RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 SKILP12757 684 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 SRLQ86TD4 932 aa13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 CCAR2Q8N163 923 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-221ENST00000537934 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 GYS2P54840 703 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 ST5P78524 1137 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 TMCO3Q6UWJ1 677 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 FILIP1Q7Z7B0 1213 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 ARGLU1Q9NWB6 273 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 CCDC93Q567U6 631 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 G2E3Q7L622 706 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 FBXO18Q8NFZ0 1043 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 GOLGA5Q8TBA6 731 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 DDX54Q8TDD1 881 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 SMC3Q9UQE7 1217 aa13.32□□□□□ -0.28
SEMA4D-221ENST00000537934 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 CHMLP26374 656 aa13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 CAMK4Q16566 473 aa13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 SARM1Q6SZW1 724 aa13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 TNMDQ9H2S6 317 aa13.31□□□□□ -0.28
SEMA4D-221ENST00000537934 PCDH11XQ9BZA7 1347 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 PCDH11YQ9BZA8 1340 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 APPP05067 770 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 EIF2S2P20042 333 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 MRFAP1L1Q96HT8 127 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 RRP15Q9Y3B9 282 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 CAVIN2O95810 425 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 HSPA4P34932 840 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 IQUBQ8NA54 791 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 TRMT1Q9NXH9 659 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 MTMR6Q9Y217 621 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 EXOC6BQ9Y2D4 811 aa13.3□□□□□ -0.28
SEMA4D-221ENST00000537934 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 ZNF165P49910 485 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 CCZ1BP86790 482 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 CCZ1P86791 482 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 NOM1Q5C9Z4 860 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 HDGFL1Q5TGJ6 251 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 CKAP2LQ8IYA6 745 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 PSD3Q9NYI0 1048 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 LIG1P18858 919 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 ARID5BQ14865 1188 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 CCDC30Q5VVM6 783 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 AK7Q96M32 723 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 STK31Q9BXU1 1019 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 JRKLQ9Y4A0 524 aa13.29□□□□□ -0.28
SEMA4D-221ENST00000537934 TUBB4AP04350 444 aa13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 TTC14Q96N46 770 aa13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 ZNF790Q6PG37 636 aa13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 ZNF622Q969S3 477 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
SEMA4D-221ENST00000537934 OAS2P29728 719 aaKnown RBP13.27□□□□□ -0.28
SEMA4D-221ENST00000537934 SNW1Q13573 536 aaKnown RBP13.27□□□□□ -0.28
SEMA4D-221ENST00000537934 TTC6Q86TZ1 520 aa13.27□□□□□ -0.28
SEMA4D-221ENST00000537934 EXOC4Q96A65 974 aa13.27□□□□□ -0.28
SEMA4D-221ENST00000537934 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.28
SEMA4D-221ENST00000537934 MRC1P22897 1456 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 F6X3S4 739 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 HMMRO75330 724 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 CABP4P57796 275 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 LRRN4CLQ8ND94 238 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 CLSTN2Q9H4D0 955 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 DACT1Q9NYF0 836 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 TUBGCP6Q96RT7 1819 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 NRAPQ86VF7 1730 aa13.27□□□□□ -0.29
SEMA4D-221ENST00000537934 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 ANXA1P04083 346 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 AK2P54819 239 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 KRT85P78386 507 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 REXO1L1PQ8IX06 675 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 GJB2P29033 226 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 MAGEA9P43362 315 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 FLIIQ13045 1269 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 TTC31Q49AM3 519 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 UBXN4Q92575 508 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 CHPF2Q9P2E5 772 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 JCADQ9P266 1359 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 DISP2A7MBM2 1401 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 TPM1P09493 284 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms