RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 UTYO14607 1347 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 XDHP47989 1333 aa14.92□□□□□ -0.02
RAB5C-204ENST00000547517 POTECB2RU33 542 aa14.91□□□□□ -0.02
RAB5C-204ENST00000547517 BCAR3O75815 825 aa14.91□□□□□ -0.02
RAB5C-204ENST00000547517 IFIT5Q13325 482 aaKnown RBP14.91□□□□□ -0.02
RAB5C-204ENST00000547517 GPC2Q8N158 579 aa14.91□□□□□ -0.02
RAB5C-204ENST00000547517 L3MBTL3Q96JM7 780 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-204ENST00000547517 EYA3Q99504 573 aa14.91□□□□□ -0.02
RAB5C-204ENST00000547517 MPHOSPH8Q99549 860 aa14.91□□□□□ -0.02
RAB5C-204ENST00000547517 PODXL2Q9NZ53 605 aa14.91□□□□□ -0.02
RAB5C-204ENST00000547517 ZNRF3Q9ULT6 936 aa14.91□□□□□ -0.02
RAB5C-204ENST00000547517 IQCA1LA6NCM1 817 aa14.9□□□□□ -0.02
RAB5C-204ENST00000547517 CCT4P50991 539 aaKnown RBP14.9□□□□□ -0.02
RAB5C-204ENST00000547517 FRAT1Q92837 279 aaPredicted RBP14.9□□□□□ -0.02
RAB5C-204ENST00000547517 BICC1Q9H694 974 aaKnown RBP14.9□□□□□ -0.02
RAB5C-204ENST00000547517 DBNDD1Q9H9R9 158 aa14.9□□□□□ -0.02
RAB5C-204ENST00000547517 MINPP1Q9UNW1 487 aa14.9□□□□□ -0.02
RAB5C-204ENST00000547517 CCDC57Q2TAC2 916 aa14.89□□□□□ -0.03
RAB5C-204ENST00000547517 TAF7LQ5H9L4 462 aa14.89□□□□□ -0.03
RAB5C-204ENST00000547517 RBM46Q8TBY0 533 aaKnown RBP14.89□□□□□ -0.03
RAB5C-204ENST00000547517 KAZALD1Q96I82 304 aa14.89□□□□□ -0.03
RAB5C-204ENST00000547517 USP44Q9H0E7 712 aa14.89□□□□□ -0.03
RAB5C-204ENST00000547517 SCN4AP35499 1836 aa14.89□□□□□ -0.03
RAB5C-204ENST00000547517 YDJCA8MPS7 323 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 ECE2O60344 883 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 RAD17O75943 681 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 TRIM27P14373 513 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 ATP2B4P23634 1241 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 DOK7Q18PE1 504 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 ARHGAP45Q92619 1136 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 ZNF594Q96JF6 807 aaPredicted RBP14.88□□□□□ -0.03
RAB5C-204ENST00000547517 HACL1Q9UJ83 578 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 A0A1B0GUL6 1792 aa14.88□□□□□ -0.03
RAB5C-204ENST00000547517 IPO8O15397 1037 aaKnown RBP14.87□□□□□ -0.03
RAB5C-204ENST00000547517 CHRNDQ07001 517 aa14.87□□□□□ -0.03
RAB5C-204ENST00000547517 CXCL9Q07325 125 aa14.87□□□□□ -0.03
RAB5C-204ENST00000547517 CIAPIN1Q6FI81 312 aa14.87□□□□□ -0.03
RAB5C-204ENST00000547517 ANKRD44Q8N8A2 993 aa14.87□□□□□ -0.03
RAB5C-204ENST00000547517 SMC1BQ8NDV3 1235 aa14.87□□□□□ -0.03
RAB5C-204ENST00000547517 ZC3H12CQ9C0D7 883 aaKnown RBP14.87□□□□□ -0.03
RAB5C-204ENST00000547517 TAF1DQ9H5J8 278 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-204ENST00000547517 TNNQ9UQP3 1299 aa14.87□□□□□ -0.03
RAB5C-204ENST00000547517 MED23Q9ULK4 1368 aa14.86□□□□□ -0.03
RAB5C-204ENST00000547517 WTIPA6NIX2 430 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-204ENST00000547517 G3V3G9 751 aa14.86□□□□□ -0.03
RAB5C-204ENST00000547517 UBTFL1P0CB47 393 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-204ENST00000547517 LMOD1P29536 600 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-204ENST00000547517 EPHX2P34913 555 aa14.86□□□□□ -0.03
RAB5C-204ENST00000547517 SCNN1DP51172 638 aa14.86□□□□□ -0.03
RAB5C-204ENST00000547517 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-204ENST00000547517 EAPPQ56P03 285 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-204ENST00000547517 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
RAB5C-204ENST00000547517 ATF7IPQ6VMQ6 1270 aa14.86□□□□□ -0.03
RAB5C-204ENST00000547517 ANKRD2Q9GZV1 360 aa14.86□□□□□ -0.03
RAB5C-204ENST00000547517 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
RAB5C-204ENST00000547517 POTEJP0CG39 1038 aa14.85□□□□□ -0.03
RAB5C-204ENST00000547517 KCNJ4P48050 445 aa14.85□□□□□ -0.03
RAB5C-204ENST00000547517 GMPSP49915 693 aaPredicted RBP14.85□□□□□ -0.03
RAB5C-204ENST00000547517 FSTL1Q12841 308 aa14.85□□□□□ -0.03
RAB5C-204ENST00000547517 TNIP1Q15025 636 aa14.85□□□□□ -0.03
RAB5C-204ENST00000547517 CLUAP1Q96AJ1 413 aa14.85□□□□□ -0.03
RAB5C-204ENST00000547517 CNNM1Q9NRU3 951 aa14.85□□□□□ -0.03
RAB5C-204ENST00000547517 PSMD14O00487 310 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 KLRK1P26718 216 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 ZKSCAN2Q63HK3 967 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 INTS3Q68E01 1043 aaKnown RBP14.84□□□□□ -0.03
RAB5C-204ENST00000547517 LDHAL6AQ6ZMR3 332 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 HELBQ8NG08 1087 aaPredicted RBP14.84□□□□□ -0.03
RAB5C-204ENST00000547517 MEIS3Q99687 375 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 LEMD3Q9Y2U8 911 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 ZNF804BA4D1E1 1349 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 SCN9AQ15858 1988 aa14.84□□□□□ -0.03
RAB5C-204ENST00000547517 TAF5LO75529 589 aa14.83□□□□□ -0.04
RAB5C-204ENST00000547517 HSPA6P17066 643 aa14.83□□□□□ -0.04
RAB5C-204ENST00000547517 EPS15P42566 896 aa14.83□□□□□ -0.04
RAB5C-204ENST00000547517 KCNQ5Q9NR82 932 aa14.83□□□□□ -0.04
RAB5C-204ENST00000547517 GPRC5DQ9NZD1 345 aa14.83□□□□□ -0.04
RAB5C-204ENST00000547517 LRRFIP2Q9Y608 721 aaKnown RBP14.83□□□□□ -0.04
RAB5C-204ENST00000547517 ADAMTSL1Q8N6G6 1762 aa14.83□□□□□ -0.04
RAB5C-204ENST00000547517 SNAP23O00161 211 aa14.82□□□□□ -0.04
RAB5C-204ENST00000547517 PLIN1O60240 522 aa14.82□□□□□ -0.04
RAB5C-204ENST00000547517 LDHDQ86WU2 507 aa14.82□□□□□ -0.04
RAB5C-204ENST00000547517 PUS3Q9BZE2 481 aaKnown RBP14.82□□□□□ -0.04
RAB5C-204ENST00000547517 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
RAB5C-204ENST00000547517 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
RAB5C-204ENST00000547517 PNMA8AQ86V59 439 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-204ENST00000547517 TXNRD3Q86VQ6 643 aa14.81□□□□□ -0.04
RAB5C-204ENST00000547517 FTSJ3Q8IY81 847 aaKnown RBP14.81□□□□□ -0.04
RAB5C-204ENST00000547517 TMEM57Q8N5G2 664 aa14.81□□□□□ -0.04
RAB5C-204ENST00000547517 KLHDC4Q8TBB5 520 aa14.81□□□□□ -0.04
RAB5C-204ENST00000547517 CLEC11AQ9Y240 323 aa14.81□□□□□ -0.04
RAB5C-204ENST00000547517 PSME4Q14997 1843 aa14.8□□□□□ -0.04
RAB5C-204ENST00000547517 SHTN1A0MZ66 631 aa14.8□□□□□ -0.04
RAB5C-204ENST00000547517 MICALL2Q8IY33 904 aa14.8□□□□□ -0.04
RAB5C-204ENST00000547517 FBXW7Q969H0 707 aa14.8□□□□□ -0.04
RAB5C-204ENST00000547517 GNAI3P08754 354 aa14.79□□□□□ -0.04
RAB5C-204ENST00000547517 LRRC24Q50LG9 513 aa14.79□□□□□ -0.04
RAB5C-204ENST00000547517 METTL24Q5JXM2 366 aa14.79□□□□□ -0.04
RAB5C-204ENST00000547517 MROH5Q6ZUA9 1318 aa14.79□□□□□ -0.04
RAB5C-204ENST00000547517 PODNQ7Z5L7 613 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms