RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SCAF8Q9UPN6 1271 aaKnown RBP24.95■■□□□ 1.58
SSRP1-204ENST00000529002 RPS12P25398 132 aaKnown RBP24.94■■□□□ 1.58
SSRP1-204ENST00000529002 SULF1Q8IWU6 871 aa24.94■■□□□ 1.58
SSRP1-204ENST00000529002 FAM89AQ96GI7 184 aa24.94■■□□□ 1.58
SSRP1-204ENST00000529002 HPS5Q9UPZ3 1129 aa24.94■■□□□ 1.58
SSRP1-204ENST00000529002 MAPK8IP3Q9UPT6 1336 aa24.93■■□□□ 1.58
SSRP1-204ENST00000529002 MOB2Q70IA6 237 aa24.93■■□□□ 1.58
SSRP1-204ENST00000529002 ATP5J2-PTCD1G3V325 749 aa24.92■■□□□ 1.58
SSRP1-204ENST00000529002 TBC1D16Q8TBP0 767 aa24.92■■□□□ 1.58
SSRP1-204ENST00000529002 ANGEL2Q5VTE6 544 aaKnown RBP24.91■■□□□ 1.58
SSRP1-204ENST00000529002 VIL1P09327 827 aaKnown RBP24.9■■□□□ 1.58
SSRP1-204ENST00000529002 RIPK4P57078 832 aa24.9■■□□□ 1.58
SSRP1-204ENST00000529002 SF3B3Q15393 1217 aaKnown RBP24.9■■□□□ 1.58
SSRP1-204ENST00000529002 PSME4Q14997 1843 aa24.9■■□□□ 1.58
SSRP1-204ENST00000529002 TBC1D8O95759 1140 aa24.89■■□□□ 1.58
SSRP1-204ENST00000529002 SCARF1Q14162 830 aa24.89■■□□□ 1.58
SSRP1-204ENST00000529002 CHPF2Q9P2E5 772 aa24.89■■□□□ 1.58
SSRP1-204ENST00000529002 EYA3Q99504 573 aa24.88■■□□□ 1.57
SSRP1-204ENST00000529002 ISCA1Q9BUE6 129 aa24.88■■□□□ 1.57
SSRP1-204ENST00000529002 PAPPA2Q9BXP8 1791 aa24.88■■□□□ 1.57
SSRP1-204ENST00000529002 PRAMEF18Q5VWM3 479 aa24.87■■□□□ 1.57
SSRP1-204ENST00000529002 ZNF296Q8WUU4 475 aaPredicted RBP24.87■■□□□ 1.57
SSRP1-204ENST00000529002 SEC31BQ9NQW1 1179 aa24.86■■□□□ 1.57
SSRP1-204ENST00000529002 HDAC9Q9UKV0 1011 aa24.86■■□□□ 1.57
SSRP1-204ENST00000529002 UBE2Q2LH0YL09 131 aa24.85■■□□□ 1.57
SSRP1-204ENST00000529002 RPS8P62241 208 aaKnown RBP24.85■■□□□ 1.57
SSRP1-204ENST00000529002 PLBD2Q8NHP8 589 aa24.85■■□□□ 1.57
SSRP1-204ENST00000529002 ZC3H12CQ9C0D7 883 aaKnown RBP24.85■■□□□ 1.57
SSRP1-204ENST00000529002 UFL1O94874 794 aa24.84■■□□□ 1.57
SSRP1-204ENST00000529002 ZNF280AP59817 542 aaPredicted RBP24.84■■□□□ 1.57
SSRP1-204ENST00000529002 G3V3G9 751 aa24.83■■□□□ 1.57
SSRP1-204ENST00000529002 IRS4O14654 1257 aaPredicted RBP24.83■■□□□ 1.57
SSRP1-204ENST00000529002 MKRN3Q13064 507 aaKnown RBP24.83■■□□□ 1.57
SSRP1-204ENST00000529002 DCAF8Q5TAQ9 597 aa24.83■■□□□ 1.57
SSRP1-204ENST00000529002 RSBN1LQ6PCB5 846 aaPredicted RBP24.83■■□□□ 1.57
SSRP1-204ENST00000529002 ANKRD13DQ6ZTN6 518 aa24.83■■□□□ 1.57
SSRP1-204ENST00000529002 BABAM1Q9NWV8 329 aa24.82■■□□□ 1.56
SSRP1-204ENST00000529002 TMPOP42166 694 aaKnown RBP24.81■■□□□ 1.56
SSRP1-204ENST00000529002 REM2Q8IYK8 340 aaPredicted RBP24.81■■□□□ 1.56
SSRP1-204ENST00000529002 PNNQ9H307 717 aaKnown RBP24.81■■□□□ 1.56
SSRP1-204ENST00000529002 ANKIB1Q9P2G1 1089 aa24.81■■□□□ 1.56
SSRP1-204ENST00000529002 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
SSRP1-204ENST00000529002 NEUROD2Q15784 382 aa24.8■■□□□ 1.56
SSRP1-204ENST00000529002 GMLQ99445 158 aa24.8■■□□□ 1.56
SSRP1-204ENST00000529002 R3HDMLQ9H3Y0 253 aa24.8■■□□□ 1.56
SSRP1-204ENST00000529002 MYOZ2Q9NPC6 264 aa24.8■■□□□ 1.56
SSRP1-204ENST00000529002 PODXL2Q9NZ53 605 aa24.8■■□□□ 1.56
SSRP1-204ENST00000529002 WTIPA6NIX2 430 aaPredicted RBP24.79■■□□□ 1.56
SSRP1-204ENST00000529002 HDGFL1Q5TGJ6 251 aa24.79■■□□□ 1.56
SSRP1-204ENST00000529002 AGBL3Q8NEM8 1001 aa24.79■■□□□ 1.56
SSRP1-204ENST00000529002 JARID2Q92833 1246 aaPredicted RBP24.79■■□□□ 1.56
SSRP1-204ENST00000529002 CCDC85AQ96PX6 553 aaPredicted RBP24.79■■□□□ 1.56
SSRP1-204ENST00000529002 GGA1Q9UJY5 639 aa24.79■■□□□ 1.56
SSRP1-204ENST00000529002 GPR25O00155 361 aa24.78■■□□□ 1.56
SSRP1-204ENST00000529002 FKBP1BP68106 108 aa24.78■■□□□ 1.56
SSRP1-204ENST00000529002 PKN2Q16513 984 aaKnown RBP24.78■■□□□ 1.56
SSRP1-204ENST00000529002 MXD3Q9BW11 206 aa24.78■■□□□ 1.56
SSRP1-204ENST00000529002 ZNF646O15015 1829 aaPredicted RBP24.77■■□□□ 1.56
SSRP1-204ENST00000529002 CHL1O00533 1208 aa24.77■■□□□ 1.56
SSRP1-204ENST00000529002 USP17L8P0C7I0 530 aa24.77■■□□□ 1.56
SSRP1-204ENST00000529002 TTLL12Q14166 644 aaPredicted RBP24.77■■□□□ 1.56
SSRP1-204ENST00000529002 NBPF9Q3BBW0 867 aa24.77■■□□□ 1.56
SSRP1-204ENST00000529002 SPEF2Q9C093 1822 aa24.77■■□□□ 1.56
SSRP1-204ENST00000529002 ZNF609O15014 1411 aa24.76■■□□□ 1.55
SSRP1-204ENST00000529002 FBXO46Q6PJ61 603 aaPredicted RBP24.75■■□□□ 1.55
SSRP1-204ENST00000529002 CCDC146Q8IYE0 955 aa24.75■■□□□ 1.55
SSRP1-204ENST00000529002 TM4SF4P48230 202 aa24.74■■□□□ 1.55
SSRP1-204ENST00000529002 PITPNM2Q9BZ72 1349 aa24.74■■□□□ 1.55
SSRP1-204ENST00000529002 PRKG1Q13976 671 aa24.73■■□□□ 1.55
SSRP1-204ENST00000529002 KIAA0100Q14667 2235 aaKnown RBP24.72■■□□□ 1.55
SSRP1-204ENST00000529002 USP17L3A6NCW0 530 aa24.72■■□□□ 1.55
SSRP1-204ENST00000529002 USP17L4A6NCW7 530 aa24.72■■□□□ 1.55
SSRP1-204ENST00000529002 LMOD3Q0VAK6 560 aa24.72■■□□□ 1.55
SSRP1-204ENST00000529002 TRIM28Q13263 835 aaKnown RBP24.72■■□□□ 1.55
SSRP1-204ENST00000529002 USP17L1Q7RTZ2 530 aa24.72■■□□□ 1.55
SSRP1-204ENST00000529002 ZBTB38Q8NAP3 1195 aaPredicted RBP24.72■■□□□ 1.55
SSRP1-204ENST00000529002 DBF4Q9UBU7 674 aaPredicted RBP24.72■■□□□ 1.55
SSRP1-204ENST00000529002 PTPN12Q05209 780 aaKnown RBP24.71■■□□□ 1.55
SSRP1-204ENST00000529002 FZD1Q9UP38 647 aa24.71■■□□□ 1.55
SSRP1-204ENST00000529002 TRIM35Q9UPQ4 493 aa24.71■■□□□ 1.55
SSRP1-204ENST00000529002 FKTNO75072 461 aa24.7■■□□□ 1.54
SSRP1-204ENST00000529002 PHAXQ9H814 394 aaKnown RBP24.7■■□□□ 1.54
SSRP1-204ENST00000529002 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.7■■□□□ 1.54
SSRP1-204ENST00000529002 DUSP27Q5VZP5 1158 aa24.69■■□□□ 1.54
SSRP1-204ENST00000529002 RIC3Q7Z5B4 369 aa24.69■■□□□ 1.54
SSRP1-204ENST00000529002 MYD88Q99836 296 aa24.69■■□□□ 1.54
SSRP1-204ENST00000529002 HYPKQ9NX55 129 aa24.69■■□□□ 1.54
SSRP1-204ENST00000529002 XDHP47989 1333 aa24.68■■□□□ 1.54
SSRP1-204ENST00000529002 POTEFA5A3E0 1075 aa24.68■■□□□ 1.54
SSRP1-204ENST00000529002 SASH1O94885 1247 aa24.68■■□□□ 1.54
SSRP1-204ENST00000529002 CCDC152Q4G0S7 254 aa24.68■■□□□ 1.54
SSRP1-204ENST00000529002 FBXW7Q969H0 707 aa24.68■■□□□ 1.54
SSRP1-204ENST00000529002 WNT10BO00744 389 aa24.67■■□□□ 1.54
SSRP1-204ENST00000529002 NOM1Q5C9Z4 860 aaKnown RBP24.67■■□□□ 1.54
SSRP1-204ENST00000529002 HABP4Q5JVS0 413 aaKnown RBP24.67■■□□□ 1.54
SSRP1-204ENST00000529002 PODNQ7Z5L7 613 aa24.67■■□□□ 1.54
SSRP1-204ENST00000529002 MKI67P46013 3256 aaKnown RBP24.66■■□□□ 1.54
SSRP1-204ENST00000529002 ATP2B4P23634 1241 aa24.66■■□□□ 1.54
SSRP1-204ENST00000529002 DACT2Q5SW24 774 aa24.66■■□□□ 1.54
SSRP1-204ENST00000529002 ANKRD18AQ8IVF6 992 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms