RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 SUPT20HQ8NEM7 779 aa18.2■□□□□ 0.5
SF3B2-214ENST00000533595 RTFDC1Q9BY42 306 aaPredicted RBP18.2■□□□□ 0.5
SF3B2-214ENST00000533595 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
SF3B2-214ENST00000533595 SBF1O95248 1867 aa18.2■□□□□ 0.5
SF3B2-214ENST00000533595 RFX5P48382 616 aaPredicted RBP18.19■□□□□ 0.5
SF3B2-214ENST00000533595 PRELPP51888 382 aa18.19■□□□□ 0.5
SF3B2-214ENST00000533595 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
SF3B2-214ENST00000533595 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
SF3B2-214ENST00000533595 CNNM1Q9NRU3 951 aa18.19■□□□□ 0.5
SF3B2-214ENST00000533595 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
SF3B2-214ENST00000533595 RNF181Q9P0P0 153 aa18.19■□□□□ 0.5
SF3B2-214ENST00000533595 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
SF3B2-214ENST00000533595 XDHP47989 1333 aa18.19■□□□□ 0.5
SF3B2-214ENST00000533595 SRGAP3O43295 1099 aa18.18■□□□□ 0.5
SF3B2-214ENST00000533595 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
SF3B2-214ENST00000533595 ANKRD2Q9GZV1 360 aa18.18■□□□□ 0.5
SF3B2-214ENST00000533595 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
SF3B2-214ENST00000533595 C6orf229H3BNL8 230 aa18.17■□□□□ 0.5
SF3B2-214ENST00000533595 IARSP41252 1262 aaKnown RBP18.17■□□□□ 0.5
SF3B2-214ENST00000533595 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
SF3B2-214ENST00000533595 CHRNDQ07001 517 aa18.17■□□□□ 0.5
SF3B2-214ENST00000533595 PUS3Q9BZE2 481 aaKnown RBP18.17■□□□□ 0.5
SF3B2-214ENST00000533595 VPS33BQ9H267 617 aa18.17■□□□□ 0.5
SF3B2-214ENST00000533595 POLLQ9UGP5 575 aa18.17■□□□□ 0.5
SF3B2-214ENST00000533595 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
SF3B2-214ENST00000533595 CCDC88AQ3V6T2 1871 aa18.17■□□□□ 0.5
SF3B2-214ENST00000533595 LTBP1Q14766 1721 aa18.16■□□□□ 0.5
SF3B2-214ENST00000533595 UFL1O94874 794 aa18.16■□□□□ 0.5
SF3B2-214ENST00000533595 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
SF3B2-214ENST00000533595 ATP8B2P98198 1209 aa18.16■□□□□ 0.5
SF3B2-214ENST00000533595 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
SF3B2-214ENST00000533595 DUOX1Q9NRD9 1551 aa18.16■□□□□ 0.5
SF3B2-214ENST00000533595 PNMA6EA0A0J9YXQ4 647 aa18.15■□□□□ 0.5
SF3B2-214ENST00000533595 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
SF3B2-214ENST00000533595 LRRC24Q50LG9 513 aa18.15■□□□□ 0.5
SF3B2-214ENST00000533595 COPRSQ9NQ92 184 aa18.15■□□□□ 0.5
SF3B2-214ENST00000533595 FBXO3Q9UK99 471 aa18.15■□□□□ 0.5
SF3B2-214ENST00000533595 RIPOR2Q9Y4F9 1068 aa18.15■□□□□ 0.5
SF3B2-214ENST00000533595 EYA2O00167 538 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 KIAA2012Q0VF49 1180 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 AOC3Q16853 763 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 WASHC4Q2M389 1173 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 CEP85Q6P2H3 762 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 LARGE2Q8N3Y3 721 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-214ENST00000533595 EYA3Q99504 573 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 SIL1Q9H173 461 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 PA2G4Q9UQ80 394 aaKnown RBP18.14■□□□□ 0.49
SF3B2-214ENST00000533595 LEMD3Q9Y2U8 911 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 MROH5Q6ZUA9 1318 aa18.14■□□□□ 0.49
SF3B2-214ENST00000533595 DICER1Q9UPY3 1922 aaKnown RBP18.13■□□□□ 0.49
SF3B2-214ENST00000533595 TAF5LO75529 589 aa18.13■□□□□ 0.49
SF3B2-214ENST00000533595 KCNJ4P48050 445 aa18.13■□□□□ 0.49
SF3B2-214ENST00000533595 POLA2Q14181 598 aa18.13■□□□□ 0.49
SF3B2-214ENST00000533595 JDP2Q8WYK2 163 aa18.13■□□□□ 0.49
SF3B2-214ENST00000533595 CRBNQ96SW2 442 aa18.13■□□□□ 0.49
SF3B2-214ENST00000533595 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
SF3B2-214ENST00000533595 RIMBP2O15034 1052 aa18.12■□□□□ 0.49
SF3B2-214ENST00000533595 CIAO1O76071 339 aa18.12■□□□□ 0.49
SF3B2-214ENST00000533595 METTL24Q5JXM2 366 aa18.12■□□□□ 0.49
SF3B2-214ENST00000533595 RPAP2Q8IXW5 612 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-214ENST00000533595 SSH3Q8TE77 659 aa18.12■□□□□ 0.49
SF3B2-214ENST00000533595 GPR101Q96P66 508 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-214ENST00000533595 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
SF3B2-214ENST00000533595 ZNF804BA4D1E1 1349 aa18.12■□□□□ 0.49
SF3B2-214ENST00000533595 WTIPA6NIX2 430 aaPredicted RBP18.11■□□□□ 0.49
SF3B2-214ENST00000533595 ATG9AQ7Z3C6 839 aa18.11■□□□□ 0.49
SF3B2-214ENST00000533595 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
SF3B2-214ENST00000533595 A0A1B0GUL6 1792 aa18.1■□□□□ 0.49
SF3B2-214ENST00000533595 TIAM2Q8IVF5 1701 aa18.1■□□□□ 0.49
SF3B2-214ENST00000533595 MED23Q9ULK4 1368 aa18.1■□□□□ 0.49
SF3B2-214ENST00000533595 IL15P40933 162 aaPredicted RBP18.1■□□□□ 0.49
SF3B2-214ENST00000533595 COL4A5P29400 1685 aa18.09■□□□□ 0.49
SF3B2-214ENST00000533595 SNAP23O00161 211 aa18.09■□□□□ 0.49
SF3B2-214ENST00000533595 HMMRO75330 724 aa18.09■□□□□ 0.49
SF3B2-214ENST00000533595 PDE8BO95263 885 aa18.09■□□□□ 0.49
SF3B2-214ENST00000533595 UBE4AQ14139 1066 aa18.09■□□□□ 0.49
SF3B2-214ENST00000533595 VGLL2Q8N8G2 317 aa18.09■□□□□ 0.49
SF3B2-214ENST00000533595 CEP126Q9P2H0 1117 aa18.09■□□□□ 0.49
SF3B2-214ENST00000533595 G3V3G9 751 aa18.08■□□□□ 0.48
SF3B2-214ENST00000533595 FZD9O00144 591 aa18.08■□□□□ 0.48
SF3B2-214ENST00000533595 G3BP1Q13283 466 aaKnown RBP eCLIP18.08■□□□□ 0.489e-7■□□□□ 10.1
SF3B2-214ENST00000533595 DCAF8Q5TAQ9 597 aa18.08■□□□□ 0.48
SF3B2-214ENST00000533595 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
SF3B2-214ENST00000533595 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
SF3B2-214ENST00000533595 DOK7Q18PE1 504 aa18.07■□□□□ 0.48
SF3B2-214ENST00000533595 SIRT2Q8IXJ6 389 aa18.07■□□□□ 0.48
SF3B2-214ENST00000533595 DBNDD1Q9H9R9 158 aa18.07■□□□□ 0.48
SF3B2-214ENST00000533595 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
SF3B2-214ENST00000533595 KLRK1P26718 216 aa18.06■□□□□ 0.48
SF3B2-214ENST00000533595 EIF6P56537 245 aaKnown RBP18.06■□□□□ 0.48
SF3B2-214ENST00000533595 OS9Q13438 667 aaPredicted RBP18.06■□□□□ 0.48
SF3B2-214ENST00000533595 PUM3Q15397 648 aaKnown RBP18.06■□□□□ 0.48
SF3B2-214ENST00000533595 DPY19L2Q6NUT2 758 aa18.06■□□□□ 0.48
SF3B2-214ENST00000533595 C15orf52Q6ZUT6 534 aaKnown RBP18.06■□□□□ 0.48
SF3B2-214ENST00000533595 TXNRD3Q86VQ6 643 aa18.06■□□□□ 0.48
SF3B2-214ENST00000533595 NOP58Q9Y2X3 529 aaKnown RBP18.06■□□□□ 0.48
SF3B2-214ENST00000533595 ECE2O60344 883 aa18.05■□□□□ 0.48
SF3B2-214ENST00000533595 AAMPQ13685 434 aa18.05■□□□□ 0.48
SF3B2-214ENST00000533595 ZNF541Q9H0D2 1346 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms