RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 POLLQ9UGP5 575 aa16.15■□□□□ 0.18
SCN3B-205ENST00000528267 SNAP23O00161 211 aa16.14■□□□□ 0.17
SCN3B-205ENST00000528267 PTPN12Q05209 780 aaKnown RBP16.14■□□□□ 0.17
SCN3B-205ENST00000528267 MTX1Q13505 466 aa16.14■□□□□ 0.17
SCN3B-205ENST00000528267 LRRC24Q50LG9 513 aa16.14■□□□□ 0.17
SCN3B-205ENST00000528267 MPNDQ8N594 471 aa16.14■□□□□ 0.17
SCN3B-205ENST00000528267 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.17
SCN3B-205ENST00000528267 RNF181Q9P0P0 153 aa16.14■□□□□ 0.17
SCN3B-205ENST00000528267 SCN9AQ15858 1988 aa16.14■□□□□ 0.17
SCN3B-205ENST00000528267 GNAI2P04899 355 aa16.13■□□□□ 0.17
SCN3B-205ENST00000528267 LMNB1P20700 586 aa16.13■□□□□ 0.17
SCN3B-205ENST00000528267 IGHMBP2P38935 993 aaKnown RBP16.13■□□□□ 0.17
SCN3B-205ENST00000528267 CHRNDQ07001 517 aa16.13■□□□□ 0.17
SCN3B-205ENST00000528267 CCDC57Q2TAC2 916 aa16.13■□□□□ 0.17
SCN3B-205ENST00000528267 DPP8Q6V1X1 898 aaPredicted RBP16.13■□□□□ 0.17
SCN3B-205ENST00000528267 TBC1D16Q8TBP0 767 aa16.13■□□□□ 0.17
SCN3B-205ENST00000528267 NSFL1CQ9UNZ2 370 aaKnown RBP16.13■□□□□ 0.17
SCN3B-205ENST00000528267 PA2G4Q9UQ80 394 aaKnown RBP16.13■□□□□ 0.17
SCN3B-205ENST00000528267 IRS2Q9Y4H2 1338 aa16.13■□□□□ 0.17
SCN3B-205ENST00000528267 KLRK1P26718 216 aa16.12■□□□□ 0.17
SCN3B-205ENST00000528267 IARSP41252 1262 aaKnown RBP16.12■□□□□ 0.17
SCN3B-205ENST00000528267 AOC3Q16853 763 aa16.12■□□□□ 0.17
SCN3B-205ENST00000528267 HELBQ8NG08 1087 aaPredicted RBP16.12■□□□□ 0.17
SCN3B-205ENST00000528267 ZBTB40Q9NUA8 1239 aa16.12■□□□□ 0.17
SCN3B-205ENST00000528267 RIPOR2Q9Y4F9 1068 aa16.12■□□□□ 0.17
SCN3B-205ENST00000528267 PSME4Q14997 1843 aa16.11■□□□□ 0.17
SCN3B-205ENST00000528267 TAF5LO75529 589 aa16.11■□□□□ 0.17
SCN3B-205ENST00000528267 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
SCN3B-205ENST00000528267 MS4A1P11836 297 aa16.11■□□□□ 0.17
SCN3B-205ENST00000528267 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.11■□□□□ 0.17
SCN3B-205ENST00000528267 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
SCN3B-205ENST00000528267 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
SCN3B-205ENST00000528267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.11■□□□□ 0.17
SCN3B-205ENST00000528267 POLA2Q14181 598 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 LDHAL6AQ6ZMR3 332 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 ATG9AQ7Z3C6 839 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 TXNRD3Q86VQ6 643 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 SIRT2Q8IXJ6 389 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 VGLL2Q8N8G2 317 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 XDHP47989 1333 aa16.1■□□□□ 0.17
SCN3B-205ENST00000528267 ARAP2Q8WZ64 1704 aa16.09■□□□□ 0.17
SCN3B-205ENST00000528267 SRGAP3O43295 1099 aa16.09■□□□□ 0.17
SCN3B-205ENST00000528267 UFL1O94874 794 aa16.09■□□□□ 0.17
SCN3B-205ENST00000528267 KIAA2012Q0VF49 1180 aa16.09■□□□□ 0.17
SCN3B-205ENST00000528267 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
SCN3B-205ENST00000528267 ZNF541Q9H0D2 1346 aa16.09■□□□□ 0.17
SCN3B-205ENST00000528267 PPIP5K2O43314 1243 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 YY1P25490 414 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 ATP8B2P98198 1209 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 SIL1Q9H173 461 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 COPRSQ9NQ92 184 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 GGA1Q9UJY5 639 aa16.08■□□□□ 0.16
SCN3B-205ENST00000528267 YDJCA8MPS7 323 aa16.07■□□□□ 0.16
SCN3B-205ENST00000528267 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
SCN3B-205ENST00000528267 EYA2O00167 538 aa16.07■□□□□ 0.16
SCN3B-205ENST00000528267 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
SCN3B-205ENST00000528267 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
SCN3B-205ENST00000528267 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
SCN3B-205ENST00000528267 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
SCN3B-205ENST00000528267 MED23Q9ULK4 1368 aa16.06■□□□□ 0.16
SCN3B-205ENST00000528267 ZNF804BA4D1E1 1349 aa16.06■□□□□ 0.16
SCN3B-205ENST00000528267 FZD9O00144 591 aa16.06■□□□□ 0.16
SCN3B-205ENST00000528267 LARGE2Q8N3Y3 721 aa16.06■□□□□ 0.16
SCN3B-205ENST00000528267 HDAC5Q9UQL6 1122 aa16.06■□□□□ 0.16
SCN3B-205ENST00000528267 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
SCN3B-205ENST00000528267 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
SCN3B-205ENST00000528267 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
SCN3B-205ENST00000528267 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
SCN3B-205ENST00000528267 ANKRD2Q9GZV1 360 aa16.05■□□□□ 0.16
SCN3B-205ENST00000528267 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
SCN3B-205ENST00000528267 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
SCN3B-205ENST00000528267 KCNQ5Q9NR82 932 aa16.05■□□□□ 0.16
SCN3B-205ENST00000528267 MROH5Q6ZUA9 1318 aa16.04■□□□□ 0.16
SCN3B-205ENST00000528267 CIAO1O76071 339 aa16.04■□□□□ 0.16
SCN3B-205ENST00000528267 FGFR2P21802 821 aa16.04■□□□□ 0.16
SCN3B-205ENST00000528267 VPS33BQ9H267 617 aa16.04■□□□□ 0.16
SCN3B-205ENST00000528267 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
SCN3B-205ENST00000528267 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
SCN3B-205ENST00000528267 SASH1O94885 1247 aa16.03■□□□□ 0.16
SCN3B-205ENST00000528267 PDE8BO95263 885 aa16.03■□□□□ 0.16
SCN3B-205ENST00000528267 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
SCN3B-205ENST00000528267 METTL24Q5JXM2 366 aa16.03■□□□□ 0.16
SCN3B-205ENST00000528267 ZNF784Q8NCA9 323 aaPredicted RBP16.03■□□□□ 0.16
SCN3B-205ENST00000528267 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
SCN3B-205ENST00000528267 ECE2O60344 883 aa16.02■□□□□ 0.16
SCN3B-205ENST00000528267 DDNO94850 711 aaPredicted RBP16.02■□□□□ 0.16
SCN3B-205ENST00000528267 C15orf52Q6ZUT6 534 aaKnown RBP16.02■□□□□ 0.16
SCN3B-205ENST00000528267 NIM1KQ8IY84 436 aa16.02■□□□□ 0.16
SCN3B-205ENST00000528267 EXOC6Q8TAG9 804 aa16.02■□□□□ 0.16
SCN3B-205ENST00000528267 ZNF526Q8TF50 670 aaPredicted RBP16.02■□□□□ 0.16
SCN3B-205ENST00000528267 EYA3Q99504 573 aa16.02■□□□□ 0.16
SCN3B-205ENST00000528267 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
SCN3B-205ENST00000528267 POTECB2RU33 542 aa16.01■□□□□ 0.15
SCN3B-205ENST00000528267 CXCL9Q07325 125 aa16.01■□□□□ 0.15
SCN3B-205ENST00000528267 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms