RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	SRGAP3	O43295	1099 aa		11.66	□□□□□ -0.54
NXF1-209	ENST00000531474	SLC51A	Q86UW1	340 aa		11.66	□□□□□ -0.54
NXF1-209	ENST00000531474	ZNF594	Q96JF6	807 aa	Predicted RBP	11.66	□□□□□ -0.54
NXF1-209	ENST00000531474	TMX4	Q9H1E5	349 aa	Predicted RBP	11.66	□□□□□ -0.54
NXF1-209	ENST00000531474	MYH3	P11055	1940 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	DCAF8L1	A6NGE4	600 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	SOGA3	Q5TF21	947 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	OLFM4	Q6UX06	510 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	TMC4	Q7Z404	712 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	MPHOSPH8	Q99549	860 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	DCTPP1	Q9H773	170 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	ATP6V0A2	Q9Y487	856 aa		11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	BRCA1	P38398	1863 aa	Known RBP	11.65	□□□□□ -0.54
NXF1-209	ENST00000531474	PNMA6E	A0A0J9YXQ4	647 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	MTX1	Q13505	466 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	CCDC93	Q567U6	631 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	ANKRD45	Q5TZF3	282 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	CEP85	Q6P2H3	762 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	SP8	Q8IXZ3	490 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	KLHDC4	Q8TBB5	520 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	C7orf43	Q8WVR3	580 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	CNNM1	Q9NRU3	951 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	DAXX	Q9UER7	740 aa	Predicted RBP	11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	NOP58	Q9Y2X3	529 aa	Known RBP	11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	SLX4	Q8IY92	1834 aa		11.64	□□□□□ -0.55
NXF1-209	ENST00000531474	CACNA1S	Q13698	1873 aa		11.63	□□□□□ -0.55
NXF1-209	ENST00000531474	RFX5	P48382	616 aa	Predicted RBP	11.63	□□□□□ -0.55
NXF1-209	ENST00000531474	CC2D2B	Q6DHV5	1058 aa		11.63	□□□□□ -0.55
NXF1-209	ENST00000531474	LDHAL6A	Q6ZMR3	332 aa		11.63	□□□□□ -0.55
NXF1-209	ENST00000531474	ARHGAP27	Q6ZUM4	889 aa		11.63	□□□□□ -0.55
NXF1-209	ENST00000531474	SKAP1	Q86WV1	359 aa		11.63	□□□□□ -0.55
NXF1-209	ENST00000531474	BSDC1	Q9NW68	430 aa	Predicted RBP	11.63	□□□□□ -0.55
NXF1-209	ENST00000531474	TAF1	P21675	1872 aa		11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	GRIN3B	O60391	1043 aa		11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	GPSM2	P81274	684 aa		11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	ATP8B2	P98198	1209 aa		11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	DPP8	Q6V1X1	898 aa	Predicted RBP	11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	RTKN2	Q8IZC4	609 aa		11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	PUS3	Q9BZE2	481 aa	Known RBP	11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	SIL1	Q9H173	461 aa		11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	PA2G4	Q9UQ80	394 aa	Known RBP	11.62	□□□□□ -0.55
NXF1-209	ENST00000531474	SPEF2	Q9C093	1822 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	PTPN12	Q05209	780 aa	Known RBP	11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	LRRC24	Q50LG9	513 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	SIRT2	Q8IXJ6	389 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	MPND	Q8N594	471 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	SSH3	Q8TE77	659 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	COPRS	Q9NQ92	184 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	ANKIB1	Q9P2G1	1089 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	MINPP1	Q9UNW1	487 aa		11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.61	□□□□□ -0.55
NXF1-209	ENST00000531474	LRRC37A	A6NMS7	1700 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	ARFGEF1	Q9Y6D6	1849 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	EYA2	O00167	538 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	NFKBIE	O00221	500 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	RASSF7	Q02833	373 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	CHRND	Q07001	517 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	POLA2	Q14181	598 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	GRIPAP1	Q4V328	841 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	BMP2KL	Q5H9B9	411 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	METTL24	Q5JXM2	366 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	HELB	Q8NG08	1087 aa	Predicted RBP	11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	ANP32E	Q9BTT0	268 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	ANKRD2	Q9GZV1	360 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	TAOK3	Q9H2K8	898 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	XDH	P47989	1333 aa		11.6	□□□□□ -0.55
NXF1-209	ENST00000531474	C6orf229	H3BNL8	230 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	TAF5L	O75529	589 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	SURF6	O75683	361 aa	Known RBP	11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	CIAO1	O76071	339 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	UFL1	O94874	794 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	KCNJ4	P48050	445 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	OS9	Q13438	667 aa	Predicted RBP	11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	LNPK	Q9C0E8	428 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	GGA1	Q9UJY5	639 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	RIPOR2	Q9Y4F9	1068 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	SNED1	Q8TER0	1413 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	MROH5	Q6ZUA9	1318 aa		11.59	□□□□□ -0.55
NXF1-209	ENST00000531474	SRCAP	Q6ZRS2	3230 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	IL15	P40933	162 aa	Predicted RBP	11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	ATG9A	Q7Z3C6	839 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	SUPT20H	Q8NEM7	779 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	TBC1D16	Q8TBP0	767 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	GPR101	Q96P66	508 aa	Predicted RBP	11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	PSMD1	Q99460	953 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	FBXO3	Q9UK99	471 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	DUOX1	Q9NRD9	1551 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	LTBP3	Q9NS15	1303 aa		11.58	□□□□□ -0.56
NXF1-209	ENST00000531474	ATP2B4	P23634	1241 aa		11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	BECN1	Q14457	450 aa		11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	PODXL2	Q9NZ53	605 aa		11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	CEP126	Q9P2H0	1117 aa		11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	POLL	Q9UGP5	575 aa		11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	EXOC6B	Q9Y2D4	811 aa		11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	LEMD3	Q9Y2U8	911 aa		11.57	□□□□□ -0.56
NXF1-209	ENST00000531474	ZNF804B	A4D1E1	1349 aa		11.57	□□□□□ -0.56

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