RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
TROAP-204ENST00000546776 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
TROAP-204ENST00000546776 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
TROAP-204ENST00000546776 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
TROAP-204ENST00000546776 NOP58Q9Y2X3 529 aaKnown RBP13.88□□□□□ -0.19
TROAP-204ENST00000546776 COL11A2P13942 1736 aaPredicted RBP13.87□□□□□ -0.19
TROAP-204ENST00000546776 IGHMBP2P38935 993 aaKnown RBP13.87□□□□□ -0.19
TROAP-204ENST00000546776 MPHOSPH8Q99549 860 aa13.87□□□□□ -0.19
TROAP-204ENST00000546776 GPBP1L1Q9HC44 474 aaPredicted RBP13.87□□□□□ -0.19
TROAP-204ENST00000546776 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
TROAP-204ENST00000546776 BBOX1O75936 387 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 CIAO1O76071 339 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 RFX5P48382 616 aaPredicted RBP13.86□□□□□ -0.19
TROAP-204ENST00000546776 RASSF7Q02833 373 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
TROAP-204ENST00000546776 ANKRD18AQ8IVF6 992 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 EXOC6BQ9Y2D4 811 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 LTBP3Q9NS15 1303 aa13.86□□□□□ -0.19
TROAP-204ENST00000546776 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
TROAP-204ENST00000546776 NFKBIEO00221 500 aa13.85□□□□□ -0.19
TROAP-204ENST00000546776 PPEF1O14829 653 aaPredicted RBP13.85□□□□□ -0.19
TROAP-204ENST00000546776 IL15P40933 162 aaPredicted RBP13.85□□□□□ -0.19
TROAP-204ENST00000546776 LDHAL6AQ6ZMR3 332 aa13.85□□□□□ -0.19
TROAP-204ENST00000546776 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
TROAP-204ENST00000546776 SIL1Q9H173 461 aa13.85□□□□□ -0.19
TROAP-204ENST00000546776 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
TROAP-204ENST00000546776 PA2G4Q9UQ80 394 aaKnown RBP13.85□□□□□ -0.19
TROAP-204ENST00000546776 EYA2O00167 538 aa13.84□□□□□ -0.19
TROAP-204ENST00000546776 APBB1O00213 710 aa13.84□□□□□ -0.19
TROAP-204ENST00000546776 FKBP4Q02790 459 aaKnown RBP eCLIP13.84□□□□□ -0.19
TROAP-204ENST00000546776 ANKRD45Q5TZF3 282 aa13.84□□□□□ -0.19
TROAP-204ENST00000546776 C3orf67Q6ZVT6 689 aa13.84□□□□□ -0.19
TROAP-204ENST00000546776 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
TROAP-204ENST00000546776 KLHDC4Q8TBB5 520 aa13.84□□□□□ -0.19
TROAP-204ENST00000546776 C7orf43Q8WVR3 580 aa13.84□□□□□ -0.19
TROAP-204ENST00000546776 SLX4Q8IY92 1834 aa13.83□□□□□ -0.2
TROAP-204ENST00000546776 NUCB1Q02818 461 aa13.83□□□□□ -0.2
TROAP-204ENST00000546776 GRAPQ13588 217 aa13.83□□□□□ -0.2
TROAP-204ENST00000546776 GRAPLQ8TC17 118 aaPredicted RBP13.83□□□□□ -0.2
TROAP-204ENST00000546776 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
TROAP-204ENST00000546776 ZNF594Q96JF6 807 aaPredicted RBP13.83□□□□□ -0.2
TROAP-204ENST00000546776 MROH5Q6ZUA9 1318 aa13.83□□□□□ -0.2
TROAP-204ENST00000546776 RPS8P62241 208 aaKnown RBP13.82□□□□□ -0.2
TROAP-204ENST00000546776 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
TROAP-204ENST00000546776 CHD1LQ86WJ1 897 aa13.82□□□□□ -0.2
TROAP-204ENST00000546776 CLASRPQ8N2M8 674 aaKnown RBP13.82□□□□□ -0.2
TROAP-204ENST00000546776 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
TROAP-204ENST00000546776 CEP126Q9P2H0 1117 aa13.82□□□□□ -0.2
TROAP-204ENST00000546776 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
TROAP-204ENST00000546776 TAF1P21675 1872 aa13.82□□□□□ -0.2
TROAP-204ENST00000546776 METTL24Q5JXM2 366 aa13.81□□□□□ -0.2
TROAP-204ENST00000546776 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
TROAP-204ENST00000546776 SUPT20HQ8NEM7 779 aa13.81□□□□□ -0.2
TROAP-204ENST00000546776 PSMD1Q99460 953 aa13.81□□□□□ -0.2
TROAP-204ENST00000546776 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
TROAP-204ENST00000546776 AKAP2Q9Y2D5 859 aa13.81□□□□□ -0.2
TROAP-204ENST00000546776 CACNA1SQ13698 1873 aa13.8□□□□□ -0.2
TROAP-204ENST00000546776 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
TROAP-204ENST00000546776 ATG9AQ7Z3C6 839 aa13.8□□□□□ -0.2
TROAP-204ENST00000546776 CELF1Q92879 486 aaKnown RBP13.8□□□□□ -0.2
TROAP-204ENST00000546776 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
TROAP-204ENST00000546776 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
TROAP-204ENST00000546776 SASH1O94885 1247 aa13.79□□□□□ -0.2
TROAP-204ENST00000546776 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
TROAP-204ENST00000546776 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
TROAP-204ENST00000546776 C16orf71Q8IYS4 520 aaPredicted RBP13.79□□□□□ -0.2
TROAP-204ENST00000546776 JDP2Q8WYK2 163 aa13.79□□□□□ -0.2
TROAP-204ENST00000546776 PUS3Q9BZE2 481 aaKnown RBP13.79□□□□□ -0.2
TROAP-204ENST00000546776 ANKRD2Q9GZV1 360 aa13.79□□□□□ -0.2
TROAP-204ENST00000546776 VPS33BQ9H267 617 aa13.79□□□□□ -0.2
TROAP-204ENST00000546776 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
TROAP-204ENST00000546776 GPR108Q9NPR9 543 aa13.79□□□□□ -0.2
TROAP-204ENST00000546776 ZNF277Q9NRM2 450 aaPredicted RBP13.79□□□□□ -0.2
TROAP-204ENST00000546776 A0A1B0GUL6 1792 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 FER1L6Q2WGJ9 1857 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 GLTPD2A6NH11 291 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 SMARCA5O60264 1052 aaPredicted RBP13.78□□□□□ -0.2
TROAP-204ENST00000546776 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
TROAP-204ENST00000546776 TFCP2Q12800 502 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 OLFM4Q6UX06 510 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 MPNDQ8N594 471 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
TROAP-204ENST00000546776 SBF1O95248 1867 aa13.77□□□□□ -0.21
TROAP-204ENST00000546776 PDE8BO95263 885 aa13.77□□□□□ -0.21
TROAP-204ENST00000546776 PRELPP51888 382 aa13.77□□□□□ -0.21
TROAP-204ENST00000546776 AACSQ86V21 672 aa13.77□□□□□ -0.21
TROAP-204ENST00000546776 LRRC37AA6NMS7 1700 aa13.76□□□□□ -0.21
TROAP-204ENST00000546776 KCNJ4P48050 445 aa13.76□□□□□ -0.21
TROAP-204ENST00000546776 CHRNDQ07001 517 aa13.76□□□□□ -0.21
TROAP-204ENST00000546776 PUM3Q15397 648 aaKnown RBP13.76□□□□□ -0.21
TROAP-204ENST00000546776 TNNI3KQ59H18 835 aa13.76□□□□□ -0.21
TROAP-204ENST00000546776 LARGE2Q8N3Y3 721 aa13.76□□□□□ -0.21
TROAP-204ENST00000546776 MINPP1Q9UNW1 487 aa13.76□□□□□ -0.21
TROAP-204ENST00000546776 FPGT-TNNI3KV9GXZ4 949 aa13.76□□□□□ -0.21
TROAP-204ENST00000546776 ZNF609O15014 1411 aa13.75□□□□□ -0.21
TROAP-204ENST00000546776 PPIP5K2O43314 1243 aa13.75□□□□□ -0.21
TROAP-204ENST00000546776 SLC5A1P13866 664 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms