RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 SURF6O75683 361 aaKnown RBP20.5■□□□□ 0.87
CAPN1-205ENST00000526954 RWDD1Q9H446 243 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-205ENST00000526954 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
CAPN1-205ENST00000526954 MROH5Q6ZUA9 1318 aa20.5■□□□□ 0.87
CAPN1-205ENST00000526954 IL15P40933 162 aaPredicted RBP20.49■□□□□ 0.87
CAPN1-205ENST00000526954 G3BP1Q13283 466 aaKnown RBP eCLIP20.49■□□□□ 0.877e-8■■■□□ 15.6
CAPN1-205ENST00000526954 GRIPAP1Q4V328 841 aa20.49■□□□□ 0.87
CAPN1-205ENST00000526954 HSP90AB4PQ58FF6 505 aa20.49■□□□□ 0.87
CAPN1-205ENST00000526954 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
CAPN1-205ENST00000526954 SIL1Q9H173 461 aa20.49■□□□□ 0.87
CAPN1-205ENST00000526954 DCTPP1Q9H773 170 aa20.49■□□□□ 0.87
CAPN1-205ENST00000526954 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
CAPN1-205ENST00000526954 LTBP1Q14766 1721 aa20.49■□□□□ 0.87
CAPN1-205ENST00000526954 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
CAPN1-205ENST00000526954 C21orf2O43822 256 aa20.48■□□□□ 0.87
CAPN1-205ENST00000526954 ANKRD2Q9GZV1 360 aa20.48■□□□□ 0.87
CAPN1-205ENST00000526954 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-205ENST00000526954 CHRNDQ07001 517 aa20.47■□□□□ 0.87
CAPN1-205ENST00000526954 PODXL2Q9NZ53 605 aa20.47■□□□□ 0.87
CAPN1-205ENST00000526954 FER1L6Q2WGJ9 1857 aa20.47■□□□□ 0.87
CAPN1-205ENST00000526954 IGHDP01880 384 aa20.46■□□□□ 0.87
CAPN1-205ENST00000526954 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
CAPN1-205ENST00000526954 OLFM4Q6UX06 510 aa20.46■□□□□ 0.87
CAPN1-205ENST00000526954 SLC51AQ86UW1 340 aa20.46■□□□□ 0.87
CAPN1-205ENST00000526954 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
CAPN1-205ENST00000526954 WWC3Q9ULE0 1092 aa20.46■□□□□ 0.87
CAPN1-205ENST00000526954 EXOC6BQ9Y2D4 811 aa20.46■□□□□ 0.87
CAPN1-205ENST00000526954 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
CAPN1-205ENST00000526954 SASH1O94885 1247 aa20.45■□□□□ 0.86
CAPN1-205ENST00000526954 METTL24Q5JXM2 366 aa20.45■□□□□ 0.86
CAPN1-205ENST00000526954 ERC1Q8IUD2 1116 aa20.45■□□□□ 0.86
CAPN1-205ENST00000526954 RTKN2Q8IZC4 609 aa20.45■□□□□ 0.86
CAPN1-205ENST00000526954 GCC1Q96CN9 775 aa20.45■□□□□ 0.86
CAPN1-205ENST00000526954 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-205ENST00000526954 XDHP47989 1333 aa20.45■□□□□ 0.86
CAPN1-205ENST00000526954 GPSM2P81274 684 aa20.44■□□□□ 0.86
CAPN1-205ENST00000526954 OS9Q13438 667 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-205ENST00000526954 MPNDQ8N594 471 aa20.44■□□□□ 0.86
CAPN1-205ENST00000526954 ANKIB1Q9P2G1 1089 aa20.44■□□□□ 0.86
CAPN1-205ENST00000526954 CEP126Q9P2H0 1117 aa20.44■□□□□ 0.86
CAPN1-205ENST00000526954 NSFL1CQ9UNZ2 370 aaKnown RBP20.44■□□□□ 0.86
CAPN1-205ENST00000526954 PDE8BO95263 885 aa20.43■□□□□ 0.86
CAPN1-205ENST00000526954 YBX3P16989 372 aaKnown RBP eCLIP20.43■□□□□ 0.863e-6■□□□□ 8.2
CAPN1-205ENST00000526954 RTFDC1Q9BY42 306 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-205ENST00000526954 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
CAPN1-205ENST00000526954 LEMD3Q9Y2U8 911 aa20.43■□□□□ 0.86
CAPN1-205ENST00000526954 DUOX1Q9NRD9 1551 aa20.42■□□□□ 0.86
CAPN1-205ENST00000526954 TAF5LO75529 589 aa20.42■□□□□ 0.86
CAPN1-205ENST00000526954 ATP2B4P23634 1241 aa20.42■□□□□ 0.86
CAPN1-205ENST00000526954 DPP8Q6V1X1 898 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-205ENST00000526954 SMC5Q8IY18 1101 aa20.42■□□□□ 0.86
CAPN1-205ENST00000526954 HELBQ8NG08 1087 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-205ENST00000526954 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
CAPN1-205ENST00000526954 PSMD1Q99460 953 aa20.42■□□□□ 0.86
CAPN1-205ENST00000526954 TFCP2Q12800 502 aa20.41■□□□□ 0.86
CAPN1-205ENST00000526954 UBE4AQ14139 1066 aa20.41■□□□□ 0.86
CAPN1-205ENST00000526954 RHPN1Q8TCX5 695 aa20.41■□□□□ 0.86
CAPN1-205ENST00000526954 GPR108Q9NPR9 543 aa20.41■□□□□ 0.86
CAPN1-205ENST00000526954 POLLQ9UGP5 575 aa20.41■□□□□ 0.86
CAPN1-205ENST00000526954 GGA1Q9UJY5 639 aa20.41■□□□□ 0.86
CAPN1-205ENST00000526954 FGFR2P21802 821 aa20.4■□□□□ 0.86
CAPN1-205ENST00000526954 PUM3Q15397 648 aaKnown RBP20.4■□□□□ 0.86
CAPN1-205ENST00000526954 TBC1D16Q8TBP0 767 aa20.4■□□□□ 0.86
CAPN1-205ENST00000526954 LTBP3Q9NS15 1303 aa20.4■□□□□ 0.86
CAPN1-205ENST00000526954 AKAP2Q9Y2D5 859 aa20.4■□□□□ 0.86
CAPN1-205ENST00000526954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-205ENST00000526954 ZNF804BA4D1E1 1349 aa20.39■□□□□ 0.85
CAPN1-205ENST00000526954 UFL1O94874 794 aa20.39■□□□□ 0.85
CAPN1-205ENST00000526954 FKBP4Q02790 459 aaKnown RBP eCLIP20.39■□□□□ 0.85
CAPN1-205ENST00000526954 GPR162Q16538 588 aa20.39■□□□□ 0.85
CAPN1-205ENST00000526954 SUPT20HQ8NEM7 779 aa20.39■□□□□ 0.85
CAPN1-205ENST00000526954 CCDC136Q96JN2 1154 aa20.39■□□□□ 0.85
CAPN1-205ENST00000526954 LRRCC1Q9C099 1032 aa20.39■□□□□ 0.85
CAPN1-205ENST00000526954 GOLGB1Q14789 3259 aaKnown RBP20.39■□□□□ 0.85
CAPN1-205ENST00000526954 KDM2BQ8NHM5 1336 aa20.38■□□□□ 0.85
CAPN1-205ENST00000526954 NFKBIEO00221 500 aa20.38■□□□□ 0.85
CAPN1-205ENST00000526954 C15orf52Q6ZUT6 534 aaKnown RBP20.38■□□□□ 0.85
CAPN1-205ENST00000526954 PELP1Q8IZL8 1130 aaKnown RBP20.38■□□□□ 0.85
CAPN1-205ENST00000526954 LPIN2Q92539 896 aa20.38■□□□□ 0.85
CAPN1-205ENST00000526954 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
CAPN1-205ENST00000526954 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
CAPN1-205ENST00000526954 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-205ENST00000526954 C6orf229H3BNL8 230 aa20.37■□□□□ 0.85
CAPN1-205ENST00000526954 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
CAPN1-205ENST00000526954 KCNJ4P48050 445 aa20.37■□□□□ 0.85
CAPN1-205ENST00000526954 TAOK3Q9H2K8 898 aa20.37■□□□□ 0.85
CAPN1-205ENST00000526954 SBF1O95248 1867 aa20.37■□□□□ 0.85
CAPN1-205ENST00000526954 ZNF609O15014 1411 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 IRS2Q9Y4H2 1338 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 SNAP23O00161 211 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 APBB1O00213 710 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 ATP2B3Q16720 1220 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 TNNI3KQ59H18 835 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 ARHGAP27Q6ZUM4 889 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 EYA3Q99504 573 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 FPGT-TNNI3KV9GXZ4 949 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 CCDC88AQ3V6T2 1871 aa20.36■□□□□ 0.85
CAPN1-205ENST00000526954 MED23Q9ULK4 1368 aa20.35■□□□□ 0.85
CAPN1-205ENST00000526954 A0A1B0GUL7 405 aa20.35■□□□□ 0.85
CAPN1-205ENST00000526954 IFIT1P09914 478 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms