RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
VEGFB-204ENST00000543462 SCN4AP35499 1836 aa12.44□□□□□ -0.42
VEGFB-204ENST00000543462 GNAI2P04899 355 aa12.43□□□□□ -0.42
VEGFB-204ENST00000543462 PTPN12Q05209 780 aaKnown RBP12.43□□□□□ -0.42
VEGFB-204ENST00000543462 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
VEGFB-204ENST00000543462 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
VEGFB-204ENST00000543462 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
VEGFB-204ENST00000543462 POLLQ9UGP5 575 aa12.43□□□□□ -0.42
VEGFB-204ENST00000543462 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
VEGFB-204ENST00000543462 RIPOR2Q9Y4F9 1068 aa12.43□□□□□ -0.42
VEGFB-204ENST00000543462 XDHP47989 1333 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
VEGFB-204ENST00000543462 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
VEGFB-204ENST00000543462 POLA2Q14181 598 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 MPNDQ8N594 471 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-204ENST00000543462 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 VPS33BQ9H267 617 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 ZNF277Q9NRM2 450 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-204ENST00000543462 DDX19BQ9UMR2 479 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 HDAC5Q9UQL6 1122 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 ADAMTSL1Q8N6G6 1762 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 ZNF609O15014 1411 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
VEGFB-204ENST00000543462 PNMA6EA0A0J9YXQ4 647 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
VEGFB-204ENST00000543462 CHRNDQ07001 517 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 KIAA2012Q0VF49 1180 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 DPP8Q6V1X1 898 aaPredicted RBP12.41□□□□□ -0.42
VEGFB-204ENST00000543462 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 PUS3Q9BZE2 481 aaKnown RBP12.41□□□□□ -0.42
VEGFB-204ENST00000543462 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
VEGFB-204ENST00000543462 CIAO1O76071 339 aa12.4□□□□□ -0.42
VEGFB-204ENST00000543462 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
VEGFB-204ENST00000543462 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
VEGFB-204ENST00000543462 C15orf52Q6ZUT6 534 aaKnown RBP12.4□□□□□ -0.42
VEGFB-204ENST00000543462 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
VEGFB-204ENST00000543462 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
VEGFB-204ENST00000543462 FZD9O00144 591 aa12.39□□□□□ -0.43
VEGFB-204ENST00000543462 EYA2O00167 538 aa12.39□□□□□ -0.43
VEGFB-204ENST00000543462 LDHAL6AQ6ZMR3 332 aa12.39□□□□□ -0.43
VEGFB-204ENST00000543462 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
VEGFB-204ENST00000543462 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
VEGFB-204ENST00000543462 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
VEGFB-204ENST00000543462 NSFL1CQ9UNZ2 370 aaKnown RBP12.39□□□□□ -0.43
VEGFB-204ENST00000543462 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
VEGFB-204ENST00000543462 SRGAP3O43295 1099 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 UFL1O94874 794 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 ATP2B4P23634 1241 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 KLRK1P26718 216 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 AOC3Q16853 763 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
VEGFB-204ENST00000543462 ANKRD2Q9GZV1 360 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 GGA1Q9UJY5 639 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
VEGFB-204ENST00000543462 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
VEGFB-204ENST00000543462 MROH5Q6ZUA9 1318 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 YDJCA8MPS7 323 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 SNAP23O00161 211 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 FGFR2P21802 821 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
VEGFB-204ENST00000543462 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
VEGFB-204ENST00000543462 TAF5LO75529 589 aa12.36□□□□□ -0.43
VEGFB-204ENST00000543462 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
VEGFB-204ENST00000543462 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
VEGFB-204ENST00000543462 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
VEGFB-204ENST00000543462 CNNM1Q9NRU3 951 aa12.36□□□□□ -0.43
VEGFB-204ENST00000543462 ANKIB1Q9P2G1 1089 aa12.36□□□□□ -0.43
VEGFB-204ENST00000543462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.36□□□□□ -0.43
VEGFB-204ENST00000543462 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
VEGFB-204ENST00000543462 PDE8BO95263 885 aa12.35□□□□□ -0.43
VEGFB-204ENST00000543462 YY1P25490 414 aa12.35□□□□□ -0.43
VEGFB-204ENST00000543462 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
VEGFB-204ENST00000543462 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
VEGFB-204ENST00000543462 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
VEGFB-204ENST00000543462 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
VEGFB-204ENST00000543462 EYA3Q99504 573 aa12.35□□□□□ -0.43
VEGFB-204ENST00000543462 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
VEGFB-204ENST00000543462 GLTPD2A6NH11 291 aa12.34□□□□□ -0.43
VEGFB-204ENST00000543462 C6orf229H3BNL8 230 aa12.34□□□□□ -0.43
VEGFB-204ENST00000543462 ZBTB22O15209 634 aa12.34□□□□□ -0.43
VEGFB-204ENST00000543462 IL15P40933 162 aaPredicted RBP12.34□□□□□ -0.43
VEGFB-204ENST00000543462 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
VEGFB-204ENST00000543462 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
VEGFB-204ENST00000543462 L3MBTL3Q96JM7 780 aaPredicted RBP12.34□□□□□ -0.43
VEGFB-204ENST00000543462 SIL1Q9H173 461 aa12.34□□□□□ -0.43
VEGFB-204ENST00000543462 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
VEGFB-204ENST00000543462 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
VEGFB-204ENST00000543462 SUPT16HQ9Y5B9 1047 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms