RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 COPS6Q7L5N1 327 aa11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 PLEKHF1Q96S99 279 aa11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 TRMT112Q9UI30 125 aaKnown RBP11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 NUDCQ9Y266 331 aa11.48□□□□□ -0.57
AC055716.1-201ENST00000550077 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
AC055716.1-201ENST00000550077 SCARF1Q14162 830 aa11.47□□□□□ -0.57
AC055716.1-201ENST00000550077 KRT24Q2M2I5 525 aa11.47□□□□□ -0.57
AC055716.1-201ENST00000550077 XAGE3Q8WTP9 111 aa11.47□□□□□ -0.57
AC055716.1-201ENST00000550077 GPR25O00155 361 aa11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 VIL1P09327 827 aaKnown RBP11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 TCIRG1Q13488 830 aa11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 SULF1Q8IWU6 871 aa11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 TBC1D16Q8TBP0 767 aa11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 FAM89AQ96GI7 184 aa11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 HDAC9Q9UKV0 1011 aa11.46□□□□□ -0.57
AC055716.1-201ENST00000550077 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
AC055716.1-201ENST00000550077 RPS12P25398 132 aaKnown RBP11.45□□□□□ -0.58
AC055716.1-201ENST00000550077 PNISRQ8TF01 805 aaKnown RBP11.45□□□□□ -0.58
AC055716.1-201ENST00000550077 FZD1Q9UP38 647 aa11.45□□□□□ -0.58
AC055716.1-201ENST00000550077 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 ZNF280AP59817 542 aaPredicted RBP11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 CAP1Q01518 475 aa11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 NFE2L2Q16236 605 aa11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 GMLQ99445 158 aa11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 MXD3Q9BW11 206 aa11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 SEC31BQ9NQW1 1179 aa11.44□□□□□ -0.58
AC055716.1-201ENST00000550077 MKI67P46013 3256 aaKnown RBP11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 TM4SF4P48230 202 aa11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 FXR1P51114 621 aaKnown RBP eCLIP11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 SF3B3Q15393 1217 aaKnown RBP11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 PKN2Q16513 984 aaKnown RBP11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 NBPF9Q3BBW0 867 aa11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 FBXO46Q6PJ61 603 aaPredicted RBP11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 TSPYL4Q9UJ04 414 aa11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 RBBP6Q7Z6E9 1792 aaKnown RBP11.43□□□□□ -0.58
AC055716.1-201ENST00000550077 SPEF2Q9C093 1822 aa11.42□□□□□ -0.58
AC055716.1-201ENST00000550077 PRKG1Q13976 671 aa11.42□□□□□ -0.58
AC055716.1-201ENST00000550077 PTPN12Q05209 780 aaKnown RBP11.41□□□□□ -0.58
AC055716.1-201ENST00000550077 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
AC055716.1-201ENST00000550077 TMC4Q7Z404 712 aa11.41□□□□□ -0.58
AC055716.1-201ENST00000550077 JARID2Q92833 1246 aaPredicted RBP11.41□□□□□ -0.58
AC055716.1-201ENST00000550077 ISCA1Q9BUE6 129 aa11.41□□□□□ -0.58
AC055716.1-201ENST00000550077 MYOZ2Q9NPC6 264 aa11.41□□□□□ -0.58
AC055716.1-201ENST00000550077 FKTNO75072 461 aa11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 UFL1O94874 794 aa11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 EN2P19622 333 aaPredicted RBP11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 RPS8P62241 208 aaKnown RBP11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 ZC3H12CQ9C0D7 883 aaKnown RBP11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 CHPF2Q9P2E5 772 aa11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 HTTP42858 3142 aa11.4□□□□□ -0.58
AC055716.1-201ENST00000550077 USP17L8P0C7I0 530 aa11.39□□□□□ -0.59
AC055716.1-201ENST00000550077 FKBP1BP68106 108 aa11.39□□□□□ -0.59
AC055716.1-201ENST00000550077 HSP90AB3PQ58FF7 597 aa11.39□□□□□ -0.59
AC055716.1-201ENST00000550077 AGBL3Q8NEM8 1001 aa11.39□□□□□ -0.59
AC055716.1-201ENST00000550077 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
AC055716.1-201ENST00000550077 CCDC85AQ96PX6 553 aaPredicted RBP11.39□□□□□ -0.59
AC055716.1-201ENST00000550077 EYA3Q99504 573 aa11.39□□□□□ -0.59
AC055716.1-201ENST00000550077 ZNF609O15014 1411 aa11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 IRS4O14654 1257 aaPredicted RBP11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 OTOP1Q7RTM1 612 aa11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 PODXL2Q9NZ53 605 aa11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 CENPFP49454 3210 aa11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 LAMB1P07942 1786 aa11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 BRCA2P51587 3418 aa11.38□□□□□ -0.59
AC055716.1-201ENST00000550077 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
AC055716.1-201ENST00000550077 ZSWIM8A7E2V4 1837 aa11.37□□□□□ -0.59
AC055716.1-201ENST00000550077 SASH1O94885 1247 aa11.37□□□□□ -0.59
AC055716.1-201ENST00000550077 PLBD2Q8NHP8 589 aa11.37□□□□□ -0.59
AC055716.1-201ENST00000550077 ANKIB1Q9P2G1 1089 aa11.37□□□□□ -0.59
AC055716.1-201ENST00000550077 G3V3G9 751 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 WNT10BO00744 389 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 RIPK4P57078 832 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 ANKRD13DQ6ZTN6 518 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 CLMNQ96JQ2 1002 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 CFHR5Q9BXR6 569 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 GGA1Q9UJY5 639 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 PCDHAC2Q9Y5I4 1007 aa11.36□□□□□ -0.59
AC055716.1-201ENST00000550077 USP17L3A6NCW0 530 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 USP17L4A6NCW7 530 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 DACT2Q5SW24 774 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 LDLRAD1Q5T700 205 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 USP17L1Q7RTZ2 530 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 SSC5DA1L4H1 1573 aa11.35□□□□□ -0.59
AC055716.1-201ENST00000550077 GJA5P36382 358 aa11.34□□□□□ -0.59
AC055716.1-201ENST00000550077 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
AC055716.1-201ENST00000550077 ANGEL1Q9UNK9 670 aaKnown RBP11.34□□□□□ -0.59
AC055716.1-201ENST00000550077 PTPN22Q9Y2R2 807 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms