RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 HDAC5Q9UQL6 1122 aa18.91■□□□□ 0.62
CD9-210ENST00000543916 GNAI2P04899 355 aa18.9■□□□□ 0.62
CD9-210ENST00000543916 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
CD9-210ENST00000543916 RTFDC1Q9BY42 306 aaPredicted RBP18.9■□□□□ 0.62
CD9-210ENST00000543916 RFX5P48382 616 aaPredicted RBP18.89■□□□□ 0.61
CD9-210ENST00000543916 TAF7LQ5H9L4 462 aa18.89■□□□□ 0.61
CD9-210ENST00000543916 KLHDC4Q8TBB5 520 aa18.89■□□□□ 0.61
CD9-210ENST00000543916 C1orf115Q9H7X2 142 aa18.89■□□□□ 0.61
CD9-210ENST00000543916 MINPP1Q9UNW1 487 aa18.89■□□□□ 0.61
CD9-210ENST00000543916 NSFL1CQ9UNZ2 370 aaKnown RBP18.89■□□□□ 0.61
CD9-210ENST00000543916 PODXL2Q9NZ53 605 aa18.88■□□□□ 0.61
CD9-210ENST00000543916 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
CD9-210ENST00000543916 XDHP47989 1333 aa18.87■□□□□ 0.61
CD9-210ENST00000543916 MTX1Q13505 466 aa18.87■□□□□ 0.61
CD9-210ENST00000543916 LDHAL6AQ6ZMR3 332 aa18.87■□□□□ 0.61
CD9-210ENST00000543916 PUS3Q9BZE2 481 aaKnown RBP18.87■□□□□ 0.61
CD9-210ENST00000543916 ANKIB1Q9P2G1 1089 aa18.87■□□□□ 0.61
CD9-210ENST00000543916 POLLQ9UGP5 575 aa18.87■□□□□ 0.61
CD9-210ENST00000543916 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
CD9-210ENST00000543916 WTIPA6NIX2 430 aaPredicted RBP18.86■□□□□ 0.61
CD9-210ENST00000543916 YY1P25490 414 aa18.86■□□□□ 0.61
CD9-210ENST00000543916 PTPN12Q05209 780 aaKnown RBP18.86■□□□□ 0.61
CD9-210ENST00000543916 SUPT20HQ8NEM7 779 aa18.86■□□□□ 0.61
CD9-210ENST00000543916 TBC1D16Q8TBP0 767 aa18.86■□□□□ 0.61
CD9-210ENST00000543916 GPR101Q96P66 508 aaPredicted RBP18.86■□□□□ 0.61
CD9-210ENST00000543916 C6orf229H3BNL8 230 aa18.85■□□□□ 0.61
CD9-210ENST00000543916 UFL1O94874 794 aa18.85■□□□□ 0.61
CD9-210ENST00000543916 CHRNDQ07001 517 aa18.85■□□□□ 0.61
CD9-210ENST00000543916 AOC3Q16853 763 aa18.85■□□□□ 0.61
CD9-210ENST00000543916 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
CD9-210ENST00000543916 CNNM1Q9NRU3 951 aa18.85■□□□□ 0.61
CD9-210ENST00000543916 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
CD9-210ENST00000543916 SRGAP3O43295 1099 aa18.84■□□□□ 0.61
CD9-210ENST00000543916 HELBQ8NG08 1087 aaPredicted RBP18.84■□□□□ 0.61
CD9-210ENST00000543916 ZBTB40Q9NUA8 1239 aa18.84■□□□□ 0.61
CD9-210ENST00000543916 GGA1Q9UJY5 639 aa18.84■□□□□ 0.61
CD9-210ENST00000543916 RIPOR2Q9Y4F9 1068 aa18.84■□□□□ 0.61
CD9-210ENST00000543916 PPIP5K2O43314 1243 aa18.83■□□□□ 0.6
CD9-210ENST00000543916 KIAA2012Q0VF49 1180 aa18.83■□□□□ 0.6
CD9-210ENST00000543916 LARGE2Q8N3Y3 721 aa18.83■□□□□ 0.6
CD9-210ENST00000543916 ANKRD2Q9GZV1 360 aa18.83■□□□□ 0.6
CD9-210ENST00000543916 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.6
CD9-210ENST00000543916 TAF5LO75529 589 aa18.82■□□□□ 0.6
CD9-210ENST00000543916 ATP2B4P23634 1241 aa18.82■□□□□ 0.6
CD9-210ENST00000543916 WASHC4Q2M389 1173 aa18.82■□□□□ 0.6
CD9-210ENST00000543916 VPS33BQ9H267 617 aa18.82■□□□□ 0.6
CD9-210ENST00000543916 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
CD9-210ENST00000543916 ZC3H4Q9UPT8 1303 aaKnown RBP18.81■□□□□ 0.6
CD9-210ENST00000543916 SNAP23O00161 211 aa18.81■□□□□ 0.6
CD9-210ENST00000543916 RIMBP2O15034 1052 aa18.81■□□□□ 0.6
CD9-210ENST00000543916 ATP8B2P98198 1209 aa18.81■□□□□ 0.6
CD9-210ENST00000543916 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
CD9-210ENST00000543916 ATG9AQ7Z3C6 839 aa18.81■□□□□ 0.6
CD9-210ENST00000543916 EYA3Q99504 573 aa18.81■□□□□ 0.6
CD9-210ENST00000543916 SIL1Q9H173 461 aa18.81■□□□□ 0.6
CD9-210ENST00000543916 ZNF804BA4D1E1 1349 aa18.8■□□□□ 0.6
CD9-210ENST00000543916 MROH5Q6ZUA9 1318 aa18.8■□□□□ 0.6
CD9-210ENST00000543916 EYA2O00167 538 aa18.8■□□□□ 0.6
CD9-210ENST00000543916 POLA2Q14181 598 aa18.8■□□□□ 0.6
CD9-210ENST00000543916 COPRSQ9NQ92 184 aa18.8■□□□□ 0.6
CD9-210ENST00000543916 LEMD3Q9Y2U8 911 aa18.8■□□□□ 0.6
CD9-210ENST00000543916 MED23Q9ULK4 1368 aa18.8■□□□□ 0.6
CD9-210ENST00000543916 KLRK1P26718 216 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 METTL24Q5JXM2 366 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 NIM1KQ8IY84 436 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 VGLL2Q8N8G2 317 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 SSH3Q8TE77 659 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 JDP2Q8WYK2 163 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 CRBNQ96SW2 442 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
CD9-210ENST00000543916 ZNF646O15015 1829 aaPredicted RBP18.79■□□□□ 0.6
CD9-210ENST00000543916 PSME4Q14997 1843 aa18.79■□□□□ 0.6
CD9-210ENST00000543916 ZNF541Q9H0D2 1346 aa18.78■□□□□ 0.6
CD9-210ENST00000543916 IRS2Q9Y4H2 1338 aa18.78■□□□□ 0.6
CD9-210ENST00000543916 FZD9O00144 591 aa18.78■□□□□ 0.6
CD9-210ENST00000543916 CIAO1O76071 339 aa18.78■□□□□ 0.6
CD9-210ENST00000543916 TXNRD3Q86VQ6 643 aa18.78■□□□□ 0.6
CD9-210ENST00000543916 ZC3H12CQ9C0D7 883 aaKnown RBP18.78■□□□□ 0.6
CD9-210ENST00000543916 FBXO3Q9UK99 471 aa18.78■□□□□ 0.6
CD9-210ENST00000543916 SCN9AQ15858 1988 aa18.78■□□□□ 0.6
CD9-210ENST00000543916 ARAP2Q8WZ64 1704 aa18.77■□□□□ 0.6
CD9-210ENST00000543916 KCNJ4P48050 445 aa18.77■□□□□ 0.6
CD9-210ENST00000543916 DOK7Q18PE1 504 aa18.77■□□□□ 0.6
CD9-210ENST00000543916 DBNDD1Q9H9R9 158 aa18.77■□□□□ 0.6
CD9-210ENST00000543916 YDJCA8MPS7 323 aa18.76■□□□□ 0.59
CD9-210ENST00000543916 PDE8BO95263 885 aa18.76■□□□□ 0.59
CD9-210ENST00000543916 ZNF526Q8TF50 670 aaPredicted RBP18.76■□□□□ 0.59
CD9-210ENST00000543916 ZNRF3Q9ULT6 936 aa18.76■□□□□ 0.59
CD9-210ENST00000543916 WDR90Q96KV7 1748 aa18.76■□□□□ 0.59
CD9-210ENST00000543916 GLTPD2A6NH11 291 aa18.75■□□□□ 0.59
CD9-210ENST00000543916 ECE2O60344 883 aa18.75■□□□□ 0.59
CD9-210ENST00000543916 IL15P40933 162 aaPredicted RBP18.75■□□□□ 0.59
CD9-210ENST00000543916 UBE4AQ14139 1066 aa18.75■□□□□ 0.59
CD9-210ENST00000543916 SIRT2Q8IXJ6 389 aa18.75■□□□□ 0.59
CD9-210ENST00000543916 ZNF784Q8NCA9 323 aaPredicted RBP18.75■□□□□ 0.59
CD9-210ENST00000543916 C15orf52Q6ZUT6 534 aaKnown RBP18.74■□□□□ 0.59
CD9-210ENST00000543916 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
CD9-210ENST00000543916 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
CD9-210ENST00000543916 FGFR2P21802 821 aa18.73■□□□□ 0.59
CD9-210ENST00000543916 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms