RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 TMEM57Q8N5G2 664 aa18.29■□□□□ 0.52
CSRP1-217ENST00000533188 MEIS3Q99687 375 aa18.29■□□□□ 0.52
CSRP1-217ENST00000533188 ADAMTSL1Q8N6G6 1762 aa18.28■□□□□ 0.52
CSRP1-217ENST00000533188 CC2D2BQ6DHV5 1058 aa18.28■□□□□ 0.52
CSRP1-217ENST00000533188 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
CSRP1-217ENST00000533188 SP8Q8IXZ3 490 aa18.28■□□□□ 0.52
CSRP1-217ENST00000533188 FTSJ3Q8IY81 847 aaKnown RBP18.28■□□□□ 0.52
CSRP1-217ENST00000533188 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
CSRP1-217ENST00000533188 CDC5LQ99459 802 aaKnown RBP18.28■□□□□ 0.52
CSRP1-217ENST00000533188 IFFO2Q5TF58 517 aa18.27■□□□□ 0.52
CSRP1-217ENST00000533188 TMC4Q7Z404 712 aa18.27■□□□□ 0.52
CSRP1-217ENST00000533188 TAF1DQ9H5J8 278 aaPredicted RBP18.27■□□□□ 0.52
CSRP1-217ENST00000533188 PLIN1O60240 522 aa18.26■□□□□ 0.51
CSRP1-217ENST00000533188 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
CSRP1-217ENST00000533188 GPSM2P81274 684 aa18.26■□□□□ 0.51
CSRP1-217ENST00000533188 CHADLQ6NUI6 762 aa18.26■□□□□ 0.51
CSRP1-217ENST00000533188 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
CSRP1-217ENST00000533188 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
CSRP1-217ENST00000533188 RABL6Q3YEC7 729 aaPredicted RBP18.25■□□□□ 0.51
CSRP1-217ENST00000533188 DPP8Q6V1X1 898 aaPredicted RBP18.25■□□□□ 0.51
CSRP1-217ENST00000533188 PANK1Q8TE04 598 aa18.25■□□□□ 0.51
CSRP1-217ENST00000533188 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
CSRP1-217ENST00000533188 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
CSRP1-217ENST00000533188 IQCA1LA6NCM1 817 aa18.24■□□□□ 0.51
CSRP1-217ENST00000533188 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
CSRP1-217ENST00000533188 MPNDQ8N594 471 aa18.24■□□□□ 0.51
CSRP1-217ENST00000533188 ZNF594Q96JF6 807 aaPredicted RBP18.24■□□□□ 0.51
CSRP1-217ENST00000533188 LRRFIP2Q9Y608 721 aaKnown RBP18.24■□□□□ 0.51
CSRP1-217ENST00000533188 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
CSRP1-217ENST00000533188 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
CSRP1-217ENST00000533188 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
CSRP1-217ENST00000533188 LDHDQ86WU2 507 aa18.23■□□□□ 0.51
CSRP1-217ENST00000533188 GPR101Q96P66 508 aaPredicted RBP18.23■□□□□ 0.51
CSRP1-217ENST00000533188 RTFDC1Q9BY42 306 aaPredicted RBP18.23■□□□□ 0.51
CSRP1-217ENST00000533188 BSDC1Q9NW68 430 aaPredicted RBP18.23■□□□□ 0.51
CSRP1-217ENST00000533188 AOC3Q16853 763 aa18.22■□□□□ 0.51
CSRP1-217ENST00000533188 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
CSRP1-217ENST00000533188 GPC2Q8N158 579 aa18.22■□□□□ 0.51
CSRP1-217ENST00000533188 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
CSRP1-217ENST00000533188 ZNF646O15015 1829 aaPredicted RBP18.21■□□□□ 0.51
CSRP1-217ENST00000533188 PSME4Q14997 1843 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 SCN9AQ15858 1988 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 ITGBL1O95965 494 aaPredicted RBP18.21■□□□□ 0.51
CSRP1-217ENST00000533188 GNAI3P08754 354 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 C20orf194Q5TEA3 1177 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 POLLQ9UGP5 575 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 HACL1Q9UJ83 578 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 MINPP1Q9UNW1 487 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 XDHP47989 1333 aa18.21■□□□□ 0.51
CSRP1-217ENST00000533188 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 UFL1O94874 794 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 EPHX2P34913 555 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 KLHDC4Q8TBB5 520 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 TBC1D16Q8TBP0 767 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 JDP2Q8WYK2 163 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 ANKIB1Q9P2G1 1089 aa18.2■□□□□ 0.5
CSRP1-217ENST00000533188 WTIPA6NIX2 430 aaPredicted RBP18.19■□□□□ 0.5
CSRP1-217ENST00000533188 LARGE2Q8N3Y3 721 aa18.19■□□□□ 0.5
CSRP1-217ENST00000533188 SUPT20HQ8NEM7 779 aa18.19■□□□□ 0.5
CSRP1-217ENST00000533188 PUS3Q9BZE2 481 aaKnown RBP18.19■□□□□ 0.5
CSRP1-217ENST00000533188 CREBZFQ9NS37 354 aa18.19■□□□□ 0.5
CSRP1-217ENST00000533188 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
CSRP1-217ENST00000533188 RFX5P48382 616 aaPredicted RBP18.18■□□□□ 0.5
CSRP1-217ENST00000533188 SCNN1DP51172 638 aa18.18■□□□□ 0.5
CSRP1-217ENST00000533188 KIAA2012Q0VF49 1180 aa18.18■□□□□ 0.5
CSRP1-217ENST00000533188 EAPPQ56P03 285 aaPredicted RBP18.18■□□□□ 0.5
CSRP1-217ENST00000533188 C1orf115Q9H7X2 142 aa18.18■□□□□ 0.5
CSRP1-217ENST00000533188 GGA1Q9UJY5 639 aa18.18■□□□□ 0.5
CSRP1-217ENST00000533188 EIF6P56537 245 aaKnown RBP18.17■□□□□ 0.5
CSRP1-217ENST00000533188 CHRNDQ07001 517 aa18.17■□□□□ 0.5
CSRP1-217ENST00000533188 LDHAL6AQ6ZMR3 332 aa18.17■□□□□ 0.5
CSRP1-217ENST00000533188 COG6Q9Y2V7 657 aa18.17■□□□□ 0.5
CSRP1-217ENST00000533188 GJA3Q9Y6H8 435 aa18.17■□□□□ 0.5
CSRP1-217ENST00000533188 ARAP2Q8WZ64 1704 aa18.16■□□□□ 0.5
CSRP1-217ENST00000533188 RIMBP2O15034 1052 aa18.16■□□□□ 0.5
CSRP1-217ENST00000533188 GNAI2P04899 355 aa18.16■□□□□ 0.5
CSRP1-217ENST00000533188 MVPQ14764 893 aaKnown RBP18.16■□□□□ 0.5
CSRP1-217ENST00000533188 NIM1KQ8IY84 436 aa18.16■□□□□ 0.5
CSRP1-217ENST00000533188 HELBQ8NG08 1087 aaPredicted RBP18.16■□□□□ 0.5
CSRP1-217ENST00000533188 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
CSRP1-217ENST00000533188 CNNM1Q9NRU3 951 aa18.16■□□□□ 0.5
CSRP1-217ENST00000533188 SNAP23O00161 211 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 ZBTB7BO15156 539 aaPredicted RBP18.15■□□□□ 0.5
CSRP1-217ENST00000533188 TAF5LO75529 589 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 KLRK1P26718 216 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 EPS15P42566 896 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
CSRP1-217ENST00000533188 WASHC4Q2M389 1173 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 LRRC24Q50LG9 513 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
CSRP1-217ENST00000533188 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 MED23Q9ULK4 1368 aa18.15■□□□□ 0.5
CSRP1-217ENST00000533188 MS4A1P11836 297 aa18.14■□□□□ 0.49
CSRP1-217ENST00000533188 ATP2B4P23634 1241 aa18.14■□□□□ 0.49
CSRP1-217ENST00000533188 PTPN12Q05209 780 aaKnown RBP18.14■□□□□ 0.49
CSRP1-217ENST00000533188 COL13A1Q5TAT6 717 aaPredicted RBP18.14■□□□□ 0.49
CSRP1-217ENST00000533188 MAP1SQ66K74 1059 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms