RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 DDX60Q8IY21 1712 aaKnown RBP12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 SNED1Q8TER0 1413 aa12.44□□□□□ -0.42
LDLRAD3-206ENST00000534091 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 GRAPQ13588 217 aa12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 SP8Q8IXZ3 490 aa12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 GRAPLQ8TC17 118 aaPredicted RBP12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 ATP6V0A2Q9Y487 856 aa12.43□□□□□ -0.42
LDLRAD3-206ENST00000534091 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 KIF3CO14782 793 aa12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 PDE8AO60658 829 aa12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 BACH2Q9BYV9 841 aa12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 AK9Q5TCS8 1911 aa12.42□□□□□ -0.42
LDLRAD3-206ENST00000534091 TOMM70O94826 608 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 PRELPP51888 382 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 ERC1Q8IUD2 1116 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 WDR90Q96KV7 1748 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 EXOC6BQ9Y2D4 811 aa12.41□□□□□ -0.42
LDLRAD3-206ENST00000534091 LRRC37AA6NMS7 1700 aa12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 VEGFAP15692 232 aaPredicted RBP12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 RFX5P48382 616 aaPredicted RBP12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 FOXO4P98177 505 aa12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 OSBPL3Q9H4L5 887 aa12.4□□□□□ -0.42
LDLRAD3-206ENST00000534091 SALL3Q9BXA9 1300 aa12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 C16orf71Q8IYS4 520 aaPredicted RBP12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 SYNE4Q8N205 404 aa12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 RHPN1Q8TCX5 695 aa12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 JDP2Q8WYK2 163 aa12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 SCN4AP35499 1836 aa12.39□□□□□ -0.43
LDLRAD3-206ENST00000534091 AOX1Q06278 1338 aa12.38□□□□□ -0.43
LDLRAD3-206ENST00000534091 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
LDLRAD3-206ENST00000534091 FZD9O00144 591 aa12.38□□□□□ -0.43
LDLRAD3-206ENST00000534091 FSTL1Q12841 308 aa12.38□□□□□ -0.43
LDLRAD3-206ENST00000534091 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
LDLRAD3-206ENST00000534091 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
LDLRAD3-206ENST00000534091 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 CSF1RP07333 972 aa12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 RPS8P62241 208 aaKnown RBP12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 PTPN12Q05209 780 aaKnown RBP12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 MPNDQ8N594 471 aa12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 NMRK2Q9NPI5 230 aa12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
LDLRAD3-206ENST00000534091 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.43
LDLRAD3-206ENST00000534091 TTC22Q5TAA0 569 aa12.36□□□□□ -0.43
LDLRAD3-206ENST00000534091 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
LDLRAD3-206ENST00000534091 JARID2Q92833 1246 aaPredicted RBP12.36□□□□□ -0.43
LDLRAD3-206ENST00000534091 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
LDLRAD3-206ENST00000534091 STAP2Q9UGK3 403 aa12.36□□□□□ -0.43
LDLRAD3-206ENST00000534091 PA2G4Q9UQ80 394 aaKnown RBP12.36□□□□□ -0.43
LDLRAD3-206ENST00000534091 CIAO1O76071 339 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 PDE1AP54750 535 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 CTSWP56202 376 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 OS9Q13438 667 aaPredicted RBP12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 GPC2Q8N158 579 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 EYA3Q99504 573 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 RRAGCQ9HB90 399 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
LDLRAD3-206ENST00000534091 APBB1O00213 710 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 SASH1O94885 1247 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 MX1P20591 662 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 NIM1KQ8IY84 436 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 CLASRPQ8N2M8 674 aaKnown RBP12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 SMC1BQ8NDV3 1235 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 TTLL11Q8NHH1 800 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 TTC41PQ6P2S7 1318 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 TAF1P21675 1872 aa12.34□□□□□ -0.43
LDLRAD3-206ENST00000534091 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 SPEF2Q9C093 1822 aa12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms