G4Q9UQ80 394 aaKnown RBP9.47□□□□□ -0.89
RNF41-208ENST00000550379 EXOC6BQ9Y2D4 811 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 LEMD3Q9Y2U8 911 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 LTBP1Q14766 1721 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 KIAA1551Q9HCM1 1747 aa9.47□□□□□ -0.89
RNF41-208ENST00000550379 BRCA1P38398 1863 aaKnown RBP9.47□□□□□ -0.89
RNF41-208ENST00000550379 KCNA3P22001 575 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 TNNI3KQ59H18 835 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 ANKRD45Q5TZF3 282 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 PLEKHM2Q8IWE5 1019 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 LPIN2Q92539 896 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 RPGRQ92834 1020 aaKnown RBP9.46□□□□□ -0.9
RNF41-208ENST00000550379 CELF1Q92879 486 aaKnown RBP9.46□□□□□ -0.9
RNF41-208ENST00000550379 RTFDC1Q9BY42 306 aaPredicted RBP9.46□□□□□ -0.9
RNF41-208ENST00000550379 ATP6V0A2Q9Y487 856 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 FPGT-TNNI3KV9GXZ4 949 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 PDS5AQ29RF7 1337 aaKnown RBP9.46□□□□□ -0.9
RNF41-208ENST00000550379 IRS2Q9Y4H2 1338 aa9.46□□□□□ -0.9
RNF41-208ENST00000550379 A0A1B0GUL6 1792 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 FAM177BA6PVY3 158 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 NPHP1O15259 732 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 PDE1AP54750 535 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 PUM3Q15397 648 aaKnown RBP9.45□□□□□ -0.9
RNF41-208ENST00000550379 LRRC24Q50LG9 513 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 BMP2KLQ5H9B9 411 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 TAF7LQ5H9L4 462 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 SOGA3Q5TF21 947 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 EAF2Q96CJ1 260 aaPredicted RBP9.45□□□□□ -0.9
RNF41-208ENST00000550379 PUS3Q9BZE2 481 aaKnown RBP9.45□□□□□ -0.9
RNF41-208ENST00000550379 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
RNF41-208ENST00000550379 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 COL11A2P13942 1736 aaPredicted RBP9.45□□□□□ -0.9
RNF41-208ENST00000550379 ARAP2Q8WZ64 1704 aa9.45□□□□□ -0.9
RNF41-208ENST00000550379 SEMA3EO15041 775 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 ATP5JP18859 108 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 PDE4AP27815 886 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 CHRNDQ07001 517 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 TFCP2Q12800 502 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 MSL1Q68DK7 614 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
RNF41-208ENST00000550379 CNNM1Q9NRU3 951 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 XDHP47989 1333 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 ZNF609O15014 1411 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 SPEF2Q9C093 1822 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 TAF1P21675 1872 aa9.44□□□□□ -0.9
RNF41-208ENST00000550379 COL4A1P02462 1669 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 A0A1B0GUL7 405 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 ERC2O15083 957 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 GLRX3O76003 335 aaKnown RBP9.43□□□□□ -0.9
RNF41-208ENST00000550379 ZBTB7AO95365 584 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 MX1P20591 662 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 OS9Q13438 667 aaPredicted RBP9.43□□□□□ -0.9
RNF41-208ENST00000550379 FBXO33Q7Z6M2 555 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 C2CD5Q86YS7 1000 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 TTLL6Q8N841 843 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 GPATCH3Q96I76 525 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 LNPKQ9C0E8 428 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 ECHDC1Q9NTX5 307 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 DBNLQ9UJU6 430 aaKnown RBP9.43□□□□□ -0.9
RNF41-208ENST00000550379 CHMP3Q9Y3E7 222 aa9.43□□□□□ -0.9
RNF41-208ENST00000550379 SLX4Q8IY92 1834 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 EIF5BO60841 1220 aaKnown RBP9.42□□□□□ -0.9
RNF41-208ENST00000550379 IFIT1P09914 478 aaKnown RBP9.42□□□□□ -0.9
RNF41-208ENST00000550379 ARID4AP29374 1257 aaPredicted RBP9.42□□□□□ -0.9
RNF41-208ENST00000550379 ATP2B3Q16720 1220 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 METTL24Q5JXM2 366 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 PI4K2BQ8TCG2 481 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 PSMD1Q99460 953 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 SIL1Q9H173 461 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
RNF41-208ENST00000550379 AKAP11Q9UKA4 1901 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
RNF41-208ENST00000550379 RFX7Q2KHR2 1363 aa9.41□□□□□ -0.9
RNF41-208ENST00000550379 MED23Q9ULK4 1368 aa9.41□□□□□ -0.9
RNF41-208ENST00000550379 PPEF1O14829 653 aaPredicted RBP9.41□□□□□ -0.9
RNF41-208ENST00000550379 EPB41L2O43491 1005 aaKnown RBP9.41□□□□□ -0.9
RNF41-208ENST00000550379 IFIT2P09913 472 aaKnown RBP9.41□□□□□ -0.9
RNF41-208ENST00000550379 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
RNF41-208ENST00000550379 SLC5A1P13866 664 aa9.41□□□□□ -0.9
RNF41-208ENST00000550379 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
RNF41-208ENST00000550379 AACSQ86V21 672 aa9.41□□□□□ -0.9
RNF41-208ENST00000550379 RTKN2Q8IZC4 609 aa9.41□□□□□ -0.9
RNF41-208ENST00000550379 ATF5Q9Y2D1 282 aaPredicted RBP9.41□□□□□ -0.9
RNF41-208ENST00000550379 DPEP1P16444 411 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 TIMM10P62072 90 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 CCDC158Q5M9N0 1113 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 TTC22Q5TAA0 569 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 CCDC24Q8N4L8 307 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 HAUS7Q99871 368 aa9.4□□□□□ -0.9
RNF41-208ENST00000550379 TMX4Q9H1E5 349 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms